Oncorhynchus mykiss (rainbow trout): 110494100
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Entry
110494100 CDS
T07259
Name
(RefSeq) serine/arginine-rich splicing factor 3
KO
K12892
serine/arginine-rich splicing factor 3
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03040
Spliceosome
omy05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110494100
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
110494100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
omy03041
]
110494100
Spliceosome [BR:
omy03041
]
Common components
Common spliceosomal components
SR proteins
110494100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
110494100
NCBI-ProteinID:
XP_021424496
Ensembl:
ENSOMYG00000046242
LinkDB
All DBs
Position
17:54256327..54264613
Genome browser
AA seq
172 aa
AA seq
DB search
MGEPAHLRDCPLDCKVYVGNLGNSGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDP
RDATDAVRELDGRTLSGCRVRVELSNGEKRSRSRGPPPSWSRRPGRDDYSSRRRGSPPVR
RRSPRRRSFSRSRSRSPSRDRRRDRSISRDRNHKPSRSFSRSRSRSRTTERK
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
atgggagaacctgctcatctcagagattgtcctcttgattgtaaggtatatgttgggaac
ttgggcaacagtggaaacaagactgagttggagagggcgtttgggtattatggccccctg
cgtagtgtgtgggtggcgaggaaccccccaggctttgcctttgtcgagtttgaggacccc
agagatgcaactgatgctgtgagagaattggatgggaggactctgtctggctgcagagtg
agagttgagttgtccaatggtgagaaacgctcgaggagccgcggacctccaccctcctgg
agccgtcgccctggacgtgatgactacagcagcaggcgccgtgggagcccgcctgtcaga
cgccgctctcctaggaggaggagcttcagccgcagtcgcagcaggtctccgtcacgagac
agaagaagagataggtctatctccagagacaggaaccataaaccttcaagatccttctca
aggtcccggagccgctctaggaccacggagagaaagtga
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integrated database retrieval system
