Oncorhynchus mykiss (rainbow trout): 110494255
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Entry
110494255 CDS
T07259
Name
(RefSeq) protein polybromo-1 isoform X1
KO
K11757
protein polybromo-1
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
110494255
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
omy03021
]
110494255
03036 Chromosome and associated proteins [BR:
omy03036
]
110494255
Transcription machinery [BR:
omy03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
110494255
Chromosome and associated proteins [BR:
omy03036
]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
110494255
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
BAH
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
110494255
NCBI-ProteinID:
XP_036806244
Ensembl:
ENSOMYG00000047576
LinkDB
All DBs
Position
17:60063250..60078437
Genome browser
AA seq
1617 aa
AA seq
DB search
MGSKRRRTTSPSSSVSGGDFDDGQPSSSASSVGRKRRRTSNIPTVDPIAVCHELYNTIRD
YKDDQGRMLCELFIRAPKRRNQSDYYDVVTQPIDMMKIQQKLKMEEYDDVEQITADFQLL
FNNAKAYYKSDSPEYRAACKLWDLYLRTKNEFVQRGDYDDDDEDGDDAQNNPGGSNEDEN
APNCLKEVLEQLLDAVVTFSEPSGHLVSDLFQKLPSKVQYPDYYAIIKDPIDLKIIAQKI
QMSHYRSVGAMAKDIDLLAKNAKMYNEPGSQVFKDANTIKKVFAQRKTEIEHAEPIKSSI
RIRNRRSAQGDRLSAITMALQYDSDDDGILAGSVHYDEGESEAESMHHSMDMSNPIFQLY
EAVRGGRNSQGQLISEPFLQLPSRKDYPDYFQQISQPISLHQIRNKMKNNEYESVDQLDA
DLTLMFENAKRYNVPHSSIYKRVLKLQHIQQLKRTELLRREDDSMDGDSMLSSTMSDTGS
TKRKSHKKNTKKNRMKALYSAVTEAREMGTGRRLCELFMVKPSKKDYPDYYKIILEPVDL
RIIDHNIRSEKYMTEDALLEDMKLMFRNARHYNEEGSQVYNDANVLEKVIKDKRRDLGPT
PDDDDMSPKLKIRKSGITPKKSKYLTPLQQKLNELYEAVKNFTDKRGRRLSTIFLRLPSR
AELPNYYIAIKKPVDMEKVRSHMLANKYQDVDALVEDLVLMFNNACTYNEPESLIYRDAL
VLHRVLLETRRDLEGGEDAHVPDVARLIQELIRSLFVSVLGHQDDEGRCYSDSLAEIPAT
DPSSPDRPPLNFEIIRANVDRGRYKRLDVFQDHMFEVLEKARRMHRTDSEIFEDAVELQQ
FFIRIRDELCKNGEILLTPALSYTSKHLHSDVEKEKKEKLPKEIEEDKLKREEEKKEAEK
SEDPAGGAWQSGLQRTYSQDCSFKDSMYHVGDYVYVEPAEPNLQPHIVCIERLWQDDAGE
KWLYGCWFYRPNETFHLATRKFLEKEVFKSDYFNKIPVSKILGKCVVMFVKDYFKLHPEG
FRADDVYVCESRYSAKTKSFKKIKMWTMPLSSVRFVPRGVPLPVVRVASMFAPKQEEEKP
AEIQEEGKALDTMDKEREDVILDMTNGEPGCQYYEQLCYNDTWLKVGDCIYIRSHGLVRH
RVGRIEKMWMRDGAAYFFGPIFIHPEETEHEPTRMFYKKEVFLSNLEESCPMTCIIGKCA
VSSFKEYLSCRPTEVPEEDVLLCESRYIESDKQMKKFKGLKRFSLSGKVVEDEIYYFRKL
IVPQKEPSPLLDRKIAVLEAKFADMTDEELEDLGEDDGELGDTSIPQLQSPMAGSDMDMP
YTPPQVRAATYTGQMCGHVVKSTPKSMKGMSKKEGSKRKINMSGYILFSSEMRAVIKAQH
PDFSFGELSRLVGTEWRNLESPKKAEYEERAAKVAEQQERERAAQQLAFPRAGMMGSYMP
HMMLQDLVDGMFSMTGMPPHHMRLPLLPHHHLMPGIPGFPGMPYPGVNTGAPGAYGTQIG
LGQQAPPPYPGQGQPALQQPSTPIFVAPPPKPQRLLHSEAYLKYIEGLNAESSTISKWDQ
TLSARKKDVRLTKEQESRLPSHWLKSKGAHSTMADALWRLRDLMLRDTMNIRQTYNL
NT seq
4854 nt
NT seq
+upstream
nt +downstream
nt
atgggctcaaaaaggagaaggactacgtccccctctagtagtgtcagtgggggggacttt
gacgatggacagccttcatcctcagcatcttcggtaggtcggaaaaggagaagaacctca
aatattcccactgttgatccaattgcagtatgccatgaattgtacaacacaatcagagat
tataaggatgaccagggaagaatgttatgtgagctgttcataagagcaccaaagagacgg
aatcaatcggattactatgacgttgtgactcagcctattgacatgatgaagatccagcag
aagctgaagatggaggagtacgatgatgtggagcagataacggctgactttcagctctta
ttcaacaatgcaaaggcatactacaagtcggattctccagagtacagagcagcctgtaag
ctgtgggacctctacctgcgtactaagaatgagtttgttcagcggggggattatgatgac
gatgatgaggacggggacgatgcacaaaataatcctggagggtcaaatgaggatgagaat
gcacccaattgcctgaaggaggtccttgagcagctgctggatgctgtggtgacattctcc
gagccctcagggcatctcgtcagtgatctattccagaaactgccctctaaagtgcaatac
ccagactattatgccataataaaggacccaatagatctgaaaatcattgcccagaagata
cagatgagccactacagaagtgttggtgccatggcaaaagacatagatcttctggctaag
aatgctaaaatgtacaatgagcctgggtcacaagtttttaaggatgccaacaccatcaaa
aaggtctttgcacagagaaagacagaaattgagcatgctgagccaatcaagtccagtatt
cgtatcaggaacagaaggtcagcccagggagaccggctctcagctattaccatggctctt
cagtatgatagtgatgacgatggcattctggctgggtctgtccactatgacgagggggag
tcagaggcagagagcatgcaccacagcatggacatgagtaaccccatcttccagctgtac
gaggctgtgcgtggcggcaggaacagccagggccaactcatctccgagcccttcctccag
ctgccctccaggaaagactacccagactacttccagcagatcagccagcccatctccctg
caccagattaggaacaagatgaagaacaacgagtatgagagtgttgatcagctagacgcc
gacctcactctgatgtttgagaacgccaagcgctacaatgtgcctcattcctctatctat
aagcgtgtgttgaaactccagcacattcagcagctaaagagaacagagctattgaggagg
gaggacgacagcatggatggggacagcatgctctcttctaccatgtctgatactggcagc
actaagaggaagagccataagaaaaacaccaagaagaaccggatgaaggccctgtactcc
gcagtgacggaggcccgggagatgggcacaggccggaggctctgtgagctcttcatggtc
aagccttccaagaaggactacccggactactacaagatcatcctggagcccgtggacctg
aggatcatcgaccacaacatccgctctgagaagtacatgactgaggacgctctgctggag
gacatgaagctcatgttccgcaacgcacgccactacaatgaggagggctcacaggtctat
aacgatgccaacgtcctggagaaagtcataaaagacaaacggagggatcttggtccaacg
cctgacgatgatgacatgtcaccaaagttgaaaataaggaagagtggcatcacgcctaag
aagtccaagtacctgacccccctgcagcagaagctgaacgagctgtatgaggcggtgaag
aacttcacagacaagcgtggccgccgcctcagcaccatcttcctgcggcttccatcgcgc
gccgaactgcccaactactacatcgccatcaagaagcccgtggacatggaaaaggtcagg
agccacatgctggccaacaagtaccaggatgtagacgcactggtggaggacctggtgctg
atgttcaacaacgcctgcacctacaatgagccagagtctctgatctaccgcgacgctctt
gtgctgcaccgtgttctgctggagactcgccgggacctggagggaggcgaggacgcccat
gtgcccgacgtggcccgcctcatccaggagctcatccgcagcctcttcgtctccgtgctt
ggtcaccaggatgacgaggggcgttgctacagcgactcgctggctgagatccccgctact
gaccccagcagccccgacagaccgccgctcaactttgagatcatcagagctaacgtggac
cggggacgctacaagagactggacgtgttccaggatcacatgtttgaggtgctggagaag
gccaggcgcatgcacaggacggactctgagatctttgaggatgcggtggagctgcagcag
ttcttcatccggatccgagatgagctgtgtaagaatggagagatcctgctcacccccgcc
ctcagctacacctccaaacacctgcacagtgacgtggagaaggaaaagaaggagaagctg
cccaaggagatagaggaggacaagctcaagagggaggaggagaaaaaagaagctgagaag
agtgaggaccctgctggaggggcgtggcagtctggtctccagcgtacctacagccaggac
tgcagcttcaaagacagcatgtaccacgtgggagactatgtgtacgtggagcctgctgag
cccaacctgcagccgcatatcgtctgcattgagcgactgtggcaggatgatgcaggtgag
aagtggctgtatggctgctggttctacaggccgaatgaaaccttccatctcgctacacgc
aagttcctggagaaggaggtcttcaagagcgactacttcaacaagattcctgtcagcaag
atactgggcaaatgtgttgtcatgtttgttaaggactactttaagcttcacccagagggc
ttcagggcagacgatgtgtatgtctgtgagtctcgctactcagccaagaccaagtccttc
aagaagatcaagatgtggaccatgcccctgagctccgttaggtttgtccctcggggcgtc
ccgttgcctgtagtccgggttgcatccatgtttgcccctaaacaagaagaagagaagcct
gcagagatacaagaagagggcaaagccttggacactatggataaggagagggaggatgta
atcctggacatgaccaatggggagccaggctgccaatactatgagcagctctgctacaat
gacacctggctgaaagtgggagactgcatctatattcgctcacatggactagtgcgccac
cgagtaggcaggattgagaagatgtggatgcgggacggagcggcctacttctttgggcct
attttcatccacccagaggagacagaacacgagcccaccaggatgttctacaagaaggaa
gtgttccttagcaacctggaggagtcttgccccatgacctgtatcatagggaagtgtgcg
gtgtcctccttcaaggagtacctttcgtgccggcccacggaagtgcctgaggaggacgtt
ctgctttgtgagagtcgctacatcgagagtgacaaacagatgaagaagttcaagggtctg
aagcgcttctccctctctgggaaggtggtggaggacgagatctattacttcaggaagctg
atcgtgccccagaaggagccatcccctctgctggacaggaagatcgcagtgctggaggcc
aagtttgccgacatgacagatgaggagttggaggacctgggggaggatgatggggagctg
ggagacacctccataccccagctccagagccccatggcaggcagcgacatggacatgcct
tacacccctccacaggtcagagcagcaacatacactgggcaaatgtgtggtcatgttgtg
aagtccactcccaagtccatgaaggggatgtccaagaaggagggctccaagaggaagatc
aacatgagtggctacatcctgttcagcagtgagatgcgagcggtcatcaaggcccaacac
ccagacttctctttcggggaactcagccgtctggtgggcaccgagtggaggaacctggag
tctcccaagaaagctgagtatgaggagcgagcagctaaagttgccgagcagcaggagcgg
gagagggctgcccagcagctggctttccctagagcaggcatgatgggttcatatatgcca
cacatgatgctgcaggacctagttgacggcatgtttagtatgactggcatgccaccacat
cacatgaggttgcctctcttgccccatcatcacctaatgccaggcatccctgggttccct
ggcatgccatacccgggtgtcaacacaggtgcccctggagcctatggaacccagattggt
cttgggcagcaggccccgccaccctatccaggacagggccagcctgccctccagcagccc
tcaacacccatatttgtagccccgccacccaagccccagcgcctgctccattcggaggcg
tacctgaagtacattgagggactcaatgcagagtcctccaccatcagcaagtgggaccaa
actctctcagctcgaaagaaagatgtgcggctgaccaaagagcaggagagccggctgccg
tcccattggctgaagagcaagggcgcccattccaccatggcggacgcactgtggcgtctg
cgagacttgatgctgcgtgacacaatgaacatccgccagacgtacaacctgtag
DBGET
integrated database retrieval system