Oncorhynchus mykiss (rainbow trout): 110493904
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Entry
110493904 CDS
T07259
Name
(RefSeq) alpha-1-syntrophin isoform X1
KO
K24063
alpha-syntrophin
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
110493904
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Ortholog
Paralog
GFIT
Motif
Pfam:
Syntrophin_4th
PH_17
PDZ
PH
PDZ_6
PDZ_2
SOS1_NGEF_PH
Motif
Other DBs
NCBI-GeneID:
110493904
NCBI-ProteinID:
XP_021424168
Ensembl:
ENSOMYG00000040147
LinkDB
All DBs
Position
17:42029990..42108742
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AA seq
487 aa
AA seq
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MAATMKAQKTGLLELRVTVDRWIRVLATLTEETLTVSPGEVAEDIVKPNPTPAGAINGDP
ANFSSSPVPETITNVKRTVRVTKQDVGGLGISIKGGKENKMPILISKIFKGLAADQTEAL
YVGDAILSVNSADLRDATHDEAVQALKKTGKEVILEVKYIKEMSAFFKNTSPGAPLPWDS
PPATSQKGAHAPAELKEARTISLKMCQVTRKQCPPDTENRYFEVISSSRKSSVFLRAKDP
VMAQSWYNAIQVGVLGLVPRIRDELRAMQADLEVKHMGWITEQATQGPERPLLALLTERD
LLLYPTLPDTKDSINSPVKSHPLITTRLVHSGPGKSSPLLDSELSFGLRMGTKQGVETHV
FRVNSAKELSTWTHMLVDGCHNAAELIQEVTTACSWNGKECNLGVHINEGFSLFTEEMGI
RKTVLLQQPFERLRMSSDDGVRMIFLDFGGPEAEIVSWTDDCNWTSTPVPRPWCSSSTPS
SPLRSSG
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atggctgccacgatgaaggcacagaaaacgggactgttagaacttcgagttaccgtggac
cgttggatccgtgtattagccacacttacggaggagactttaaccgtgagccccggagag
gtcgccgaagacatagttaaacccaacccaactcctgccggtgccattaacggagacccg
gccaacttcagctcctctccggtcccagaaacaatcaccaacgttaagcgcacggtgcga
gttaccaagcaagatgtgggaggacttggaattagtattaaaggtggaaaagagaacaaa
atgcccattctcatctcgaagatcttcaaggggttggcagctgaccagacggaggccctg
tacgtgggtgacgccatcctgtcggtcaacagcgccgacctccgggacgccacacacgac
gaggccgtgcaggccctgaagaagacgggcaaagaagtcatcctagaggtgaaatacatc
aaggagatgtcggccttttttaagaacacctcccccggtgcacccttaccctgggactcc
ccccctgccacatcacagaaaggcgcacacgcccctgccgagctgaaggaggccaggacc
atatcgctgaaaatgtgccaggtgactaggaaacagtgccccccggacacagagaacagg
tactttgaggtgatctcgtccagcagaaagagctcagtgttcctgagggccaaggacccc
gtcatggcccagtcctggtacaacgccatccaggtcggggtcttgggcctggttccccgc
atcagggatgagttgagggccatgcaggcggacctggaggtcaaacacatgggctggatc
actgaacaggcgacccagggtccagagagaccgttgctggctctgctgactgagagagac
ctgttgctataccccaccctgcctgacactaaagacagcatcaacagcccagtcaagagc
cacccgctcatcacaaccagactggtccactcgggtccggggaagagctctcccctgctg
gattctgagctctcctttgggctgcgcatgggcaccaagcagggtgtagagacccacgtg
ttccgggtgaactcggccaaggagctttcaacctggacccacatgctggtggacggctgc
cacaacgccgcagagctcatccaggaagtcaccacagcctgcagctggaacgggaaggag
tgcaacctgggagttcacatcaacgagggcttttccctgttcaccgaggagatgggcatc
aggaagacggtgctcctccagcagcccttcgagcgcctgcgcatgtcctccgacgacggc
gtgcgcatgatcttcctcgacttcggagggcccgaggcggagattgtgagttggactgat
gactgcaactggacctccactcctgtcccaagaccatggtgttcatcatccactccttcc
tctccgctaaggtcaagcggctag
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