Oncorhynchus mykiss (rainbow trout): 110493834
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Entry
110493834 CDS
T07259
Name
(RefSeq) RNA-binding protein 39 isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
omy03041
]
110493834
Spliceosome [BR:
omy03041
]
Common components
Common spliceosomal components
General mRNP proteins
110493834
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
PRP38_assoc
RBD_DEAH11
RRM_7
RSRP
Motif
Other DBs
NCBI-GeneID:
110493834
NCBI-ProteinID:
XP_021424011
Ensembl:
ENSOMYG00000018961
UniProt:
A0A8C7VR18
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Position
17:complement(43290328..43319713)
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AA seq
529 aa
AA seq
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MADDFDIEAMLEAPYRKDEIKPSSPNGHEERSKKKKKSRSRSKDRKRSKSRDRKKSHDHK
RSRSRERKRSRSKERRRSRTRSRERSGRYRDHKTTFSGPKFNGGSRGKIGPPPVIKLSRR
RSRSRSPFKKEKSPVRQPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSAVGKVRDVR
MISDRNSRRSKGIAYIEFVEANSVPLAIGLSGQRLLGVPIIVQASQVMAEKNRAAAMANN
LQKGNAGPMRLYVGSLHFNITEEMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDA
ECAKKALEQLNGFELAGRPMKVGHVTERTDASTASSFLDSDELERTGIDLGTTGRLQLMA
RLAEGTGLQIPPAAQQALQMSGAIAIGAMAAVSAAMNPAMNMNMNMNMNTAMNLPSQPLA
THCFQLSNMFNPQSEDDPGWDVDIQHDVIEECNKHGGVVHIYVDKNSTEGNVYVKCPTIP
AAMAAVNALHGRYFAGKMITAAYVPLPTYHNLFPDSVTATQLLIPPARR
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgactttgatatagaagcaatgcttgaggctccgtatagaaaggatgagatc
aagcccagtagtcccaatggccatgaggagcgcagcaagaagaaaaagaagagcaggagc
cgaagcaaagaccggaagagaagcaagagccgtgatcgcaagaagagccatgaccacaag
aggagccgcagccgcgagcgaaagcggagccgcagcaaggagaggcgccggagccgcacc
cggagcagggagcgcagcggccgctacagggaccacaagactaccttctctgggccgaaa
tttaacggtggttccagagggaagattggccctccacctgtcatcaagctaagccgaagg
cgttccagaagccgaagccctttcaagaaagagaagagtcctgtgaggcagccaattgac
aacctgactccagaggaaagggatgctcgcactgtgttttgcatgcagctggcagccaga
atccgtccacgagacctggaagagttcttctctgcagtgggaaaagtgagagatgtgcgc
atgatctctgacagaaattcgaggaggtcgaagggaatagcttacattgagtttgtggag
gccaactctgtgccgctggctataggattgtctggtcagcgacttctgggggtgccaatc
attgttcaggcctcgcaggtaatggctgaaaaaaacagggctgctgccatggccaacaac
ctgcagaagggcaacgctggaccgatgaggctctacgtcggatccttacactttaacatc
acagaggagatgctgagaggaatttttgagccttttggaaggattgagagtattcagctc
atgatggacagtgagactggaagatctaaaggatatggcttcatcactttctcggacgca
gagtgtgccaagaaggccctggagcagttgaacgggtttgagctggccggccggcccatg
aaggtgggccatgtcacggagcgcacagatgcctccaccgccagttcattcctggacagt
gacgagctggagaggacgggcattgacctaggcaccaccgggcgcctgcagctcatggcc
agactggctgaaggcacgggactgcaaattcctccagccgcacagcaagccctacagatg
agtggggccattgctattggtgccatggctgctgtatcagctgccatgaatcctgctatg
aacatgaacatgaatatgaacatgaatacagctatgaacttgccatcccagccacttgct
acacactgtttccagctgtctaacatgttcaaccctcagtctgaagatgacccaggctgg
gatgttgacattcagcatgatgtcattgaggaatgcaacaaacatggaggagttgtgcac
atatacgtcgataagaattccactgaaggcaacgtgtatgtgaaatgtccaaccattcct
gctgccatggctgcagtaaacgcattacatggtcgatattttgcaggtaaaatgatcaca
gcggcatacgtccctctcccgacatatcacaacctttttcctgattctgtgacggctacc
cagctcctgatccctcctgctcgccgatga
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