Oncorhynchus mykiss (rainbow trout): 110494241
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Entry
110494241 CDS
T07259
Name
(RefSeq) E3 ubiquitin-protein ligase DTX3L isoform X1
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
110494241
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
omy04121
]
110494241
Enzymes [BR:
omy01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110494241
Ubiquitin system [BR:
omy04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
110494241
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
KH_DTX3L
zf-C3HC4
zf-C3HC4_2
zf-RING_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_5
RING_XB3-XBAT31
zf-RING_4
zf-RING_11
RNase_E_G_Thio
Baculo_IE-1
zf-RING_10
Prok-RING_4
DZR_2
Motif
Other DBs
NCBI-GeneID:
110494241
NCBI-ProteinID:
XP_021424824
Ensembl:
ENSOMYG00000037369
UniProt:
A0A8C7TF62
LinkDB
All DBs
Position
17:complement(59012922..59028401)
Genome browser
AA seq
933 aa
AA seq
DB search
MSDIEYMDTSTAEMNRNHEVSGPEQQRPHDLSQIQIHVPTGTSSGPVTVIQSQPQRSSVS
QSAFTYKAEISEDVSEEDASARETADRFSETFGGGTPSATCVNIPSSDDDPDLYQADNDF
KVKHPSAPLYDSRHYGNPRSSSSKEMSVDYPAEGDNGSARNKQSQRDQHSPINPQSTQDV
DLNQAKDEREEKQTTLDEATVYVSVEWPGKAILSWKSVLQKSLQSWLNNNVKETDCTVER
LNGKLAEVKIHPPSVVEDLLKLKETRVTFKDKAKTSATVRFHGANPPSFKPWNQSNSKPS
SMEDLPPTSNMPQDVKLPITVSANIDIGGYKPEVRAALHRHYQTADHKLAVKGSFDEVNQ
FHREFTKIVRETEPEADWNDNAEAAQSMSHNGMKSHEDPGQKEISFPVPLIHFVYLNQAY
RKEMEDIEKRNGVEINAEVKVSIKEVTQKTGRDVMLTKAHQEFSDLFQKCVVDLDSISTH
LTPGDPGDLMNTLKNIQNEETRLVLNVSANGYVVFGPAQSIMAVKKALGVKTTVMTFGMD
HSSTEKASGFAGGPVLRSPKTPRMIGMDIKDPLLSHGLAMDQTHWDLMKSAFHEKITAIK
NTFRVDFMEEKSPGKVKIKTRPTISHTPPAVSLESHAIRALMHLYQKVATSAMSCHLLDP
THAKTVGDKLEEIHPRHRCVWAGENYGPWRLIGLPQHLGPAVKELEMMLKRPMFKEEDKH
KIEYPGDRSSTGAAMGGAVGDGGATGGPEDDNCSICMDRFINKRKLSCSHEFCTECLRKA
VEFSGPRCPLCKDVFGKVEGDQPEGTMKVKHESYHCLPGYRGYGMIVISYDIPSGKQTKK
HSNPGKGFIGAHRIAYLPDNQEGNEVLKLLERAFNQKLIFTVGTSRTTGTDDCVTWNDIH
HKTNIDGGAQGFGYPDPDYLSRVKSELKAKGIE
NT seq
2802 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacatagagtacatggatacatcaactgcagagatgaacagaaaccatgaagtc
tctggaccagaacagcaacggccccatgacctttcgcaaatacagattcatgtgcccaca
ggaacatccagtggccctgtaacagtgatacagtcacagcctcaacggtctagtgtttct
caaagtgcttttacttacaaggcagaaatatccgaggacgtgtctgaagaagacgcatca
gcccgagagactgccgatcggttctctgagacttttggaggagggacaccttcagcaacc
tgtgttaatatcccaagctctgatgatgacccagacctgtatcaagcagataatgacttt
aaggtgaagcatccctcagcacccctgtatgactccaggcactatggcaatcctcggtca
tcctcttccaaagagatgagtgtggattatcctgctgaaggagataatggctctgctaga
aacaaacaatcacagcgagatcaacattctcccatcaacccccaaagcactcaggatgtg
gacctgaatcaggcaaaggacgagagagaggaaaagcagactactttagatgaggctaca
gtctatgtcagtgtggagtggcctgggaaagcaatattgtcatggaagtctgtacttcaa
aaaagtctccagtcgtggttgaataataacgttaaagaaacagattgcaccgtggaaagg
ctgaacggaaaattggccgaagtcaagatacatcccccatcagtcgttgaggaccttctg
aagctgaaggaaacgcgggtgaccttcaaagacaaggccaagacatcagccactgtgcgg
tttcacggggctaacccaccatcatttaaaccctggaatcaatcaaacagtaaacccagc
tcaatggaagacttgcctccaacatccaacatgccacaggatgtcaaactcccaataact
gtaagtgctaacattgacatcggtggctacaaacctgaagtacgggctgcccttcaccgt
cattaccaaaccgccgatcacaagttggctgtaaaagggagctttgatgaagtgaaccag
ttccacagagagtttaccaagatcgtaagggaaaccgagccagaagcggattggaacgat
aatgcagaagcggcacaaagcatgagtcacaatggaatgaagagccatgaagaccctggg
cagaaggaaattagctttccagtcccactgatccactttgtgtacttgaatcaggcctac
cggaaggagatggaggacatagagaaaagaaatggagtcgaaatcaatgcagaagtgaag
gtgtccatcaaagaggtcacacagaaaacaggcagagatgttatgctgaccaaagcccac
caggagttcagtgacctcttccagaagtgtgtagttgatttggacagcatttccacccat
ctgacacctggggatccaggagacctcatgaatacgctgaaaaacatccagaatgaggag
accaggctggtactaaatgtgtctgccaatggctacgttgtgtttgggccggctcagagc
atcatggcagtcaagaaggctcttggggtgaagactacagtaatgacatttggaatggat
cacagctccacagagaaagcatctggatttgctggaggacctgttttgagatctccaaaa
acaccacggatgattgggatggacatcaaagatccacttttgtcacatgggctggccatg
gaccagactcactgggatctaatgaaatctgcctttcatgagaaaataacagcaatcaaa
aatacatttagagtggatttcatggaggaaaagtctccaggcaaagtaaaaattaaaacc
agacctacaatatcacacactccaccggcagtctctctggaaagccacgccatcagagct
ctcatgcacctctaccagaaggttgcgacatcagcgatgagctgccacctgctggaccct
acccatgcaaagactgtgggggacaagctggaggagatccaccctcgacaccgctgtgtc
tgggcaggagaaaactatggtccctggaggctgatcggcctaccgcaacatttgggccct
gctgtcaaagagctagagatgatgctgaaaaggcctatgtttaaagaagaagacaagcac
aagattgagtatcctggcgacagatccagcactggagcagccatggggggagcagtcgga
gatggaggagcaacaggagggcctgaagatgataattgctccatatgcatggacagattt
atcaacaagagaaagttgtcctgtagccatgagttttgtacagaatgtctgaggaaggca
gtggaattctcaggccccagatgtcctttgtgtaaggatgtgtttggaaaggtggaggga
gaccagcctgagggaacaatgaaagtgaaacatgaaagttaccactgcctacctggatac
cgtggctatggcatgatagttatcagctatgatataccaagtggaaaacagacgaagaaa
cattccaaccctggaaaagggttcattggggcccatagaatagcttatctccctgacaac
caggagggcaacgaagtgctgaagttactggagagagctttcaaccagaagctgattttc
acagttgggacctccagaaccactgggacagacgactgtgtgacatggaacgacattcac
cacaagaccaacatcgatggaggggcacaaggttttggttatcctgaccctgactacctg
agcagagtgaaaagtgagctgaaagccaaaggcattgaatga
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