KEGG   Oncorhynchus mykiss (rainbow trout): 110494059
Entry
110494059         CDS       T07259                                 
Name
(RefSeq) neurofascin isoform X1
  KO
K06757  neurofascin
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Pathway
omy04514  Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:omy00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    110494059
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:omy04515]
    110494059
Cell adhesion molecules [BR:omy04515]
 Immunoglobulin superfamily
  L1 family
   110494059
SSDB
Motif
Pfam: I-set Ig_3 ig Ig_2 fn3 Bravo_FIGEY V-set Ig_DSCAM-DSCAML_C Ig_5 Ig_4 C2-set_2 Ig_6 Ig_VEGFR-1-like_5th BiPBP_C Dicty_REP Mucin DUF3792
Other DBs
NCBI-GeneID: 110494059
NCBI-ProteinID: XP_036805981
Ensembl: ENSOMYG00000034892
LinkDB
Position
17:51967039..52121978
AA seq 1464 aa
MRDLYRITRKERAQTHTLSYTAYATAELTHIAERRRRNSDISTVTAQVRDVSGIATKEEK
QRGEMLAQGGPWALSVISLVLLLWQEVSAIDVPLDSKIQQDLKQPPTIMKQSLKDYIVDP
RDNIIIECEAKGNPVPTFSWRRNGKFFNVGKDPRVTMRKRSGTLEISFRSGGRPEDYEGE
YQCFASNDFGTALTNKILLRVSKSPLWPKEVLEPVVVGEGSPLVLACNPPPGLPPPLTFW
MDSAMMPITQDKRVSMGLNGDLYFSNVLAKDSHRDYSCNARFLFTHTIQQKNPFTLKVQT
KEPYNDTSSVNSTDPYGGRKVAETTPNFLSPTGTDSSRMVMRGEKLKLECIASGVPTPSI
KWFKKGGDLNQKVKLDNFNKTLRIDSVSEEDAGEYMCMANNQIGSIRHSIYVQVKAAPYW
LDQPSNLVLAPDENGRLVCRANGNPKPHIQWLVNGEPIESNSSLPNPSRTVAGDTIMFRS
VQIGSSAVYQCNASNDHGYLLANAFISILDMAPRMLGPKNQLIKVIENNRTFLDCPYFGS
PLPELRWFKNGQGSGLDGGHYRVYINGTLEIKRARAEDQGTYTCVASNILGKEENQVRLE
VKEPTRIVRAPEHQSAIRGTMARFDCRVKSDLTLPITVTWLKDDKPLSLGSRLKKDEDSL
SIPNVHEGDEGTYTCTVKTEIDQDTASARLTVLEDASLSPSQSSVLPTDRPDSPMDLELS
DPEERNVRLTWIPGDDHNSPVTLFVVQFEEDRWESGKWQNLSSYPGDFNSVILELSPFVN
YQFRVIAVNSVGQSRPSLPSQRYQTSGAPPDTIPRGLKGWGTKKNNMEISWEPLLDTERN
GPNLHYSVWWRRKDTGEEWSNVTTVGAKHIVHDTETYVPYEIKLQAVNDFGLGGESNIII
GYSGEDKPTAPPTDLRVSKIDSTKVNVHWTPVDPSTVLGEFKEYRVYYWREGSMVKGLRV
NKEKKTKGFYSTVAQPTGILTDLQPYSHYRIYMVVANNRYEGPPSNHVEFRTKEGVPEAP
KFFKIIQRSTDVIHLEWDKPLEPNGILIGYKLNYQTVNGSRVGLMQMQSFLPNVTTYTLR
LPERAIRYKFYLAALTQVGAGEVYAEESPHFTNEEDFFSSVEPTDVSVSTTFPPPPPTTT
AATTTISTSTTTPPTTTTTTTTTTTTTTTTTTAATTATTPVLVTSTKQAHTNVLVGMAPG
SVIWNLTVEPNSNYANVSWNHNFPAGSSEFQLEFTLDSNGSMSSVPVNQPPIKLAGLIEG
AKYHLRVYSNEYHSISSNVVTFETSAAYSKDQVDIATQGWFIGLMCAIALIILILLIVCF
IKRSRGGKYPVREKKDLPLDAVDQKGEDGSFDYQNENENENENSCSFKRYGRSRSLFCTV
HTTTRITLNSDEDNKPLQGSQNSLDGGVKESDDSLVDYGEGGDGQFNEDGSFIGQYTVKK
DKDETEGNESSEATSPVNAIYSLA
NT seq 4395 nt   +upstreamnt  +downstreamnt
atgagagacctgtaccgcattacacgaaaggagagagcacagacacacactctctcatac
acagcatacgctactgcagagctgacacacatcgcggagagaaggagaagaaacagcgat
atctctactgtcacggcacaggtcagagacgtatcaggaattgcgactaaagaggagaaa
cagaggggagagatgttggcgcagggcgggccttgggccctgtctgtcatatcactggtc
ctgctgctgtggcaagaagtgtctgctatcgatgttcctctcgattcaaagatccagcag
gacctgaagcagcctcccaccattatgaaacagtcgttgaaggactacattgttgatccc
agagataacatcatcattgagtgtgaggccaaggggaaccccgtgccaacgttctcatgg
cgacggaacgggaagttcttcaacgtgggcaaggatccgcgggtgacgatgcggaagcgc
tcaggaacgctggaaatcagcttccggagcggagggaggccagaggactacgagggggaa
taccagtgttttgcctccaacgactttggaacggcgctgaccaacaagatcctactacga
gtgtccaagtctcctctgtggcctaaggaggtgttggagccagtggtagtgggtgaggga
tctcccctggtcctggcctgtaaccctcctcctggtctgccccctccgctcaccttctgg
atggacagcgccatgatgcctataacccaggacaagcgtgtgtccatgggtctgaatgga
gacctgtatttctctaatgtgctggctaaagactcccacagagactacagctgcaacgcc
cgattcctcttcacacacactatccagcagaagaaccccttcacactcaaagtgcagacc
aaggagccgtataatgacacttcctctgtcaactccactgacccgtacggtggtcgtaag
gtagcagagaccacccctaacttcctctcccccacggggactgacagctcgaggatggtg
atgagaggagaaaagctaaagctggaatgtatcgcttccggagttccaactcccagtata
aagtggtttaagaaggggggagacctgaaccagaaggtgaaactagacaacttcaataag
actctgcgtatcgacagtgtgtcagaggaggatgcaggggagtacatgtgtatggccaac
aatcagataggaagcatccgacactccatctacgtccaggttaaagcggctccctattgg
ctggaccagccgtccaatctggtgctagcgccggatgagaacggtcgtctggtgtgtcgg
gccaatggaaaccccaaacctcacatccagtggctggtcaacggagagccgatcgagagc
aatagctccttgcccaaccctagcagaacggtggcaggtgacaccatcatgttccgctcc
gttcagatcggcagcagcgctgtgtaccagtgtaatgcatccaatgaccatggttacttg
ctggccaacgcattcattagcatactggacatggcccccagaatgctgggtcctaagaac
cagctgataaaggtgatagagaacaacagaaccttcctggactgtccctattttggctcg
ccacttcctgagctacgctggtttaagaatggtcaaggaagtggtctggacggtggtcac
tatcgggtctacatcaacgggaccctagagatcaagcgtgcacgggctgaggaccagggg
acctacacctgcgtggccagcaacatcctgggcaaggaggagaaccaggtccgcctggag
gtcaaagagccgacacgtattgtcagggctccagagcaccagtcagccatcagaggcacc
atggctcgtttcgactgccgggtcaaatcagacctcaccctgcccatcactgttacctgg
ctgaaggatgacaagcctctctccctgggatcgaggttgaagaaggatgaggattctctg
tccatccccaatgtccatgagggagatgagggaacatacacctgcactgttaaaacagag
attgaccaagacactgcctcggcacgccttactgtgttagaggacgcctccctgtctccc
tcacagtctagtgtcttgcctacagaccgtcctgactctcccatggacctggagctgtct
gaccctgaagaacgcaacgtacgactcacctggatacctggagatgatcacaacagcccc
gtcacattgttcgtggttcagtttgaggaggaccgttgggagtcaggcaagtggcagaac
ctgtctagttatcccggagacttcaactctgtcatcctggagctctctccttttgtcaac
taccagttcagagtcatcgctgtcaattctgtgggccagagccgccccagcctcccctcg
caacgataccagaccagcggagcccctccagatactatccctagaggcctgaaaggctgg
ggcaccaagaagaacaacatggagatcagctgggagcccttgttggacacagagcgaaac
ggacctaacctgcactactcggtgtggtggcgacggaaggatacgggggaggaatggagt
aatgtgactacagtgggtgcaaagcacattgtccacgacacagagacctacgtaccctat
gagatcaaactgcaggctgtgaatgactttggactgggaggcgagtccaacatcatcata
ggatactctggggaggacaagcccacagcccctcccactgacctgcgagtgtctaagatt
gacagcaccaaggtcaatgtccactggaccccagtagatcccagcactgtattgggagag
ttcaaggagtacagggtgtactactggcgtgagggcagcatggtgaagggtctgcgtgtg
aataaagagaagaagactaaagggttctacagtaccgtggcccagcctactggcatactg
acagacctacagccatacagccactaccgcatatacatggtggtcgccaacaatcgctac
gagggaccgcctagcaaccatgtggagttccgtaccaaggaaggagtgccagaagctcct
aagttctttaagatcatccagcggagtacagatgttatccacctggagtgggacaaaccc
ctggagcctaacggcattctgattggatataaactcaactaccagacagtgaacgggtcg
cgtgtaggccttatgcagatgcagagtttcctacctaacgtgacaacgtatacactccgc
ctgcccgaacgagccatccgctataagttctacctggcggccctcacacaggtgggagca
ggggaggtctatgctgaggagtctccacacttcaccaatgaggaagactttttcagctca
gtcgagcctacagatgtgtccgtgtctacaactttccctccacctcctcccactactacc
gctgctactacaaccattagtacctcaactactactccccctaccactactaccactact
accactactactactactactactactaccactactgctgcgactactgctaccactcct
gtgctggttaccagcaccaagcaagcacatacgaatgtgttggtaggcatggctcctggg
agtgtgatctggaacctgacggtggagcctaacagtaactacgctaacgtcagctggaac
cacaacttcccggccggcagcagcgagttccagctagagttcacactggacagcaacggc
agtatgtcaagcgtacctgtgaaccagccgcccattaaactggcgggactgatcgaaggg
gccaagtaccacctgagggtgtactccaacgaataccacagcatctccagcaatgttgtc
acctttgagaccagtgcagcctacagtaaagaccaggtggacattgctacccagggctgg
ttcatcgggctgatgtgtgcaattgctctcatcatcctcatcctcctcatcgtctgcttc
atcaagaggagtcgcggaggcaaatacccagtgcgagagaaaaaagatctccctctggat
gcagtggatcagaaaggagaggacggatcatttgactaccagaacgaaaatgagaacgaa
aacgagaacagttgttccttcaaaaggtatggaaggagtagaagcctgttctgcacagtg
cacaccacaaccagaataaccctgaacagcgacgaggacaacaagcctctgcagggcagc
cagaactctctggacggcggggtgaaggagagtgacgacagcctggtagactacggcgag
ggaggggatggccagttcaacgaggacggctccttcattggccagtacacagtcaagaag
gacaaggacgaaacagagggcaatgaaagctcagaggccacctcacccgttaacgccatc
tactcgctggcataa

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