Oncorhynchus mykiss (rainbow trout): 110494186
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Entry
110494186 CDS
T07259
Symbol
nelfcd
Name
(RefSeq) negative elongation factor C/D isoform X1
KO
K15181
negative elongation factor C/D
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
110494186 (nelfcd)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
omy03021
]
110494186 (nelfcd)
Transcription machinery [BR:
omy03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
NELF complex
110494186 (nelfcd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TH1
DUF4817
Motif
Other DBs
NCBI-GeneID:
110494186
NCBI-ProteinID:
XP_021424682
Ensembl:
ENSOMYG00000017042
LinkDB
All DBs
Position
17:57105818..57111562
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AA seq
579 aa
AA seq
DB search
MDEEYYERNIGDWDGPDGNQDDYVEGENDGKVQEDCLQKFSSRDYIMEPAVFNTLKTYFQ
AGGSPEHVIQLLSENYSAVAQTVNLLAEWLIQMGVEPAQVQERVENHLKSLLIKHFDPQK
ADSIFTVEGETPAWLEQMIAHTTWRDLFYKLAEAHPDCLMLNFTVKLISDAGYQGEITSV
STACQQLEVFSRVLRTSLATLLDGGEDNLEKNLPEFAKMVCHGEHTYLFAQAMMSIMSQE
EQGGSAMRRIGQEVQKSAHQRGHDASQITLALGTAAAYPRACQALGAMLSKGALNPADIT
VLFKMFSSMDPPPVELIRVPAFLDLFMQSLFKPGSKINQDHKHKYIHILAYAASVVETWK
KNKRVNINKDELKSTSKAIETVHNLCCNENKGATELVAELSTLYQCIRFPVVAMGVLKWV
DWTVSEPRYFQLQTDHTPVHLALLDEISTCHQLLHPQVLHLLIKLFETEHSQLDVMEQME
LKKTLLDRMVHLLSRGYVLPVVGYIRKCLEKLNTDISLIRYFVTEVLDVIAPPYTSDFVQ
LFLPILENDSIAGTIRTEGEHDPVAEFIAHCKSNFIMMN
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atggacgaggaatattacgaaaggaatattggagactgggatggtccggatggcaatcag
gacgactatgttgaaggggagaacgatgggaaagttcaggaggactgcctacagaagttc
tccagcagagattacatcatggagcctgctgtcttcaacaccctcaaaacatatttccag
gctggtggctcccctgaacatgtcatccagctcctgtcggagaactactctgccgtggca
cagactgtcaacctgctggcagagtggctcatccagatgggtgtagagcctgctcaggtg
caggagcgggtagagaatcacttgaaaagtctcttgatcaagcactttgacccccagaag
gcagactccatttttactgtagagggagagactcctgcctggctggaacagatgatcgcc
cacaccacctggagagaccttttctacaagctggccgaggcccaccctgactgtctgatg
ctcaacttcactgtcaaactcatctcagatgcgggctaccagggggagatcaccagtgtg
tcaacagcgtgccagcagctggaggtgttctccagggtcctaaggacctctctagccacg
ctgctggatggaggagaggacaacctagagaagaacctgccagaatttgctaagatggtg
tgtcacggggagcacacatacctgtttgcccaggccatgatgtccatcatgtctcaggag
gagcagggtgggtcggccatgcgcaggatcggccaggaagtacagaagtctgcacatcaa
cggggccatgatgccagtcagattactctggcattgggcacagcagcagcctaccctcga
gcctgccaggccctgggcgcaatgctgtccaaaggggcactcaaccctgccgacatcact
gtgctcttcaagatgttcagcagcatggacccacctcccgtagagctgatccgagtgcct
gcgttcctcgacctgttcatgcagtcgctgttcaagccgggctcaaagatcaaccaggac
cataaacacaaatacattcacatcctggcctatgctgccagtgtggttgaaacatggaaa
aagaacaagcgagtgaacatcaacaaggacgagcttaaatccacctccaaggccattgag
acggtccataacctgtgttgcaatgagaataaaggagccacagaactggtggctgagctc
agcaccctgtaccagtgcatccggttcccagttgttgccatgggggtactgaagtgggtt
gattggacggtctctgagccccgctacttccagctccagacagaccacacccctgtccac
ctggcacttctggacgagatcagcacctgtcaccagcttctgcacccacaggtcctccat
ctactgatcaagctctttgagaccgaacactcccagctcgacgtcatggagcagatggaa
ctgaagaagaccctgttggaccgtatggtccacctgttgagtcgaggctacgtgctgcct
gtggtcggatacatccgcaagtgcctggagaagctcaacacagacatctctctcatccgc
tactttgtaacggaggtgttggatgtgattgcccctccgtacacttcagactttgtccag
ctgttcctgcccatcctggagaacgacagcatcgctggcacaatacgcacagagggagaa
cacgatcctgtggctgagtttatagctcactgcaaatccaacttcatcatgatgaactga
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