Oncorhynchus mykiss (rainbow trout): 110494269
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Entry
110494269 CDS
T07259
Symbol
fancd2
Name
(RefSeq) Fanconi anemia group D2 protein
KO
K10891
fanconi anemia group D2 protein
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
110494269 (fancd2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
omy03400
]
110494269 (fancd2)
DNA repair and recombination proteins [BR:
omy03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FANCD2-I complex
110494269 (fancd2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FancD2
FANCI_S2
CCDC53
Motif
Other DBs
NCBI-GeneID:
110494269
NCBI-ProteinID:
XP_021424885
Ensembl:
ENSOMYG00000047809
LinkDB
All DBs
Position
17:complement(60945549..60970081)
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AA seq
1454 aa
AA seq
DB search
MMRKKRRSSVDKSESAAPPDVSKSKKSRTTGHQSKTTAQEDTSIDSVFGQFLHEAGVILR
QGSTSNEIAVDQVVFQKRLQQRLKKSPRYPSIVQEFITGLESHIEDPERFRNCLLPCVPR
LADGDSSSVSSFQESLLRMLLGIEMLQVLVINTLFEKLPEFMFDGAGEDGLNIPRVIVNQ
LKWLDRIIDSKELAGKLMQLVSVASVEIQCDIITSLPEILEDSQHSDIARELNALLQENT
QLTVPILDAFSSLNLSSTLLAEVRVSVMATLSAVQLEDLPVVVKFILHSISPSDALEVVC
DLRKKLELELCVLHPVLHASQSRMKSKGTTESSNTSASSSSQDSVALVLDGIKSAVRFQK
TTSEAWLKAIENVDTAEDHKVIDLLVLFILHSTNANHSRRGAERVLKVKVRAGQIQEALL
QKTFRGYAQVMRGYFPSILALAQSLLRSPDPCVVPFGGHMYRLSFTAFDSYCQQEVVGSL
VTHVCSGVGGEVDVALELLCGLVTEKPSEMALYAVFVKGILDYMENLTPQQIRRLFHLLS
GLAFGQQQQGTHIQDDMHIVVRKQLSSTVPKYKRIGIIGAVMVVGSMGASRPKVEDSQGG
TLPKETYRQVTALLELVRSCSESSPEAAALYYDELANLVLTCTLDPLVQAWIGKSVLEDF
QEDFVVDLGPDITGSFPFPACMMYNLDDEESQGGIAINLLQLLSDDLQHKGELWSQTVNN
KTQRRVSPLCLSPFFRLLRLCEEQQHQGDLEEIDALLGCPLILTDMDVVEKSESLSKPER
EFLCGLLFQTINWFREVVNAFCSQKDPEMKMKVVTRLQNITYLQTLLERTLAATPGYSPP
LANFDGESTEVAPVSSSSAAPKKGKKKGTGKKRKAPAKNPSADSSQLEEGTEAEETQQDD
AEKEKVQEATRPGVSLVSYRHFFRELDMEVLSVLQCGLLSRSLLDSELHSKVREEVQLGP
AELVFLLEDMWRKLEFSLTAAPAKRVPFFKGKTDKSVGFSHLQQKSPKDIAACCVQLLPT
LCTHLENCHNHFQTLLSENQGVVDASGLDVREHQLLSSAYQLLLQVLHTTFSWSGFSQPE
HRGLLKKTLGVLADRLKEGGPELTMDQLIKNSFEYLLNFHSTVPSLSIALCLSQLLSTVA
DRGGHQATYREQTATLARRFLCQEWVTTSGDREKGPKHNETLQTLLSIYLEHTDDVLKAV
EEIAGEGIPELLNSAKDASSRTWPTLNRLTFLVFYKGMMGVLEKAVRKIPPGRNSDNTEV
MSEKLLTWNLAVRDFHILVNLVKVFDNRPVLNVCLKYGRLFLESFLKLGMPLLDFSFKKH
KEDVQSLLKTFQLSTRQLHHMCGHSKIRQDTILTNHVPALKKSLEQFVYRVKAMLTLNHC
QEAFWLGNLKNRDLKGEEILSQRSQGSDEEEEAGSPLPQEQSEDEAQESDSDGKKKGNRK
AEGDDDEITDDSDD
NT seq
4365 nt
NT seq
+upstream
nt +downstream
nt
atgatgcgaaagaagagacgctcctctgtggacaaaagcgaaagtgctgcaccaccagat
gtgtcaaagtccaagaagagtaggaccactggccatcagtccaagaccacggctcaggag
gacaccagtattgactcagtctttggccaatttctgcacgaggctggtgttatcttgaga
cagggcagtacatccaatgagattgctgtggaccaagtggttttccaaaagagactgcag
caacgtctgaagaagagtcctagataccccagtattgtgcaggagttcatcacaggactg
gagtctcacattgaggatcctgagaggttcaggaactgcctcctcccctgtgtaccacgc
ctggccgatggggactcaagctctgtcagctcatttcaggagagtctgctgcgcatgctg
ctggggatcgagatgctgcaggttttggtaatcaacactttgtttgagaagcttcccgag
ttcatgtttgatggtgccggagaggatggtctcaatatccctcgtgttattgtcaaccag
ctcaagtggttggacagaatcatagacagcaaggagttagcaggtaagctgatgcagctg
gtttctgtggcgtcggttgagatacagtgtgacatcatcaccagtctgccagagatcctg
gaggactcccagcacagtgacattgccagggaactaaacgccttactccaggaaaacact
cagctgactgtgccaatcctggatgccttctcaagcttgaatctgagctccactctgttg
gctgaggtacgtgtgtctgtcatggccaccctgtctgctgtccagctggaggacctgcct
gtggtggtgaagttcatcctacactccatctctccctcagatgccctagaggtggtgtgt
gacctgcgtaagaagctggagttggagctgtgtgttctccatccggtgctgcacgcttct
cagagccgcatgaagagcaaggggacaaccgagtcctccaacacctcagcatccagcagc
agccaggacagtgttgccttggtgttggatggcattaagtctgcagtgcgcttccagaag
accacctctgaggcctggcttaaggctatagagaatgtcgacacagcagaggatcacaag
gtcattgacctgctggtgctgttcatcctgcactccaccaatgccaaccacagtcggcgt
ggagctgagagggtgctgaaggtcaaagtgagagcaggacaaatccaggaggctctgcta
cagaaaacgttcaggggctatgcacaggtgatgagaggttactttccctccatcttggcc
ctggcccagagtctgctgcgttcccctgacccttgtgtggtgcccttcggtggacacatg
tacagactctcattcactgcctttgactcctactgccagcaggaggtggtgggctccctg
gtgacccatgtttgcagtggcgtgggtggtgaggtggacgtggctctggagctgctttgt
ggcctggtgacagagaaaccctctgagatggccctctacgccgtctttgtcaagggtatc
ctggactacatggagaacctgactccccagcagatccgcaggctcttccacctgcttagt
ggcctggccttcggacagcagcagcagggcacacacatccaggatgacatgcacatagtg
gtccgtaagcagctctccagcaccgtgcccaagtacaagcgcattggcatcatcggtgcc
gtcatggtggtgggcagcatgggggccagcaggcccaaagtggaggattctcaaggtggc
acattgcccaaggagacatacagacaggtgacggccctgctggagctggtacggtcgtgc
agtgaaagctctcctgaagctgctgctctctactatgatgaactagccaacctggtcctc
acctgcactctggaccctctggtgcaggcctggatagggaagagtgtgctggaggacttc
caggaagactttgtggtggatctgggaccagatataactgggtccttccccttccccgcc
tgtatgatgtacaacctggatgatgaagagagtcagggaggcattgctatcaacctgctg
caactactgtctgatgacctccaacacaagggggagctgtggagccagactgtgaacaac
aagacccagaggcgagtgtctcctctgtgcctgtctccgttcttccggctgctcaggctg
tgtgaggagcagcagcaccagggagacctggaggagatcgatgccctactgggctgccct
ctgatcttgactgacatggatgtggtggagaagtcagagagcctgtccaagcctgagaga
gagttcctctgtggcctgctattccagaccatcaactggtttagagaggttgtgaatgca
ttctgcagtcagaaagaccctgagatgaagatgaaggtggtgactcgtcttcagaacatc
acctacctccagactctattggagaggactttggcagcaacccctggctattcccctcct
ctagccaactttgatggggagagtacagaggtagctccagtgtctagctcctctgctgct
ccaaagaagggaaagaaaaagggtactggtaagaagaggaaagcccctgctaagaacccg
tcagcagacagctctcagctggaggagggcacagaggcagaggagacccagcaggatgat
gcagagaaggagaaggttcaggaggccactaggcctggggtcagtctggtttcctaccgg
cacttcttcagagagctggacatggaggtgctcagtgtgctgcagtgtggcctgctctcc
cgctctctgctggacagtgagcttcacagcaaggtgcgtgaggaggtgcagctgggccca
gcagagttagtcttcctgctggaggatatgtggcgcaaactggagttcagtctgactgct
gcccctgccaagagagtcccattcttcaagggaaaaacagacaagagcgtgggcttctcc
cacttgcagcagaagagccctaaggacatcgctgcctgctgtgtccagctgctgcccacc
ctctgtacccacctggagaactgccacaatcacttccagactcttctgtctgagaaccag
ggggtggtggacgcctcaggcctggatgtgagagagcatcaactgctatcctcagcctac
cagctcctcctacaggttctacacaccaccttcagctggtctggtttctcccagccagag
caccgtggcctgctgaagaagactctgggagtgttggctgaccgcttgaaggagggaggg
cctgaactgaccatggaccagctcataaaaaacagctttgagtacctgctgaacttccat
agcacggttcctagcctcagcatagctctctgtctctcccagctgcttagcactgtggct
gatagaggagggcaccaggctacatacagggagcagactgcaaccctagcccggcggttc
ctgtgccaggagtgggtgactaccagcggagacagagagaaaggacccaaacacaacgag
actctccaaactctcctcagtatttacctggagcacactgatgatgttctgaaggcggtg
gaggagatagctggagagggcatccctgagctcctcaactcagccaaagatgccagctct
agaacttggcccactctcaacaggctgacgttcctggtgttctataaggggatgatggga
gtgctggagaaggctgtgaggaagattccccctggcagaaacagtgacaacactgaggtg
atgagtgagaagctgctaacatggaacctggctgtcagagacttccacatcctggtcaac
ctggttaaggtgtttgacaacagaccagtgctcaatgtgtgcctgaagtatggccgtctt
ttcctggagtctttcctgaagctggggatgccattgttggatttcagttttaaaaagcac
aaggaggatgtccagagcctgctgaagaccttccagctcagcaccaggcagctccaccac
atgtgtggacactccaagatccgccaggacaccatcttgaccaaccacgtgccagccctg
aagaagagcctggagcagtttgtgtacagagtgaaggccatgctcaccctcaaccactgt
caggaggccttctggctgggtaacctcaagaacagagacctcaagggtgaagagatcctc
tctcagcgctcacaggggagtgatgaagaggaggaggcaggctccccgcttcctcaggag
cagtcagaggatgaggcccaggaaagcgactccgatgggaagaagaaaggcaaccggaag
gcagagggggacgatgatgaaatcacagatgactcagatgattag
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integrated database retrieval system