Oncorhynchus mykiss (rainbow trout): 110494340
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Entry
110494340 CDS
T07259
Name
(RefSeq) interferon regulatory factor 6 isoform X2
KO
K10154
interferon regulatory factor 6
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omy03000
]
110494340
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
omy04147
]
110494340
Transcription factors [BR:
omy03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
110494340
Exosome [BR:
omy04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
110494340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
ERbeta_N
Motif
Other DBs
NCBI-GeneID:
110494340
NCBI-ProteinID:
XP_021424980
Ensembl:
ENSOMYG00000016680
LinkDB
All DBs
Position
17:63232397..63238751
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AA seq
498 aa
AA seq
DB search
MSFYGYGFWIESMAVTPRRVRLKPWLVAQVDSGLYPGLVWIDRDNKRFRVPWKHATRHTP
QHEEENTIFKAWAVETGKFQEGIDDPDPAKWKAQLRCALNKSREFNLVYDGTKEVPMNPL
KIYDVCDIPQPLSNPGSSDSGSWTPNDCDEDEPDTPEPLPPYPTSNGTSPTLMWSPPGSV
SPLHPPSCPPSVEVWPKEEVKPWPKEEPLDVEMQPSPEEMAPPPPLDMPSPPMPDMMFAS
PEMWISSLPMTDLEVQFQYRGKEVCPAMTVSNPQGCRLFYGDLGPMVNQEELFGPISLEQ
LRFPSTEHIANDKQRVFTNRLLDVMDRGLILEVSGHDIYAVRLCQCKVYWSGPCAPNPNA
PNLIERQRKVKLFCLESFLSGVIAHQRGQSASLPQFDINLCFGEEWPDSRPRERKLIMVQ
IIPVVARMITEMFSGDCMRSFDSGSVRLQISIPDIKDNIVTHLKQLYRLLQTHQGQEGWP
QALPLGAGMSLPQALHAQ
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgtcattttatggttatggtttttggattgaaagcatggcggtgaccccacggcgtgtt
cggctcaagccctggctagtggcccaggtggacagtgggctctacccaggtctggtgtgg
atcgatcgagacaacaagcgcttcagggtcccctggaaacacgctacgcgccacaccccc
cagcatgaggaagagaacacaatctttaaggcctgggcagtggagacaggaaagttccag
gagggtattgatgaccctgaccctgccaagtggaaagcccagctccgctgtgccctcaac
aagagcagagagttcaaccttgtctacgatggcaccaaagaagtccccatgaaccccctg
aagatctacgatgtctgtgacatcccacagcccctcagtaacccaggatcctcagactct
gggtcctggacgccaaatgactgtgatgaagatgaaccagatactccagagccccttcct
ccttatccaacatccaatggcaccagccccactctaatgtggtctcctccggggtcagta
tcacccctccacccccccagctgccccccatcagttgaagtgtggcccaaagaggaggtt
aagccgtggccaaaagaggagcctttggatgtggagatgcagccctcccctgaggagatg
gcgccccctcctccacttgacatgccttcccctcccatgcctgacatgatgttcgcctcc
ccagagatgtggatcagctccttgcccatgacagacctggaggtgcagttccagtaccgg
ggtaaggaggtgtgtccagccatgacagtcagtaatccccagggctgcaggctgttttac
ggggacctgggccccatggtcaaccaggaagagctgtttggccctatcagcctggagcag
ctgaggttcccctctaccgagcacatcgccaacgacaagcagagggtcttcaccaaccgc
ctgctggacgtcatggaccgaggcctcatcctggaggtcagtggccatgacatctatgcc
gtccgcctttgccagtgcaaggtgtactggtcaggcccctgtgcacccaaccccaatgca
cccaacctcatagagaggcagaggaaggttaagctgttctgtctggagtcgtttctcagc
ggtgtaatagcccatcagaggggccagtcggccagccttcctcagttcgacatcaacctg
tgctttggagaggagtggcctgacagcagacccagggagaggaagctcatcatggtgcag
atcatccctgtggtagcacgtatgatcactgaaatgttctcaggtgactgcatgcgctcc
ttcgacagcggcagcgtgcgcctgcagatctccatcccggacatcaaggacaacatcgtt
acccacctgaagcagctgtaccgcctgctgcagacccaccagggccaggagggctggcct
caggctctgcccctgggggctggtatgagcctgccccaggccctgcacgcccagtga
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