Oncorhynchus mykiss (rainbow trout): 110493954
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Entry
110493954 CDS
T07259
Name
(RefSeq) eukaryotic translation initiation factor 4B isoform X1
KO
K03258
translation initiation factor 4B
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
110493954
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omy03019
]
110493954
03012 Translation factors [BR:
omy03012
]
110493954
Messenger RNA biogenesis [BR:
omy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
110493954
mRNA cycle factors
Stress granule specific factors
110493954
Translation factors [BR:
omy03012
]
Eukaryotic type
Initiation factors
eIF-4
110493954
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
Motif
Other DBs
NCBI-GeneID:
110493954
NCBI-ProteinID:
XP_021424250
Ensembl:
ENSOMYG00000045129
LinkDB
All DBs
Position
17:complement(45447284..45500084)
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AA seq
640 aa
AA seq
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MAAAAKKKGNKKGKTLTLTDFLAEDSGSGGNAPPPQPSYAKSTSWADETDDLEGDVSKSW
HTGEDSYRAPAIDRNILPTAPRSAREPNVDRSRLPRSPPYTAFLGNLPYDVSEESIKDFF
RGLAISAVRLPREPSNPERLKGFGYAEFDDVDSLLRALTLNEENLGNRRIRVDIADQSND
KEGRDNGQMGGRDRMGRMGDMAGPDKTDSDDWRARPTADADDGPPKREESAFGSRDRYGD
RDMLRRDNDRGFGDRGGDRDRGFGGRDRYEDRGGENGAFGSRRDRDDGGRRAFGSGYRRD
DDDQSGGGGGSRYGARDRYGGDREGRYERQDEGREERGEVGPTERPKLVLKPRSMAKEEQ
QAGSGGAPPAAPAAARSSGRASIFGAAKPVDTAAKEREVEEKLQRQLEEDQSKGFDRKPR
DRDRDPSWRNEEPPSERSRTGSESSHPGSTSGGRASRRRESERSVENEVFSGKEDDPPSP
VARPSSANSSTFSSKEPLKVMPAPPPKENAWAKRPALSTGSSEGCAPISTSDTAPPKLSL
SSTNERGSNKDENKVDGVHLDRGPPWGRGRAVGRGRGEGANRDRRREEDRKSKRRSRDSR
PAPEPKKYEESPTLKFSSASKYAALLMDREQGDDAENGVE
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcagctaagaaaaaggggaataagaaggggaagactctgaccctcactgac
ttcctcgcagaggacagtgggagtgggggcaatgctccaccaccgcaacccagctacgcc
aagtccaccagctgggctgatgagaccgatgacctggaaggagatgtgtccaagtcctgg
cacacaggggaggacagttaccgggcccccgcaatagaccgtaacatcctgcccacagcg
ccacggtcggcccgtgagccgaatgtggaccgctcacgcctcccccgcagccccccctac
actgccttcctgggcaacctgccctacgacgtctcagaggaatctatcaaggacttcttc
cggggcctagcgatcagtgcggtgcgcttgccacgggagcccagtaacccagagaggctg
aagggctttggctacgcagagtttgacgatgtggactccctcttgagggcactgactctc
aacgaggagaacctgggaaaccgcaggatccgggtggatattgcagatcagtccaatgac
aaggaggggagagacaatggtcagatgggtggacgagaccggatgggccgcatgggagac
atggcaggccccgacaagacagacagtgatgactggagggcccggcccactgcagacgcc
gacgatgggcccccaaagagagaggaatccgcctttgggtcacgcgaccgctacggagac
cgtgacatgctgcgaagggacaacgaccgcggcttcggcgaccgtggcggcgaccgggac
cgcggctttggcggcagagaccgctatgaagaccggggaggtgagaacggagcctttggc
tcccgcagggatagggatgacggagggcgacgtgccttcggcagtgggtaccgccgtgac
gatgacgatcagagtggcggaggtggtggtagccgctatggggcccgggatcgctacggc
ggagaccgggagggccggtacgagaggcaggacgaagggcgcgaggagagaggtgaggtt
ggtcccaccgagaggcccaagctggtcctgaagccgcgcagcatggccaaggaggagcag
caggccggcagcggtggggctcccccagctgctccggcagccgcccgcagctctggtcga
gcctccatctttggagcggccaagcccgtggacacagcggctaaggagcgggaggtggag
gagaagctccagaggcagctggaagaggaccagtccaagggcttcgataggaaacctcgc
gacagagacagggacccaagctggaggaatgaggagccaccttctgagcggtcccgcaca
ggaagtgagtcatcacatcccggaagtacctctggagggagagcctcacggcgcagagag
agcgagcgctcagtggagaacgaagtattcagcggtaaggaggacgaccctccctctccg
gtggctcggccctcttctgccaactcttccaccttctcctccaaggagcccctcaaggtg
atgcctgcaccgccacctaaggagaatgcctgggccaagcggcctgcattgagtaccggg
tccagcgagggatgcgcccctatctctaccagtgacacggcacctcccaaactgagcttg
agttctacaaatgaaagaggatcgaataaggacgagaataaagtggacggtgtgcatctg
gaccggggccccccatgggggagagggcgggccgtagggcggggccgaggagagggggcc
aacagagaccgacgaagggaggaagacagaaagtctaaaagaagaagcagagactcgaga
cctgcaccagagccaaagaaatacgaagagtcccccacccttaaattcagctcagccagt
aaatacgctgctctgctaatggacagagagcaaggagatgacgcagagaatggtgtggaa
taa
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