Oncorhynchus mykiss (rainbow trout): 110494059
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Entry
110494059 CDS
T07259
Name
(RefSeq) neurofascin isoform X1
KO
K06757
neurofascin
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
110494059
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
omy04515
]
110494059
Cell adhesion molecules [BR:
omy04515
]
Immunoglobulin superfamily
L1 family
110494059
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
fn3
Bravo_FIGEY
V-set
Ig_DSCAM-DSCAML_C
Ig_5
Ig_4
C2-set_2
Ig_6
Ig_VEGFR-1-like_5th
BiPBP_C
Dicty_REP
Mucin
DUF3792
Motif
Other DBs
NCBI-GeneID:
110494059
NCBI-ProteinID:
XP_036805981
Ensembl:
ENSOMYG00000034892
LinkDB
All DBs
Position
17:51967039..52121978
Genome browser
AA seq
1464 aa
AA seq
DB search
MRDLYRITRKERAQTHTLSYTAYATAELTHIAERRRRNSDISTVTAQVRDVSGIATKEEK
QRGEMLAQGGPWALSVISLVLLLWQEVSAIDVPLDSKIQQDLKQPPTIMKQSLKDYIVDP
RDNIIIECEAKGNPVPTFSWRRNGKFFNVGKDPRVTMRKRSGTLEISFRSGGRPEDYEGE
YQCFASNDFGTALTNKILLRVSKSPLWPKEVLEPVVVGEGSPLVLACNPPPGLPPPLTFW
MDSAMMPITQDKRVSMGLNGDLYFSNVLAKDSHRDYSCNARFLFTHTIQQKNPFTLKVQT
KEPYNDTSSVNSTDPYGGRKVAETTPNFLSPTGTDSSRMVMRGEKLKLECIASGVPTPSI
KWFKKGGDLNQKVKLDNFNKTLRIDSVSEEDAGEYMCMANNQIGSIRHSIYVQVKAAPYW
LDQPSNLVLAPDENGRLVCRANGNPKPHIQWLVNGEPIESNSSLPNPSRTVAGDTIMFRS
VQIGSSAVYQCNASNDHGYLLANAFISILDMAPRMLGPKNQLIKVIENNRTFLDCPYFGS
PLPELRWFKNGQGSGLDGGHYRVYINGTLEIKRARAEDQGTYTCVASNILGKEENQVRLE
VKEPTRIVRAPEHQSAIRGTMARFDCRVKSDLTLPITVTWLKDDKPLSLGSRLKKDEDSL
SIPNVHEGDEGTYTCTVKTEIDQDTASARLTVLEDASLSPSQSSVLPTDRPDSPMDLELS
DPEERNVRLTWIPGDDHNSPVTLFVVQFEEDRWESGKWQNLSSYPGDFNSVILELSPFVN
YQFRVIAVNSVGQSRPSLPSQRYQTSGAPPDTIPRGLKGWGTKKNNMEISWEPLLDTERN
GPNLHYSVWWRRKDTGEEWSNVTTVGAKHIVHDTETYVPYEIKLQAVNDFGLGGESNIII
GYSGEDKPTAPPTDLRVSKIDSTKVNVHWTPVDPSTVLGEFKEYRVYYWREGSMVKGLRV
NKEKKTKGFYSTVAQPTGILTDLQPYSHYRIYMVVANNRYEGPPSNHVEFRTKEGVPEAP
KFFKIIQRSTDVIHLEWDKPLEPNGILIGYKLNYQTVNGSRVGLMQMQSFLPNVTTYTLR
LPERAIRYKFYLAALTQVGAGEVYAEESPHFTNEEDFFSSVEPTDVSVSTTFPPPPPTTT
AATTTISTSTTTPPTTTTTTTTTTTTTTTTTTAATTATTPVLVTSTKQAHTNVLVGMAPG
SVIWNLTVEPNSNYANVSWNHNFPAGSSEFQLEFTLDSNGSMSSVPVNQPPIKLAGLIEG
AKYHLRVYSNEYHSISSNVVTFETSAAYSKDQVDIATQGWFIGLMCAIALIILILLIVCF
IKRSRGGKYPVREKKDLPLDAVDQKGEDGSFDYQNENENENENSCSFKRYGRSRSLFCTV
HTTTRITLNSDEDNKPLQGSQNSLDGGVKESDDSLVDYGEGGDGQFNEDGSFIGQYTVKK
DKDETEGNESSEATSPVNAIYSLA
NT seq
4395 nt
NT seq
+upstream
nt +downstream
nt
atgagagacctgtaccgcattacacgaaaggagagagcacagacacacactctctcatac
acagcatacgctactgcagagctgacacacatcgcggagagaaggagaagaaacagcgat
atctctactgtcacggcacaggtcagagacgtatcaggaattgcgactaaagaggagaaa
cagaggggagagatgttggcgcagggcgggccttgggccctgtctgtcatatcactggtc
ctgctgctgtggcaagaagtgtctgctatcgatgttcctctcgattcaaagatccagcag
gacctgaagcagcctcccaccattatgaaacagtcgttgaaggactacattgttgatccc
agagataacatcatcattgagtgtgaggccaaggggaaccccgtgccaacgttctcatgg
cgacggaacgggaagttcttcaacgtgggcaaggatccgcgggtgacgatgcggaagcgc
tcaggaacgctggaaatcagcttccggagcggagggaggccagaggactacgagggggaa
taccagtgttttgcctccaacgactttggaacggcgctgaccaacaagatcctactacga
gtgtccaagtctcctctgtggcctaaggaggtgttggagccagtggtagtgggtgaggga
tctcccctggtcctggcctgtaaccctcctcctggtctgccccctccgctcaccttctgg
atggacagcgccatgatgcctataacccaggacaagcgtgtgtccatgggtctgaatgga
gacctgtatttctctaatgtgctggctaaagactcccacagagactacagctgcaacgcc
cgattcctcttcacacacactatccagcagaagaaccccttcacactcaaagtgcagacc
aaggagccgtataatgacacttcctctgtcaactccactgacccgtacggtggtcgtaag
gtagcagagaccacccctaacttcctctcccccacggggactgacagctcgaggatggtg
atgagaggagaaaagctaaagctggaatgtatcgcttccggagttccaactcccagtata
aagtggtttaagaaggggggagacctgaaccagaaggtgaaactagacaacttcaataag
actctgcgtatcgacagtgtgtcagaggaggatgcaggggagtacatgtgtatggccaac
aatcagataggaagcatccgacactccatctacgtccaggttaaagcggctccctattgg
ctggaccagccgtccaatctggtgctagcgccggatgagaacggtcgtctggtgtgtcgg
gccaatggaaaccccaaacctcacatccagtggctggtcaacggagagccgatcgagagc
aatagctccttgcccaaccctagcagaacggtggcaggtgacaccatcatgttccgctcc
gttcagatcggcagcagcgctgtgtaccagtgtaatgcatccaatgaccatggttacttg
ctggccaacgcattcattagcatactggacatggcccccagaatgctgggtcctaagaac
cagctgataaaggtgatagagaacaacagaaccttcctggactgtccctattttggctcg
ccacttcctgagctacgctggtttaagaatggtcaaggaagtggtctggacggtggtcac
tatcgggtctacatcaacgggaccctagagatcaagcgtgcacgggctgaggaccagggg
acctacacctgcgtggccagcaacatcctgggcaaggaggagaaccaggtccgcctggag
gtcaaagagccgacacgtattgtcagggctccagagcaccagtcagccatcagaggcacc
atggctcgtttcgactgccgggtcaaatcagacctcaccctgcccatcactgttacctgg
ctgaaggatgacaagcctctctccctgggatcgaggttgaagaaggatgaggattctctg
tccatccccaatgtccatgagggagatgagggaacatacacctgcactgttaaaacagag
attgaccaagacactgcctcggcacgccttactgtgttagaggacgcctccctgtctccc
tcacagtctagtgtcttgcctacagaccgtcctgactctcccatggacctggagctgtct
gaccctgaagaacgcaacgtacgactcacctggatacctggagatgatcacaacagcccc
gtcacattgttcgtggttcagtttgaggaggaccgttgggagtcaggcaagtggcagaac
ctgtctagttatcccggagacttcaactctgtcatcctggagctctctccttttgtcaac
taccagttcagagtcatcgctgtcaattctgtgggccagagccgccccagcctcccctcg
caacgataccagaccagcggagcccctccagatactatccctagaggcctgaaaggctgg
ggcaccaagaagaacaacatggagatcagctgggagcccttgttggacacagagcgaaac
ggacctaacctgcactactcggtgtggtggcgacggaaggatacgggggaggaatggagt
aatgtgactacagtgggtgcaaagcacattgtccacgacacagagacctacgtaccctat
gagatcaaactgcaggctgtgaatgactttggactgggaggcgagtccaacatcatcata
ggatactctggggaggacaagcccacagcccctcccactgacctgcgagtgtctaagatt
gacagcaccaaggtcaatgtccactggaccccagtagatcccagcactgtattgggagag
ttcaaggagtacagggtgtactactggcgtgagggcagcatggtgaagggtctgcgtgtg
aataaagagaagaagactaaagggttctacagtaccgtggcccagcctactggcatactg
acagacctacagccatacagccactaccgcatatacatggtggtcgccaacaatcgctac
gagggaccgcctagcaaccatgtggagttccgtaccaaggaaggagtgccagaagctcct
aagttctttaagatcatccagcggagtacagatgttatccacctggagtgggacaaaccc
ctggagcctaacggcattctgattggatataaactcaactaccagacagtgaacgggtcg
cgtgtaggccttatgcagatgcagagtttcctacctaacgtgacaacgtatacactccgc
ctgcccgaacgagccatccgctataagttctacctggcggccctcacacaggtgggagca
ggggaggtctatgctgaggagtctccacacttcaccaatgaggaagactttttcagctca
gtcgagcctacagatgtgtccgtgtctacaactttccctccacctcctcccactactacc
gctgctactacaaccattagtacctcaactactactccccctaccactactaccactact
accactactactactactactactactaccactactgctgcgactactgctaccactcct
gtgctggttaccagcaccaagcaagcacatacgaatgtgttggtaggcatggctcctggg
agtgtgatctggaacctgacggtggagcctaacagtaactacgctaacgtcagctggaac
cacaacttcccggccggcagcagcgagttccagctagagttcacactggacagcaacggc
agtatgtcaagcgtacctgtgaaccagccgcccattaaactggcgggactgatcgaaggg
gccaagtaccacctgagggtgtactccaacgaataccacagcatctccagcaatgttgtc
acctttgagaccagtgcagcctacagtaaagaccaggtggacattgctacccagggctgg
ttcatcgggctgatgtgtgcaattgctctcatcatcctcatcctcctcatcgtctgcttc
atcaagaggagtcgcggaggcaaatacccagtgcgagagaaaaaagatctccctctggat
gcagtggatcagaaaggagaggacggatcatttgactaccagaacgaaaatgagaacgaa
aacgagaacagttgttccttcaaaaggtatggaaggagtagaagcctgttctgcacagtg
cacaccacaaccagaataaccctgaacagcgacgaggacaacaagcctctgcagggcagc
cagaactctctggacggcggggtgaaggagagtgacgacagcctggtagactacggcgag
ggaggggatggccagttcaacgaggacggctccttcattggccagtacacagtcaagaag
gacaaggacgaaacagagggcaatgaaagctcagaggccacctcacccgttaacgccatc
tactcgctggcataa
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integrated database retrieval system