Oncorhynchus mykiss (rainbow trout): 110494378
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Entry
110494378 CDS
T07259
Symbol
ap5b1
Name
(RefSeq) AP-5 complex subunit beta-1 isoform X1
KO
K19022
AP-5 complex subunit beta-1
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
omy03400
]
110494378 (ap5b1)
DNA repair and recombination proteins [BR:
omy03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
110494378 (ap5b1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP5B1_middle
AP5B1_barrel
AP5B1_C
AP5B1_N
DUF190
Motif
Other DBs
NCBI-GeneID:
110494378
NCBI-ProteinID:
XP_036806327
Ensembl:
ENSOMYG00000009262
UniProt:
A0A8C7P8U6
LinkDB
All DBs
Position
17:64177667..64198472
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AA seq
964 aa
AA seq
DB search
MSANWPERISAFLRSPSQFLCSTTSDIFLAEVLHELRDDRASDHIKVLLLSPLLEHPTLL
CPSVFVGEETALELMSVFAQCSPKSLPLRCHLLLALTSVLLCSCCVSSHTSASQDFLDLL
LQMAQDTNDAQAGAALHPLRTTACDCLRELEACLPGLLSQRLELLSSLRQQENSRLHQAY
TGLHALALRNAVYLLTQQKEAGAGDLKAALGSNEGFVWGEGADSAHPNSESHSDLALFSP
LTLGTMGKVPSLQTGLDCKELRSLLSSLLEESYLLTSLSQAALLRQLVEVLAMVPAVSPT
ILRAQLLRLLGTCKVCLLHTTLLMKAAFTDSLFNAEDEAFLLKRLVGLSQHPLLSTPEKL
FYIDCILHFPENRPISSGDESLPVLLTPRLAAALVPTVFNDSVSMLARLNLLSLVYLEEG
EEDREGQGGRGLAYLYDHLTSLLRIVENQASREMVVTFFRASFLFLLHFCHVERYSEDLS
QRLCDLYLRRTRLAPHLINLADRTQDRLEESGWAVALLRALQRTITEAPLSQLTLQDLRW
HLRILARVAEEGEVLQRATLNFLLCVITSSSSALCVSGDWRLGNSVLGVCRRLLLHPSLD
SLLTPLADLLQHLTCHYGETDIQDHARLYYTLLTTLSQEKLAGVLAQRGTERGRQAKVRS
LSAIMGENEELTSGLTVHQTERPLLRLVKLDKHEPDECRPEHKPDSEPACETESSPGQGG
IEDYRAQFQSSSFASEITLQYHLTHTGVHDPHFDKLFSIRLHFDLTDGHYEEVSDISVPC
LFRTRKPPTVRLRLKPKQPYHTTLRASAIFTTEDGLSWHSPLADLHVAFPEVFLPLLTPL
GWAREKKQRVFEGIWGEICSGQSEGDLTNTATSLFCDQLEDSAVGELVEKYFQRYLVSDL
DKGRCNVLFFLPPQSHVLLKVITEEDAVQVHIATDNWKLLPYINSYLEDITKEIHSTQQV
NGDV
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcgaactggcccgagaggatctccgcattcttgcgcagcccgtcccagttcttg
tgcagcacgacatcggacatcttcctcgcagaggtcctgcacgagctgcgagatgacagg
gccagtgaccacatcaaggtcctgctgttgtccccactacttgagcaccctactctgctg
tgcccctctgtctttgtgggcgaggagaccgccctggagctcatgtctgtgtttgcccag
tgctcccccaaatccctcccgctccgctgccaccttctcctggccctcacctctgtgctc
ctctgctcctgctgtgttagctcacacaccagcgcctcccaagacttcctggaccttctc
ttacagatggcccaggacaccaacgacgcacaggctggggctgcattacacccattgagg
acaacagcctgcgactgccttagggagctagaggcttgcctcccgggcctactatcccaa
cgcttggagctcctgagcagcctgaggcagcaggaaaactccaggcttcaccaggcctac
acggggctccatgccctggcactgaggaatgctgtgtatctgctcacccagcagaaagag
gctggggctggagacctgaaggctgcactggggagcaatgaggggtttgtgtggggggag
ggtgcagactccgcacacccgaactctgagtcacactcagacttggccctcttctcgccc
ctcactctgggcaccatgggaaaagttccttccctgcagacgggcctagactgtaaagag
ctgagatcgctactctcctccctcttagaggagtcctacctgctcacatccctatcccag
gctgccctgctgcgacagctggtggaggtgcttgccatggtgcccgcagtctccccaacg
atactcagggcacagttgctgcgtctattgggcacctgcaaggtgtgtcttcttcatacc
actctgctgatgaaggctgctttcacagacagcctgttcaacgcagaggatgaagccttc
cttctaaagcgtctcgtcggcctgtcccaacaccccctactgagcacgcctgagaagctc
ttctacattgactgcatcctgcacttcccagagaaccgacctatcagcagtggcgacgag
agcctgcccgtgctcttgacccctcggctggccgcagccctagtgcccactgtgttcaat
gatagtgtcagcatgctggctagactgaacctactctcgctggtctacctggaggaagga
gaagaagacagggagggacagggggggagaggcctggcctacctgtacgatcacctaacc
tcccttctccgtatcgtggagaaccaggccagtagggagatggtggtgaccttcttcagg
gcttccttcctcttcctccttcacttctgccacgtggagcgctactctgaggacctgtct
cagaggctgtgtgacctgtacctcagacgcactcggctggcccctcacctcatcaaccta
gctgaccggacccaggaccggctggaggagtcaggctgggctgtggcactgcttagagcc
ctgcaaagaaccatcacagaggccccactgtcccagctcaccttgcaagacctccgctgg
cacctcaggatcctggcccgtgtggcagaggaaggggaagtcctccagagggccactctc
aactttctgctgtgcgtcatcacttcctcttcatccgcgctgtgtgtgagcggggactgg
cgtctggggaacagcgtgctgggggtgtgtcgacgcctgctcctgcaccccagcttagac
tcccttctcacaccgctggctgatctcctacagcacctcacctgccattatggtgaaaca
gacatccaggaccacgcccgcttgtactacaccctcctcaccactctttcccaggagaag
ctggctggggtgttagcacagaggggaacagaaagggggcggcaggccaaagtgcgctcg
ctgtctgccatcatgggcgagaacgaggaactgaccagcggtctgaccgtgcaccagaca
gagcgaccgctgctgaggctggtcaaactggacaaacatgaaccagatgaatgcagacca
gagcataaaccagacagtgaaccagcctgtgagactgagagttccccaggacagggtggg
atagaggactacagagcccagttccagagttccagcttcgcctctgaaatcaccctccaa
taccacctcacacacactggagttcacgacccccatttcgacaagctcttcagcatccgc
ttgcactttgatctcacagacggccactatgaggaagtgagtgacatcagcgtgccttgc
ctgttcaggaccaggaagccccctacagtgaggctgaggctgaagcccaagcagccgtac
cacaccaccctgagagctagcgccatcttcaccacggaggacggcctctcctggcactcc
ccgctggcagacctacatgtggccttccctgaggtgtttctgcccctcctcacaccccta
gggtgggccagggaaaagaagcagagggtgtttgaggggatctggggtgaaatatgctca
gggcagtctgagggggatttgaccaacactgcaactagcctgttctgtgatcagttggag
gattcggctgtgggtgagctggtggagaagtactttcagagatatctggtctcagacttg
gataaaggcaggtgtaatgtgctcttcttcctcccaccccagtctcacgtgctgctgaag
gttatcacagaggaggatgccgtccaggttcatattgctacagacaactggaagcttctg
ccttatattaactcttatctagaggacattaccaaagagattcacagcacacagcaagtc
aatggtgatgtctga
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integrated database retrieval system
