Oncorhynchus mykiss (rainbow trout): 110493862
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Entry
110493862 CDS
T07259
Symbol
rbl1
Name
(RefSeq) retinoblastoma-like protein 1 isoform X1
KO
K04681
retinoblastoma-like protein 1
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04110
Cell cycle
omy04218
Cellular senescence
omy04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
110493862 (rbl1)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
110493862 (rbl1)
04218 Cellular senescence
110493862 (rbl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omy03000
]
110493862 (rbl1)
Transcription factors [BR:
omy03000
]
Eukaryotic type
Other transcription factors
Pocket domain Rb
110493862 (rbl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RB_A
RB_B
DUF3452
TFIIB
Motif
Other DBs
NCBI-GeneID:
110493862
NCBI-ProteinID:
XP_021424072
UniProt:
A0A8K9Y394
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All DBs
Position
17:37538220..37588797
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AA seq
1089 aa
AA seq
DB search
MTGGVFVVSLDCFVDIDSYIFVLFLCHCNLDLQMRGDESDSDSGRTDESSVRKSLEMLCQ
ELNMDEQTASEAMQNFKSIWNTYTLEGEVVHWLACSLYAACRKGSTPTVGKGVMEGNCVS
LTRILRTSKLSLIQFFNKMKKWSDMSNLSQEFRNRMGRLERTFEVSTVIFRKFEPIFMDM
FQDPQGEPPRQPRSRKHRRLPCHVSDVFKFCWTLFVYTKGNFRMIGDDLVNSYHLLLCCL
DLVFGNALLCSNRKDLVNPLFKGMPSIFRLENNTPDEPPCVIDRLCELHDGLVVEAKGIK
EHYFKPYIKRLFERQILKGNEELLTDLLDTPNFIDNNKAINREYEEYVLTVGDFDERVFL
GADADEEIGTPRKAAPEPRACQLSARMQVESNLQQHFEKKRTLAPSTPLTGRRYLKEKEL
LVTPVSSATQSVSRLQSMVSGLRSAPSEALMQIFKSCSRDPIVAILSRVKTLGETFKQHY
TKDSEELPGSHMDFAENRMKLAEILYYKILENVMAQETRRLHGKDMAVLLEQDIFHCSLM
ACCLEVVLFAYSSQRTFPWIISIFKLRPFYFFKVIEVFIRSEEGLSRDMVKHLNSIEEQV
LECRAWTADSVLWEALEQAHNKVPTVEEVNFPSSFDTGSSSAGPSHLPLVALSPIIHPRI
REFRTGLSSARKDIPPSPLSVHDRYSSPAAGSAKRRLFGDDSSSQAQQSPSLAKRLMFTP
GGTLKIDTPTILNMTTANGQQLSIPLQGIKNDLGGITLIQVQTRGEPGSPITAQVLLTAS
PSRPIPAPQAQPDPQQSRPRRTGSLALFFRKVYHLASVRLRDLCVRLDISAELRGKIWTC
FEHSIVQCPELMKDRHLDQLLLCSIYIISKITKEGHTFQDIMKCYRSQPQASSHVYRSVL
IRPSSTREQPSDENMEVDPSGGTSLISAAEKADQSSREEDLAQGEERGDLIQFYNSVYVL
KIKGFALRYAAPSMDNRMEAPPLSPFPSMRAQPLSPRRISQRHSIYVSPHKNGSCLTPNS
AYTYKINGSPSKELTDINRMIRQGGVSRKRAFSMEGDYLGESPTKRVCPESEDVLLKRLQ
DVVSERAHH
NT seq
3270 nt
NT seq
+upstream
nt +downstream
nt
atgaccggtggcgtgtttgtggtgtctctggactgctttgttgacatagatagctatatt
tttgttttatttctctgccactgtaacttagatttacaaatgcggggagacgagtcagat
tccgactccgggcggacggacgagagctccgtccgaaagagcttggaaatgctttgtcag
gagctgaatatggacgaacagacggcatctgaagccatgcaaaacttcaagtcgatttgg
aatacatacacactggagggggaagtagttcattggctagcctgctctctctatgcagcc
tgcagaaagggctccacacccactgtgggtaagggggtgatggaaggcaactgtgtgtcc
ctgactcgaatactcaggacgtcaaaactgagtttgattcagttcttcaacaagatgaag
aaatggtcggatatgtccaacttatctcaggaatttcggaatcgcatgggccgcctggag
agaacctttgaagtgtcaactgtgatctttcggaagtttgagcccatattcatggacatg
ttccaggatcctcaaggggagcccccacgacagcctagaagcagaaaacacaggcgcctg
ccctgtcacgtcagcgatgtattcaaattctgctggaccctgtttgtgtacactaaagga
aatttccgtatgattggcgatgacttggtgaactcataccacctcctgctctgctgcttg
gacttggtgtttggaaatgccctgctatgctccaacaggaaagaccttgtcaacccactt
ttcaaaggcatgcccagcatcttcaggttggaaaacaacaccccggacgagccgccatgt
gtcatcgatcggctgtgtgagctacacgacggcttggtggtggaggccaagggcatcaag
gagcactacttcaagccctacattaaaaggctctttgagcggcagatacttaaagggaat
gaggagctgctcactgatcttctggacacaccaaatttcatagataacaataaagcgata
aaccgggagtatgaggagtatgtgctgactgtgggggactttgacgagagggtgttcctg
ggggcggatgccgatgaggagatcgggacacccaggaaggctgcaccagaaccccgggcc
tgccagctatcagcccgcatgcaggtggagagcaacctgcaacagcactttgagaagaag
cgcaccctggccccctccactcctctgacaggcaggcgttacctgaaggagaaggagcta
ctggtgacccccgtgtcctcggccacgcaaagcgtcagccgactccagagcatggtctcg
ggcctgcgtagcgcccccagcgaggccctgatgcagatattcaagtcatgttcgcgggac
cccatcgtagccattctgagcagagtgaaaaccctgggcgagacgtttaagcaacattac
acaaaggactcagaggagctgcctggatcacacatggattttgctgagaacaggatgaag
ctggctgaaatcctctattacaagatccttgagaacgtcatggcccaagagacaaggagg
ctgcacggcaaagacatggctgtgctgctggagcaggacatcttccactgctctctgatg
gcctgctgtctggaggtggtgctgtttgcatacagctcccagcgcaccttcccctggatc
atcagcatcttcaaactacgaccgttctacttcttcaaggtgattgaggtgttcatccgc
tcggaagagggcctgtcccgggacatggtgaagcacctgaactccatcgaagagcaggtg
ctggagtgccgggcctggacagcagactctgtgctgtgggaggccctggagcaggctcac
aacaaggtccccaccgtggaggaggtgaacttccccagtagttttgacacggggagcagt
agtgctggtccctcccacctccctctggtggccctctcccccatcatccaccctcgcatc
cgcgagtttaggacgggcctgagcagcgcacgcaaagacattcctccgtcgcccttatcc
gtccacgaccgttacagctccccggcggcgggcagtgccaagcggcgtctgtttggggac
gacagcagcagccaggcccagcagtctccgtcccttgccaagaggctcatgttcacaccc
ggcgggacgctgaagatcgacactcccaccatactcaatatgaccacagccaacggccag
cagctcagcatcccactgcaaggtataaagaatgatctgggaggcatcacgctgatccag
gtacagaccaggggggagcccggcagtcccattacagcccaggtcctcttgacagcctcc
cccagccggcccatcccggcaccccaggctcagccagacccccaacagagccggccccga
cgcaccggctccttggccctcttcttcaggaaggtgtaccacctggccagtgtgcggctg
agagatctgtgcgttaggctggacatctcggcagagctgcggggcaagatctggacttgc
tttgagcactccatcgtccagtgtccggagctgatgaaggacagacacctggaccagctc
ctcctttgctccatctacatcatctctaagattacgaaagaaggccacacattccaggac
atcatgaaatgttaccgcagtcaaccacaagccagcagtcatgtctaccgcagtgtcctc
atccgacccagcagcaccagagaacagccctcagacgagaacatggaagtggacccctct
ggtggaacatccttaatttcagctgctgagaaagccgaccagagcagcagagaggaggat
ctcgcccaaggcgaggagcgcggcgacctcatccagttctacaactctgtctatgtgctg
aagattaagggctttgccctacgatacgctgcccccagcatggacaacaggatggaggcc
cctcctttgtccccgttcccctcgatgagagcccagcccctgtccccccgccgcatctct
cagagacactcgatctacgtgtccccacacaagaacggctcctgtctcaccccgaactct
gcctacacctacaagatcaacggcagcccctccaaagaactgactgacatcaaccggatg
atccgccagggaggggtgagcaggaaaagggccttttccatggagggcgactacttgggc
gaatcccccaccaaacgggtgtgtcccgagagcgaggatgtgctgctcaaacggctgcag
gacgtggtcagcgagagagcccaccactga
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