KEGG   Oncorhynchus mykiss (rainbow trout): 110494074
Entry
110494074         CDS       T07259                                 
Name
(RefSeq) U3 small nucleolar RNA-interacting protein 2
  KO
K14793  ribosomal RNA-processing protein 9
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:omy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:omy03009]
    110494074
Ribosome biogenesis [BR:omy03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    110494074
SSDB
Motif
Pfam: WD40 Beta-prop_WDR3_1st Beta-prop_WDR5 Beta-prop_IFT122_1st Beta-prop_THOC3 Beta-prop_TEP1_2nd WD40_Prp19 Beta-prop_WDR3_2nd WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz EIF3I WDR55 WD40_Gbeta Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_2nd Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_WDR36-Utp21_1st NBCH_WD40 Beta-prop_TEP1_C CFAP251_N Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd DSE1_N Beta-prop_WDR41 WD40_MABP1-WDR62_1st ASA1 ANAPC4_WD40 WDR90_beta-prop_4th Beta-prop_SCAP Beta-prop_VPS8 Beta-prop_SPT8 Beta-prop_NOL10_N Beta-prop_Aladin Beta-prop_IP5PC_F Beta-prop_Vps41 Beta-prop_IFT140_1st Beta-prop_DCAF4 PAC11 Beta-prop_HPS5 PEP5_VPS11_N WD_LRWD1 Beta-prop_DCAF12 Beta-prop_WDR75_2nd WDR54 Beta-prop_NWD2_C Beta-prop_WDR19_1st WD40_like LAIKA
Other DBs
NCBI-GeneID: 110494074
NCBI-ProteinID: XP_021424445
Ensembl: ENSOMYG00000040259
LinkDB
Position
17:complement(52708968..52715179)
AA seq 478 aa
MSSFFIKKKGPPKVFKKNENSAGSKRKNDTDTGNKLKKKRNSKHNEEISSDSETEGLSLH
RKRRANFDEEFDETPQEKKLRLAKLYLDQLRDEEEKKAEEESFEMDLIAGRLQEEVLEQK
GQLQRMVAKDLLPPDVSEIRLLRGHKLPVTCLAISPDDQHVFSASKDCSIIKWDVESGKR
LHTIAGGRKGTEDRHVGHTAHVLCMSISSDGKYLATGDMNKLIMIWEAATCKHLYKFTGH
RGPVSGLSFRRGTHDLYSASHDRSIKVWNVDENAYVETLFGHQDVITGLDSGSRERCVTA
GGRDRTVRVWKIAEESQLVFHGHEGSIDCIQLINEEHMITGANDGSVSLWSVNKKKPLSM
VKAAHGLHGDSGLEQPYWVAAVAALQNSDTVASGSHNSKVQLWKCGQGFRHLEPLFSVPV
IGFVNSLKFSSSGKFLVAGVGQEHRLGRWWRLKEAKNGLYIIPLKRRQEEVNGEKNGE
NT seq 1437 nt   +upstreamnt  +downstreamnt
atgtcgtctttctttataaagaaaaaaggaccgccaaaggttttcaaaaagaacgagaat
tcagcaggttcaaaacgaaagaatgatacagacacaggaaacaaactcaagaaaaaacga
aattcaaagcacaatgaagaaatctccagcgactctgaaacagaaggcctttcactgcac
agaaaacggagggccaatttcgacgaagagtttgatgagaccccacaggagaaaaaacta
cgattagctaaactttacctcgaccaattgagggatgaggaagaaaagaaggcagaggag
gagtcctttgagatggacctgattgctggaagacttcaagaagaagtgcttgagcagaaa
ggacagctccaacggatggttgcaaaagatctcctgccaccagatgtgtcagagattcgt
ctgttgaggggccacaagctgccagtcacctgtctggccatttctcccgatgaccaacac
gtattttccgcttccaaagactgctccatcatcaaatgggatgttgagagtggtaagaga
cttcatacgatagctggtgggaggaaaggaacagaggatcgccatgtgggacatacggcc
catgtcctatgtatgtctatatcatcggatggcaaatacctggctactggagacatgaat
aagttgatcatgatctgggaggcagcaacatgtaaacacctgtacaagtttacaggacat
agaggcccagtatcgggcctatccttcaggaggggcacccatgacttgtacagtgcttct
catgaccgctccatcaaggtgtggaacgtggatgaaaacgcctatgtggaaacactgttt
ggacaccaggatgtgatcacagggctggacagtgggagtagggagcgctgtgtgactgca
ggggggagggaccgcactgtgagggtgtggaagatcgctgaggagtcccagctagtgttc
catggccatgagggctccatcgactgtatccagctcattaacgaggaacacatgataaca
ggcgctaatgatggctctgtctccctgtggagtgtgaacaagaagaagcctcttagcatg
gtgaaggcagcccacggtctgcatggcgactcgggactggagcagccctactgggtagcg
gccgtggcagctctgcagaactctgacaccgtagcctcaggttcccacaactctaaggtg
cagctgtggaaatgtggtcaagggttccgtcatctggagcctctcttcagcgtccctgtg
attggttttgtcaacagtctaaagttctccagttctgggaagttcctggtggcaggagta
ggacaggagcacaggcttggtcgatggtggagactgaaagaagcgaagaacggactctac
attattcctctgaaacgacgacaagaagaggtgaatggagaaaagaatggggagtag

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