Oncorhynchus mykiss (rainbow trout): 110494232
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Entry
110494232 CDS
T07259
Name
(RefSeq) homeobox protein Hox-C11a
KO
K09296
homeobox protein HoxC/D11
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omy03000
]
110494232
Transcription factors [BR:
omy03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
110494232
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3528
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
110494232
NCBI-ProteinID:
XP_021424814
Ensembl:
ENSOMYG00000034848
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All DBs
Position
17:complement(58469423..58472759)
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AA seq
311 aa
AA seq
DB search
MFNSVNLGNFCSQTRKDRTSEFGDRASCGSNLYLPSCTYYVPEFSAVSSFLPQAPSRQIT
YPYSTNLSQVQPVRDVSYSLEPSSKWHHRGNYASCYSGEELVHRDCLPPSSTMTEMLMKN
ESVYSHHHHHHHHPSSNHPSTGFYSGVGKNNVLPQGFDRFFESTHSGADNSSQENCSQKG
DSSKLDSASQPPAALHSAADPEKDPEDEEENTNSGSCASSSVTKDDSASKTSHSSTPRTR
KKRCPYTKFQIRELEREFFFNVYINKEKRLQLSRMLNLTDRQVKIWFQNRRMKEKKLSRD
RLQYFSGNPLL
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgtttaactcggttaatctgggaaacttctgctcacagacgcgaaaagacaggacttct
gagttcggcgacagagcaagctgtgggtccaacctttacctccccagctgcacctattat
gtccccgaattttctgccgtctcttccttcctgccacaggccccttctcggcaaatcacc
tacccttactccacgaacctctcccaagtgcaaccggttcgagacgtttcttacagtttg
gagccttcaagtaagtggcaccatagaggaaactatgcatcctgctactcaggggaggaa
ctggtacacagggactgccttccgccatcgtccaccatgacagaaatgctgatgaaaaac
gaaagtgtctacagccatcaccatcaccaccaccaccacccaagctccaaccacccttcc
acgggcttttactcgggtgtagggaaaaacaacgttcttccgcagggctttgaccgcttt
ttcgaaagcacacacagcggggcggataacagctcgcaagagaactgttctcagaagggc
gactccagtaaactggattcagcgtctcaaccgcctgccgccctccacagcgccgccgac
ccggagaaagacccagaagatgaagaggaaaacactaattcgggttcttgtgcctcttca
tcggtcacgaaagacgacagcgccagcaaaaccagccactcgagtacaccacgcacgagg
aagaagaggtgtccttacacgaagttccagattcgagaactggaaagagagttcttcttt
aatgtttatatcaacaaggagaaacggctgcagctctccagaatgctaaacctcactgac
cgtcaagtcaaaatctggttccagaaccgccgaatgaaagaaaagaaattaagccgagat
cgcctgcagtatttttctggcaaccccttattgtga
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