Oncorhynchus mykiss (rainbow trout): 110494224
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Entry
110494224 CDS
T07259
Symbol
hnrnpa1a
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein A1a isoform X2
KO
K12741
heterogeneous nuclear ribonucleoprotein A1/A3
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110494224 (hnrnpa1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omy03019
]
110494224 (hnrnpa1a)
03041 Spliceosome [BR:
omy03041
]
110494224 (hnrnpa1a)
Messenger RNA biogenesis [BR:
omy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
110494224 (hnrnpa1a)
mRNA cycle factors
Common to processing body (P body) and stress granule
110494224 (hnrnpa1a)
Spliceosome [BR:
omy03041
]
Common components
Common spliceosomal components
hnRNP proteins
110494224 (hnrnpa1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Nup35_RRM_2
RBD_AKAP-17A
RRM_3
Motif
Other DBs
NCBI-GeneID:
110494224
NCBI-ProteinID:
XP_021424799
Ensembl:
ENSOMYG00000034783
UniProt:
A0A8C7T8M1
LinkDB
All DBs
Position
17:complement(58260252..58267363)
Genome browser
AA seq
370 aa
AA seq
DB search
MSKESPREPEQLRKLFIGGLSFETTDESLRTHFERWGSLTDCVVMKDPVTKRSRGFGFVT
YSSVDEVDASMEARPHKVDGRQVEPKRAVSREDSSRPGAHTTVKKIFVGGIKEDTEEHHL
RDYFDQFGKIEVIDIMTDRTSGKKRGFAFVTFDDHDAVDRIVIQKYHTVNGHNCEVRKAL
SKEDMNRSGPRGGNFGRGGGYGGGFGGGRGGGGGGYGDNDGYNNYGGNGGGYGGGPGGYG
GGNRGYGGGGGGGYGNQGGSYGGGGYDNYNNGGGGGGGGSYRGGNYGASSGGGSSSGSGG
GGGDYNDFGNYNSQSSSSYGPMKGGSGYSGGSGGGRSSGPYGGGGGGVGGGGYGGGSGGG
YGGGSGGRRF
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaagagtctccccgtgagccggagcagctccgcaagctcttcattggtgggctg
agcttcgagaccaccgacgagagtttacggacccattttgaaagatggggatccctcaca
gattgtgtggtaatgaaagatccagtcacaaagagatcgaggggctttggctttgtcact
tacagctctgtggatgaagttgatgcatcaatggaggctcgtcctcataaggttgatggc
cgccaagtggagcccaagagagcggtgtccagagaggattcctcaaggccaggtgctcac
accactgtgaagaagatctttgtgggtggcatcaaggaggacacagaggagcatcacctt
agggactactttgatcaatttggcaagatcgaagttatcgacatcatgactgataggacc
agcgggaagaagagggggtttgcctttgttacatttgatgatcatgatgcagtcgatagg
attgtcatccagaagtatcatacagtgaatggtcacaactgtgaagtgaggaaggctttg
tcaaaggaagacatgaaccggtccgggccaagaggtggaaactttggtagaggtggcgga
tatggaggtggtttcggtggagggagaggaggaggaggtggaggatatggtgataacgat
ggatacaataactatggaggcaatggtggcggctatggtggaggtcccggcgggtatggt
ggtggcaaccggggctatggcggaggcggcggcggtggctatggtaaccagggtggcagc
tatggaggaggaggatacgacaactacaacaatggaggtggtggtggtggtggtggaagc
tacagaggtggtaactatggagctagtagtggtggtgggagcagcagtggaagtggtggt
ggtggtggagactacaatgactttggcaattacaacagccagtcgtcctccagctacggc
ccaatgaaaggaggcagcggctatagtggcggcagtggagggggccggagcagcggccca
tatggtggtggtggtggtggtgttggtggtggtggttacggaggaggctccggtggtgga
tatggagggggctccggaggtcgaaggttctag
DBGET
integrated database retrieval system
