KEGG   Oncorhynchus mykiss (rainbow trout): 110494203
Entry
110494203         CDS       T07259                                 
Name
(RefSeq) tubulin alpha chain
  KO
K07374  tubulin alpha
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Pathway
omy04145  Phagosome
omy04210  Apoptosis
omy04530  Tight junction
omy04540  Gap junction
omy04814  Motor proteins
omy05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:omy00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    110494203
  09143 Cell growth and death
   04210 Apoptosis
    110494203
  09144 Cellular community - eukaryotes
   04530 Tight junction
    110494203
   04540 Gap junction
    110494203
  09142 Cell motility
   04814 Motor proteins
    110494203
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    110494203
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:omy03019]
    110494203
   03036 Chromosome and associated proteins [BR:omy03036]
    110494203
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:omy04812]
    110494203
   04147 Exosome [BR:omy04147]
    110494203
Messenger RNA biogenesis [BR:omy03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     110494203
Chromosome and associated proteins [BR:omy03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     110494203
Cytoskeleton proteins [BR:omy04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    110494203
Exosome [BR:omy04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   110494203
  Exosomal proteins of other body fluids (saliva and urine)
   110494203
  Exosomal proteins of colorectal cancer cells
   110494203
SSDB
Motif
Pfam: Tubulin Tubulin_C Tubulin_3 DUF7281
Other DBs
NCBI-GeneID: 110494203
NCBI-ProteinID: XP_021424713
LinkDB
Position
17:57683845..57688188
AA seq 451 aa
MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDMVLD
RTRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA
VVEPYNAILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPSYTNLNRLIGQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAERAYHEQLSVSEITNACFEPCN
QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDMAALEKDYEEVGVDSIEGEGEEEGEEY
NT seq 1356 nt   +upstreamnt  +downstreamnt
atgcgtgaatgtatctcagtacacgtgggtcaggctggagtccagatgggcaatgcatgc
tgggaactctactgtctggagcacgggatccagcctgatggtcagatgcccagtgacaag
accattggaggaggagacgactccttcaacaccttcttcagtgagactggagctggcaag
cacgtccccagggctgtgtttgtggatctggagcccactgtcattgatgaggtgcgcaca
ggaacttaccgccaactcttccatcctgagcagctgatcactgggaaggaggatgcagcc
aacaactacgcccgtggtcattacaccatcggcaaagagatcatagacatggttctggac
aggactcgcaagctggctgaccagtgcactggcctccagggcttcctggtcttccacagc
tttggaggtggcaccggttccggtttcacctccctgttaatggaacgcctgtctgttgac
tatggcaagaagtccaagcttgagttctccatatacccagctccccaggtatccacagct
gttgttgagccctacaacgccatcctgaccacccacaccaccctggaacattcagactgt
gctttcatggtagacaatgaggcaatctatgacatctgccgtaggaaccttgatattgag
cgtccgtcctacactaatcttaacaggttgattggccagattgtgtcctccatcactgct
tccctccgattcgatggtgccctcaatgtggatctgacagagttccagactaacttggtg
ccctatccccgtatccacttccccctggccacctatgccccagtgatctcagcagagagg
gcttaccatgagcaactctctgtgtctgagatcaccaatgcttgctttgagccatgtaat
cagatggtaaaatgtgacccacgtcacggcaagtacatggcctgctgtctgctgtaccgt
ggcgacgttgttcccaaagatgttaacgctgccattgccaccatcaaaacaaaacgctcc
atccagtttgtagactggtgcccaactggtttcaaggttggtatcaactaccagccccca
actgtggtacctggtggagatctggccaaggtccagagggcagtgtgcatgcttagcaac
accactgctattgcagaggcctgggcccgccttgaccacaagtttgacctgatgtatgcc
aagcgtgctttcgtgcattggtacgtaggtgagggtatggaggagggagagttctctgag
gccagggaagacatggctgccctggagaaagattatgaggaagtgggtgtcgactccatt
gagggagagggagaggaggagggagaggagtattaa

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