KEGG   Oncorhynchus mykiss (rainbow trout): 110494255
Entry
110494255         CDS       T07259                                 
Name
(RefSeq) protein polybromo-1 isoform X1
  KO
K11757  protein polybromo-1
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Pathway
omy03082  ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:omy00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    110494255
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:omy03021]
    110494255
   03036 Chromosome and associated proteins [BR:omy03036]
    110494255
Transcription machinery [BR:omy03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     110494255
Chromosome and associated proteins [BR:omy03036]
 Eukaryotic type
  Chromatin remodeling factors
   PBAF complex
    110494255
SSDB
Motif
Pfam: Bromodomain BAH HMG_box HMG_box_2 HMG_WDHD1
Other DBs
NCBI-GeneID: 110494255
NCBI-ProteinID: XP_036806244
Ensembl: ENSOMYG00000047576
LinkDB
Position
17:60063250..60078437
AA seq 1617 aa
MGSKRRRTTSPSSSVSGGDFDDGQPSSSASSVGRKRRRTSNIPTVDPIAVCHELYNTIRD
YKDDQGRMLCELFIRAPKRRNQSDYYDVVTQPIDMMKIQQKLKMEEYDDVEQITADFQLL
FNNAKAYYKSDSPEYRAACKLWDLYLRTKNEFVQRGDYDDDDEDGDDAQNNPGGSNEDEN
APNCLKEVLEQLLDAVVTFSEPSGHLVSDLFQKLPSKVQYPDYYAIIKDPIDLKIIAQKI
QMSHYRSVGAMAKDIDLLAKNAKMYNEPGSQVFKDANTIKKVFAQRKTEIEHAEPIKSSI
RIRNRRSAQGDRLSAITMALQYDSDDDGILAGSVHYDEGESEAESMHHSMDMSNPIFQLY
EAVRGGRNSQGQLISEPFLQLPSRKDYPDYFQQISQPISLHQIRNKMKNNEYESVDQLDA
DLTLMFENAKRYNVPHSSIYKRVLKLQHIQQLKRTELLRREDDSMDGDSMLSSTMSDTGS
TKRKSHKKNTKKNRMKALYSAVTEAREMGTGRRLCELFMVKPSKKDYPDYYKIILEPVDL
RIIDHNIRSEKYMTEDALLEDMKLMFRNARHYNEEGSQVYNDANVLEKVIKDKRRDLGPT
PDDDDMSPKLKIRKSGITPKKSKYLTPLQQKLNELYEAVKNFTDKRGRRLSTIFLRLPSR
AELPNYYIAIKKPVDMEKVRSHMLANKYQDVDALVEDLVLMFNNACTYNEPESLIYRDAL
VLHRVLLETRRDLEGGEDAHVPDVARLIQELIRSLFVSVLGHQDDEGRCYSDSLAEIPAT
DPSSPDRPPLNFEIIRANVDRGRYKRLDVFQDHMFEVLEKARRMHRTDSEIFEDAVELQQ
FFIRIRDELCKNGEILLTPALSYTSKHLHSDVEKEKKEKLPKEIEEDKLKREEEKKEAEK
SEDPAGGAWQSGLQRTYSQDCSFKDSMYHVGDYVYVEPAEPNLQPHIVCIERLWQDDAGE
KWLYGCWFYRPNETFHLATRKFLEKEVFKSDYFNKIPVSKILGKCVVMFVKDYFKLHPEG
FRADDVYVCESRYSAKTKSFKKIKMWTMPLSSVRFVPRGVPLPVVRVASMFAPKQEEEKP
AEIQEEGKALDTMDKEREDVILDMTNGEPGCQYYEQLCYNDTWLKVGDCIYIRSHGLVRH
RVGRIEKMWMRDGAAYFFGPIFIHPEETEHEPTRMFYKKEVFLSNLEESCPMTCIIGKCA
VSSFKEYLSCRPTEVPEEDVLLCESRYIESDKQMKKFKGLKRFSLSGKVVEDEIYYFRKL
IVPQKEPSPLLDRKIAVLEAKFADMTDEELEDLGEDDGELGDTSIPQLQSPMAGSDMDMP
YTPPQVRAATYTGQMCGHVVKSTPKSMKGMSKKEGSKRKINMSGYILFSSEMRAVIKAQH
PDFSFGELSRLVGTEWRNLESPKKAEYEERAAKVAEQQERERAAQQLAFPRAGMMGSYMP
HMMLQDLVDGMFSMTGMPPHHMRLPLLPHHHLMPGIPGFPGMPYPGVNTGAPGAYGTQIG
LGQQAPPPYPGQGQPALQQPSTPIFVAPPPKPQRLLHSEAYLKYIEGLNAESSTISKWDQ
TLSARKKDVRLTKEQESRLPSHWLKSKGAHSTMADALWRLRDLMLRDTMNIRQTYNL
NT seq 4854 nt   +upstreamnt  +downstreamnt
atgggctcaaaaaggagaaggactacgtccccctctagtagtgtcagtgggggggacttt
gacgatggacagccttcatcctcagcatcttcggtaggtcggaaaaggagaagaacctca
aatattcccactgttgatccaattgcagtatgccatgaattgtacaacacaatcagagat
tataaggatgaccagggaagaatgttatgtgagctgttcataagagcaccaaagagacgg
aatcaatcggattactatgacgttgtgactcagcctattgacatgatgaagatccagcag
aagctgaagatggaggagtacgatgatgtggagcagataacggctgactttcagctctta
ttcaacaatgcaaaggcatactacaagtcggattctccagagtacagagcagcctgtaag
ctgtgggacctctacctgcgtactaagaatgagtttgttcagcggggggattatgatgac
gatgatgaggacggggacgatgcacaaaataatcctggagggtcaaatgaggatgagaat
gcacccaattgcctgaaggaggtccttgagcagctgctggatgctgtggtgacattctcc
gagccctcagggcatctcgtcagtgatctattccagaaactgccctctaaagtgcaatac
ccagactattatgccataataaaggacccaatagatctgaaaatcattgcccagaagata
cagatgagccactacagaagtgttggtgccatggcaaaagacatagatcttctggctaag
aatgctaaaatgtacaatgagcctgggtcacaagtttttaaggatgccaacaccatcaaa
aaggtctttgcacagagaaagacagaaattgagcatgctgagccaatcaagtccagtatt
cgtatcaggaacagaaggtcagcccagggagaccggctctcagctattaccatggctctt
cagtatgatagtgatgacgatggcattctggctgggtctgtccactatgacgagggggag
tcagaggcagagagcatgcaccacagcatggacatgagtaaccccatcttccagctgtac
gaggctgtgcgtggcggcaggaacagccagggccaactcatctccgagcccttcctccag
ctgccctccaggaaagactacccagactacttccagcagatcagccagcccatctccctg
caccagattaggaacaagatgaagaacaacgagtatgagagtgttgatcagctagacgcc
gacctcactctgatgtttgagaacgccaagcgctacaatgtgcctcattcctctatctat
aagcgtgtgttgaaactccagcacattcagcagctaaagagaacagagctattgaggagg
gaggacgacagcatggatggggacagcatgctctcttctaccatgtctgatactggcagc
actaagaggaagagccataagaaaaacaccaagaagaaccggatgaaggccctgtactcc
gcagtgacggaggcccgggagatgggcacaggccggaggctctgtgagctcttcatggtc
aagccttccaagaaggactacccggactactacaagatcatcctggagcccgtggacctg
aggatcatcgaccacaacatccgctctgagaagtacatgactgaggacgctctgctggag
gacatgaagctcatgttccgcaacgcacgccactacaatgaggagggctcacaggtctat
aacgatgccaacgtcctggagaaagtcataaaagacaaacggagggatcttggtccaacg
cctgacgatgatgacatgtcaccaaagttgaaaataaggaagagtggcatcacgcctaag
aagtccaagtacctgacccccctgcagcagaagctgaacgagctgtatgaggcggtgaag
aacttcacagacaagcgtggccgccgcctcagcaccatcttcctgcggcttccatcgcgc
gccgaactgcccaactactacatcgccatcaagaagcccgtggacatggaaaaggtcagg
agccacatgctggccaacaagtaccaggatgtagacgcactggtggaggacctggtgctg
atgttcaacaacgcctgcacctacaatgagccagagtctctgatctaccgcgacgctctt
gtgctgcaccgtgttctgctggagactcgccgggacctggagggaggcgaggacgcccat
gtgcccgacgtggcccgcctcatccaggagctcatccgcagcctcttcgtctccgtgctt
ggtcaccaggatgacgaggggcgttgctacagcgactcgctggctgagatccccgctact
gaccccagcagccccgacagaccgccgctcaactttgagatcatcagagctaacgtggac
cggggacgctacaagagactggacgtgttccaggatcacatgtttgaggtgctggagaag
gccaggcgcatgcacaggacggactctgagatctttgaggatgcggtggagctgcagcag
ttcttcatccggatccgagatgagctgtgtaagaatggagagatcctgctcacccccgcc
ctcagctacacctccaaacacctgcacagtgacgtggagaaggaaaagaaggagaagctg
cccaaggagatagaggaggacaagctcaagagggaggaggagaaaaaagaagctgagaag
agtgaggaccctgctggaggggcgtggcagtctggtctccagcgtacctacagccaggac
tgcagcttcaaagacagcatgtaccacgtgggagactatgtgtacgtggagcctgctgag
cccaacctgcagccgcatatcgtctgcattgagcgactgtggcaggatgatgcaggtgag
aagtggctgtatggctgctggttctacaggccgaatgaaaccttccatctcgctacacgc
aagttcctggagaaggaggtcttcaagagcgactacttcaacaagattcctgtcagcaag
atactgggcaaatgtgttgtcatgtttgttaaggactactttaagcttcacccagagggc
ttcagggcagacgatgtgtatgtctgtgagtctcgctactcagccaagaccaagtccttc
aagaagatcaagatgtggaccatgcccctgagctccgttaggtttgtccctcggggcgtc
ccgttgcctgtagtccgggttgcatccatgtttgcccctaaacaagaagaagagaagcct
gcagagatacaagaagagggcaaagccttggacactatggataaggagagggaggatgta
atcctggacatgaccaatggggagccaggctgccaatactatgagcagctctgctacaat
gacacctggctgaaagtgggagactgcatctatattcgctcacatggactagtgcgccac
cgagtaggcaggattgagaagatgtggatgcgggacggagcggcctacttctttgggcct
attttcatccacccagaggagacagaacacgagcccaccaggatgttctacaagaaggaa
gtgttccttagcaacctggaggagtcttgccccatgacctgtatcatagggaagtgtgcg
gtgtcctccttcaaggagtacctttcgtgccggcccacggaagtgcctgaggaggacgtt
ctgctttgtgagagtcgctacatcgagagtgacaaacagatgaagaagttcaagggtctg
aagcgcttctccctctctgggaaggtggtggaggacgagatctattacttcaggaagctg
atcgtgccccagaaggagccatcccctctgctggacaggaagatcgcagtgctggaggcc
aagtttgccgacatgacagatgaggagttggaggacctgggggaggatgatggggagctg
ggagacacctccataccccagctccagagccccatggcaggcagcgacatggacatgcct
tacacccctccacaggtcagagcagcaacatacactgggcaaatgtgtggtcatgttgtg
aagtccactcccaagtccatgaaggggatgtccaagaaggagggctccaagaggaagatc
aacatgagtggctacatcctgttcagcagtgagatgcgagcggtcatcaaggcccaacac
ccagacttctctttcggggaactcagccgtctggtgggcaccgagtggaggaacctggag
tctcccaagaaagctgagtatgaggagcgagcagctaaagttgccgagcagcaggagcgg
gagagggctgcccagcagctggctttccctagagcaggcatgatgggttcatatatgcca
cacatgatgctgcaggacctagttgacggcatgtttagtatgactggcatgccaccacat
cacatgaggttgcctctcttgccccatcatcacctaatgccaggcatccctgggttccct
ggcatgccatacccgggtgtcaacacaggtgcccctggagcctatggaacccagattggt
cttgggcagcaggccccgccaccctatccaggacagggccagcctgccctccagcagccc
tcaacacccatatttgtagccccgccacccaagccccagcgcctgctccattcggaggcg
tacctgaagtacattgagggactcaatgcagagtcctccaccatcagcaagtgggaccaa
actctctcagctcgaaagaaagatgtgcggctgaccaaagagcaggagagccggctgccg
tcccattggctgaagagcaagggcgcccattccaccatggcggacgcactgtggcgtctg
cgagacttgatgctgcgtgacacaatgaacatccgccagacgtacaacctgtag

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