KEGG   Oncorhynchus mykiss (rainbow trout): 110493904
Entry
110493904         CDS       T07259                                 
Name
(RefSeq) alpha-1-syntrophin isoform X1
  KO
K24063  alpha-syntrophin
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Pathway
omy04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:omy00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    110493904
SSDB
Motif
Pfam: Syntrophin_4th PH_17 PDZ PH PDZ_6 PDZ_2 SOS1_NGEF_PH
Other DBs
NCBI-GeneID: 110493904
NCBI-ProteinID: XP_021424168
Ensembl: ENSOMYG00000040147
LinkDB
Position
17:42029990..42108742
AA seq 487 aa
MAATMKAQKTGLLELRVTVDRWIRVLATLTEETLTVSPGEVAEDIVKPNPTPAGAINGDP
ANFSSSPVPETITNVKRTVRVTKQDVGGLGISIKGGKENKMPILISKIFKGLAADQTEAL
YVGDAILSVNSADLRDATHDEAVQALKKTGKEVILEVKYIKEMSAFFKNTSPGAPLPWDS
PPATSQKGAHAPAELKEARTISLKMCQVTRKQCPPDTENRYFEVISSSRKSSVFLRAKDP
VMAQSWYNAIQVGVLGLVPRIRDELRAMQADLEVKHMGWITEQATQGPERPLLALLTERD
LLLYPTLPDTKDSINSPVKSHPLITTRLVHSGPGKSSPLLDSELSFGLRMGTKQGVETHV
FRVNSAKELSTWTHMLVDGCHNAAELIQEVTTACSWNGKECNLGVHINEGFSLFTEEMGI
RKTVLLQQPFERLRMSSDDGVRMIFLDFGGPEAEIVSWTDDCNWTSTPVPRPWCSSSTPS
SPLRSSG
NT seq 1464 nt   +upstreamnt  +downstreamnt
atggctgccacgatgaaggcacagaaaacgggactgttagaacttcgagttaccgtggac
cgttggatccgtgtattagccacacttacggaggagactttaaccgtgagccccggagag
gtcgccgaagacatagttaaacccaacccaactcctgccggtgccattaacggagacccg
gccaacttcagctcctctccggtcccagaaacaatcaccaacgttaagcgcacggtgcga
gttaccaagcaagatgtgggaggacttggaattagtattaaaggtggaaaagagaacaaa
atgcccattctcatctcgaagatcttcaaggggttggcagctgaccagacggaggccctg
tacgtgggtgacgccatcctgtcggtcaacagcgccgacctccgggacgccacacacgac
gaggccgtgcaggccctgaagaagacgggcaaagaagtcatcctagaggtgaaatacatc
aaggagatgtcggccttttttaagaacacctcccccggtgcacccttaccctgggactcc
ccccctgccacatcacagaaaggcgcacacgcccctgccgagctgaaggaggccaggacc
atatcgctgaaaatgtgccaggtgactaggaaacagtgccccccggacacagagaacagg
tactttgaggtgatctcgtccagcagaaagagctcagtgttcctgagggccaaggacccc
gtcatggcccagtcctggtacaacgccatccaggtcggggtcttgggcctggttccccgc
atcagggatgagttgagggccatgcaggcggacctggaggtcaaacacatgggctggatc
actgaacaggcgacccagggtccagagagaccgttgctggctctgctgactgagagagac
ctgttgctataccccaccctgcctgacactaaagacagcatcaacagcccagtcaagagc
cacccgctcatcacaaccagactggtccactcgggtccggggaagagctctcccctgctg
gattctgagctctcctttgggctgcgcatgggcaccaagcagggtgtagagacccacgtg
ttccgggtgaactcggccaaggagctttcaacctggacccacatgctggtggacggctgc
cacaacgccgcagagctcatccaggaagtcaccacagcctgcagctggaacgggaaggag
tgcaacctgggagttcacatcaacgagggcttttccctgttcaccgaggagatgggcatc
aggaagacggtgctcctccagcagcccttcgagcgcctgcgcatgtcctccgacgacggc
gtgcgcatgatcttcctcgacttcggagggcccgaggcggagattgtgagttggactgat
gactgcaactggacctccactcctgtcccaagaccatggtgttcatcatccactccttcc
tctccgctaaggtcaagcggctag

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