KEGG   Oncorhynchus mykiss (rainbow trout): 110494005
Entry
110494005         CDS       T07259                                 
Symbol
ubap2a
Name
(RefSeq) ubiquitin-associated protein 2 isoform X1
  KO
K26545  ubiquitin-associated protein 2
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:omy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:omy04121]
    110494005 (ubap2a)
   03400 DNA repair and recombination proteins [BR:omy03400]
    110494005 (ubap2a)
Ubiquitin system [BR:omy04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Multi subunit type E3 associated proteins
    110494005 (ubap2a)
DNA repair and recombination proteins [BR:omy03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     110494005 (ubap2a)
SSDB
Motif
Pfam: UBAP2-Lig UBA_RAD5A GIP1_N UBA_4
Other DBs
NCBI-GeneID: 110494005
NCBI-ProteinID: XP_036805893
UniProt: A0A8K9XPQ7
LinkDB
Position
17:48194992..48235191
AA seq 1216 aa
MMTSLGGDKARGTRDKALPAATHATQPQKQLQATAEQIRLAQMIYDKNDAEFEDKVNQLM
EVTGKIQDECMVALHDCNEDVNRAINFLLESTSDTTSWETVGKKKPLAKDGPTEGKENRE
KRGGEREGSRGRGGSNRRGRGASNRSRQVERVRPEENGVEAVPGPLDRVSERGRRGGRGG
RGECQLVALSHMFQSTLPVGSGGRGRGRAPAGSRFSAQGMGTFNPADYTPEQGTGTTQGD
TWESGASNSTDGTVAWRSTLEDWAAEDWSEEMSLSETKVFTASSAPAPQNHLTPGQSLDL
PSLLQKPVGEGRGGGGDAPSTQSLVFTNSHHHPPRNGSAIGTGSTSYAHAALSSVLGAGF
GDLGQSKRSQSSPGAQILEQLKGPGLGPLPSSQAAPPPSTQGASNTSLGSRLPGVGGAAP
VLPPPSTSSWDIKIPEPSATSSSHTSHFSRDFKLQPEPSLVLSQLAQKHGAPSLPIARQP
SPAQSPSPIQGPPLATIGAKPAHSAGPDTQGSNSLQQHRVPQLKAQKRRIPPTSKIPSSA
VEMPGTADVPGLNVQFGALDFGSEAALPDFGPVETCVTGGSRESTPAPQSQTNLYSNHLS
ESMSTPLSVTLPLSSSEPVYHSPSVPMPSLTTSSMGTVSSSTPSSSISSSVPSSSSTSPF
VSVGSGYDCGPVAPHSHLAFSQSKEAPGPIMNGLNGVRTSAMDPSSASSTPKPESPSLSI
STSSAPAPSALMPSSIPSHSSALPSLPHDMPSASLAPLSSHGSSSHSSLTYTSVDSSVSS
LAPSSGSYSSAQAPAQSLHQVNSGMAHIMGTMSHMNSMVSSMGGSGHHASQALGLSANGT
TAQANLSSAPRTAPLLSSSTGKAPPNLSQGVPPLLPNQYIMGPGGLLPAYPQIYGYEDLH
MLQSRLPMPSLQDYYGITFPGPAALSGRDGSLTNNPYSGEVTKFGRGDSTSPAPSSLSAQ
QQPQQGQSQGQNQAQPQPPQPQPQGQPQGHHNSQQQQAFLPPGYSYTGLPYYPGMPGAAF
QYGHTMFMPQGQGPAKQHGVGLGNPSASPFQQQQPSGYGQHTFSSGYEDLTQGQAGVDYS
KGYSNSSQSQAKSATTGPGKGGISVTSGNSGVPEISGSVYNKTQSFDKQGFHAGTPPPFN
LPSAMGGPGGAPGGYAPAPFLHILQPAHQQPHSQMLHHHLAQDGQGGPSQRGQSSSMQQK
SQVNKSSYGSSPYWGN
NT seq 3651 nt   +upstreamnt  +downstreamnt
atgatgacatcgttgggcggcgacaaagcccggggcactcgggacaaagcgctgcctgct
gccacacacgcaactcaaccacagaaacagctccaggcgactgcagaacagatccgactc
gcccagatgatctatgacaagaatgatgctgagtttgaggacaaagtgaaccagctgatg
gaggtgacaggaaagatccaggatgaatgcatggtagcgctccacgactgcaacgaggat
gtcaacagagccatcaacttcctccttgagagcacctctgatacgacctcatgggagaca
gttgggaagaagaaacccctagcgaaggacggcccgacggagggcaaggagaaccgggag
aagagaggaggagagcgagagggcagcaggggccgcggaggaagcaatcggagaggcagg
ggggccagcaaccgcagccgccaggttgagagagtgcggccagaggaaaatggtgtggag
gcggtccctggccctttggacagagtgtcagagcgaggtcgcagggggggaagagggggt
agaggtgagtgtcaattagtggcactttctcatatgttccagtcaacactcccagtcgga
tctggaggcagaggaaggggcagggcaccagcgggtagcaggttctcagcccagggaatg
gggacctttaacccagcagactacaccccagaacaggggacagggaccacacaaggtgac
acttgggagtcaggggccagcaacagcacagacgggacagtggcctggaggagtactctg
gaagactgggctgctgaggactggagcgaagagatgagtctctccgagaccaaagtgttc
accgcctcaagtgcacctgcacctcagaaccacctcacacctgggcaaagtctggacctg
ccctctctgctgcagaagccagtgggagaaggaagaggaggaggaggggatgccccctct
acacagagcctggttttcaccaactcccaccatcaccccccccgcaacgggtcggccatt
ggcacaggcagcaccagctatgcacacgccgccctgtcgtcagtgctaggggcaggtttc
ggggacctgggccagtctaagaggagtcagtccagtccgggggcccagatcttggagcag
ctgaagggcccgggcctgggtcctctcccatcctcccaggcagccccccctcccagcact
cagggggccagtaacacctctctggggagtagactcccaggggtaggaggagccgctcct
gttctcccaccgccttccacttcaagctgggatatcaagatcccagagcccagcgccaca
tcctcctcacacacctcccacttcagccgggactttaagctgcagcctgagccatccctg
gtgctgagccagctggcccagaaacacggcgccccctctctgcccattgctcgccagccc
agcccagcccaatctccctcccccatccagggaccccccctggccaccatcggtgccaag
cctgcccacagcgccgggccggacactcaaggcagcaactcgctgcagcagcaccgcgtt
ccacagctaaaggcccagaaacgaaggatacctcccacctctaagatcccctcgtcggcg
gtggaaatgcctggcactgccgacgtccccggtcttaacgttcagtttggagcactggac
tttggctcggaggcagccctgccggactttggccccgtggagacgtgtgtcaccgggggc
tccagggagtccaccccggccccacagagccagaccaacctctattccaatcacctcagt
gaatctatgagcacccctctttccgtcaccctccctctctcatcctctgagcctgtctac
cactccccgtcggtgcccatgcccagcctgaccacctcctctatgggtacagtcagctcc
tccactccatcctcctccatctcctcctcggtgccctcctcctcttccacgtctcccttt
gtctcagtggggagcggttatgactgtgggcctgtggcccctcactcacacctggccttc
tcccagagcaaagaggcacccgggccaatcatgaacggtctgaacggtgtgaggacgtct
gctatggacccttcatcagcctcctctacgccaaagccggagtctccctctctgagcatc
agtaccagcagtgcccctgccccctctgccctcatgccctcctccataccctcccacagc
tcggcactccccagtctgccacacgacatgccctctgccagcctggcaccactcagcagc
catggcagcagtagtcattcctctctcacttataccagtgtagacagtagtgtgagctct
ctggcaccctcgtctggctcctactcctctgcccaggccccagcccagtcactccaccag
gtcaacagcggcatggctcacatcatgggcaccatgagccacatgaacagcatggtcagt
agcatgggtggcagcgggcatcacgccagccaagcactggggctcagtgccaacgggacc
acggcccaagcgaacctctcctcggcccccaggaccgcaccgctgctctcctcctcaact
ggtaaagctcctcctaacctgtctcagggggttcccccactactgcccaaccagtacatc
atgggcccaggaggcctgctgcctgcctacccgcagatctacggctatgaggacctccac
atgctacagtccagactgcctatgccctctttgcaggattactacggaatcacattccct
ggtcctgcagcactctctggcagagatgggagcctcaccaataacccctactcaggtgaa
gtcacaaagtttggcaggggtgactccacctcccctgcgcctagcagcttgtcggcccaa
cagcagccccaacagggccagagccaagggcagaaccaggcccagccacaacccccccag
ccccagcctcaaggccaaccccagggccaccacaacagccagcagcagcaggccttcctc
ccgccaggctacagctacacaggcctgccctactaccccgggatgcctggcgctgccttc
cagtacggccacaccatgttcatgccccagggacaggggccagccaagcagcacggtgtg
ggtttgggaaacccctcagccagccccttccagcagcagcagcccagtggctacggccag
cacaccttcagctcagggtatgaggacctgacccagggccaagcaggagtagactatagc
aagggatatagcaactcctcccagagccaggccaaatctgctaccacaggccccggtaaa
ggcggcatctctgtgacgtcaggcaactccggggtcccagaaatcagtggaagtgtttac
aacaagacccagtcctttgataagcagggattccatgcggggactccccctcctttcaac
ctgccttcggctatggggggtcctggaggggccccgggtggctacgctcccgcccccttc
ctccacatcctgcagcctgcccaccagcaaccccactcccagatgctgcaccatcatctg
gcccaggacggacagggaggtcctagccagcgaggccagtctagcagcatgcagcagaag
agccaggtcaacaagtccagctacggcagctccccatactggggcaactga

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