Oncorhynchus mykiss (rainbow trout): 110494249
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Entry
110494249 CDS
T07259
Name
(RefSeq) class E basic helix-loop-helix protein 40
KO
K03729
class B basic helix-loop-helix protein 2
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omy03000
]
110494249
Transcription factors [BR:
omy03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
110494249
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GFIT
Motif
Pfam:
Hairy_orange
HLH
bHLH_NPAS4
YabA
DUF5365
ApbA
Motif
Other DBs
NCBI-GeneID:
110494249
NCBI-ProteinID:
XP_021424850
Ensembl:
ENSOMYG00000047219
LinkDB
All DBs
Position
17:59461314..59465333
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AA seq
425 aa
AA seq
DB search
MEMERIPSAQPTPKHQQAELPDMQGMDFPMYVYKSRRGMKRGDDSKETYKLPHRLIEKKR
RDRINECIAQLKDLLPEHLKLTTLGHLEKAVVLELTLKHVKALTTLLENQQQKILSLQNG
MQIEQSSPSQENSEEIFRSGFHVCAKEVLQYLVNQEGHGDLTPSHMVNHLHKVATEVLQG
PPCSPCKPRSEETTIHYQHHQAHREKPADQPPKPSEGHGKNCVPVIQRRYAHAGGEQSGS
DTDTDSGYGGEQVEHLASHAGYYGQERQLKRALGEKRASFCIKQEDEACHKRSRVESSED
ESLSGGESSSSSSSGHGSYMSAYSPHQAQPHPLCMPFYLIPPSAAAYLPMLEKCWYSGAM
PMIYPGLGGSAQGMPSDRHAPSPSIMMSPRGRSPSPPTVAQSPMDSPAFLQVLKQVLPMN
LETKD
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggaaatggaaaggattccaagtgcgcaacccacccccaagcaccagcaggctgagctg
cctgacatgcaagggatggatttccctatgtatgtatacaaatcccgtcggggaatgaaa
cgaggagatgatagcaaggaaacctacaaactgcctcaccgacttatcgagaagaaaagg
cgtgacaggataaacgagtgcatcgctcagttgaaagatttattgcccgagcacctgaaa
cttacaactcttggccatctggagaaggctgtggttttggagctcacacttaagcatgtg
aaagctctaaccactctactggaaaaccagcagcagaaaatcctcagtctgcagaatggc
atgcaaatcgagcagtcctctcccagccaggagaacagtgaggagatcttccgctcaggc
ttccatgtctgtgccaaggaggtgctgcagtacctggtcaaccaggagggtcacggtgac
cttacaccctcccacatggtcaaccacctgcacaaggtggccactgaggtcctccagggt
cctccctgtagcccctgcaaaccccggtctgaagagaccaccatccactaccaacatcat
caggcccacagggagaagcctgcagaccagccccccaagcccagtgaaggccatgggaag
aactgcgttcccgtcatccagcggaggtatgcccatgcgggcggtgagcagagcggcagc
gatacagacacagacagcggctacggtggcgagcaggttgagcatctggcgtcgcatgca
gggtattacggccaggagagacagctgaagagggcactgggagaaaagagggcgtcattt
tgcattaagcaggaagatgaggcgtgccacaaacgcagccgggtcgagtcatccgaggac
gagtctctctcaggcggagagtcatcctcatcctcctccagcggccacggcagctacatg
agcgcctactcccctcaccaggcccaacctcatcccctttgcatgcccttctacctcatc
cccccctctgccgccgcctatctgcccatgctggagaagtgctggtactcaggggccatg
cccatgatttaccctggcctgggaggctccgcgcagggcatgcctagtgacaggcatgcc
ccctctccctcgatcatgatgtcccccagggggcgctctccctctccccctaccgtagcc
caaagccccatggactccccggccttcctccaagtgttaaagcaggtacttcccatgaac
ctggaaaccaaagactga
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