Oncorhynchus mykiss (rainbow trout): 110494472
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Entry
110494472 CDS
T07259
Name
(RefSeq) U3 small nucleolar RNA-associated protein 4 homolog
KO
K14548
U3 small nucleolar RNA-associated protein 4
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
110494472
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
omy03009
]
110494472
Ribosome biogenesis [BR:
omy03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
110494472
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
WD40
WD40_Prp19
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_NUP159_NUP214
EIF3I
Beta-prop_HPS5
Beta-prop_TEP1_2nd
Beta-prop_Vps41
Beta-prop_SCAP
RMC1_N
Beta-prop_WDR75_1st
DUF7165
Beta-prop_IFT140_1st
Lactonase
PROPPIN
Beta-prop_DCAF12
CPSF_A
Motif
Other DBs
NCBI-GeneID:
110494472
NCBI-ProteinID:
XP_021425242
Ensembl:
ENSOMYG00000014661
LinkDB
All DBs
Position
2:67232278..67239902
Genome browser
AA seq
686 aa
AA seq
DB search
MGEFKVHRVRFFDYMPTAIRAMAFNAHTERLALARMDGSVEIFNFTDHYFQEKVIPGKDS
RSTESLCWVGGRLFSAGLNGEITEYDLENLRPKYSLEAYGGPIWTIISNTQGTQLAIGCE
DGTVKLFEVLEEHIQFERNLDRQKGRIISLSWHPSGTHIAAGMMDMIRVFDVPTGHAVQR
LLVDRGFGGSKSQETVVWSVAFLSDHTVVSGDSAGKVQVWDGHTGTLVKTHLVTKWDVLA
LSVSKDESSVVAGTSEGTVIQFQFIAPTLHQQQDKEWVRTRTFKNHTHDVRALAEIETAI
VSGGMDTHLVVRPLLEKFDEKSHASGLRKIHFPHRNLVSCAKKAGLLLFQFPGQLELWRL
GDSDGHGKPGDRLPLKRKPEKLLLLKRKGEDHICCSALSSCGGWLAYSTVSCVRIYRLQT
DNNNISITKVSKLPKALRSAHQLCFSSDSSKMFAASSQSSVLVIALTQSECKYVHTLKPK
SGSRQPIHLMTTSVDGKWLAAANSDCEIRVYNLQKLKLHCIVPVYGSCPSAMGIHPTTNN
MTVVHADQQLFEYSIVEKQYTDWSRKLQKQGLHNVWLDRDTPVTHVTFNPKNPNQVVLHD
MHMFCIIDQSLPLPDQKTQFYNQMTLRSLSEQERPSHLHAFKICKTFQDLLCVSLLDDQS
LVVVERPLLAITSQLPAPVRQKKFAT
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgggggagttcaaagtgcaccgggttcggtttttcgactacatgcccacagcgatcaga
gccatggcattcaatgcccacacagagagactagcccttgcacgaatggatgggagtgtc
gagattttcaacttcactgaccactatttccaggaaaaagttatcccagggaaagactcc
cgatccactgagtctctgtgttgggttggaggacgccttttcagtgctggcctgaatgga
gagatcacagaatatgacctggaaaacctaagacccaagtactccctggaggcatatggg
ggccccatttggaccataatcagcaatactcaagggacacaattagcgattggatgtgaa
gatgggacagtgaagttgtttgaagtacttgaagagcacatacagtttgagcgcaatctg
gacagacagaaaggtcgcatcatatccctctcctggcacccctctggcacacacatcgct
gctggcatgatggacatgatccgtgtctttgatgttccaactggtcatgctgtacagagg
ctcctggtggaccggggctttggaggctctaagagtcaggagacagtagtctggagcgtg
gccttcctgtcagaccatactgttgtaagcggggactctgctgggaaggtccaagtctgg
gacggacacaccggcactcttgtcaaaacacacctggtgaccaagtgggatgtgctggca
ctgtctgtctctaaggacgagagcagtgtggtggcagggacgtcagaaggcactgtgatc
cagttccagttcattgctcctactctgcatcagcagcaggacaaggagtgggtcagaacc
aggaccttcaagaaccacacgcatgatgtcagagccctggctgagatcgagactgccatc
gtctctggaggcatggatacccaccttgtagtgagacccctcttggagaagtttgatgag
aagtcacacgcttcaggacttcggaagatccactttccccatcggaatctagtatcctgt
gcgaagaaggcaggactactgctcttccagttccctggtcagctggagctgtggagactg
ggagatagtgatggacatgggaagccaggagaccgcttgcctctgaagaggaagccggag
aaactcctccttctgaagagaaagggtgaagatcatatctgctgcagtgccctgtcctcc
tgtggaggatggctagcttattccaccgtgtcctgcgtgcgtatctacaggctgcagacg
gacaataataacatcagtattaccaaggtatccaaactcccaaaggctctacgctctgca
caccagctctgcttctcctcggactcctccaagatgtttgctgcctccagccaatcatca
gtcctcgttattgctcttacccagtctgagtgcaagtatgtgcacaccctcaagcccaag
tcagggtccaggcagcccattcacctaatgactaccagtgtagatgggaagtggctggcg
gccgcaaatagtgactgtgagatccgcgtctacaatctacagaaactaaagctccattgt
atagtacctgtttatggttcctgtcccagtgccatggggatccaccccaccaccaacaac
atgacagtggtgcacgctgaccaacagttatttgagtactctatagtggagaagcagtac
acagactggagccgaaagctgcagaagcaggggctccacaacgtgtggttggaccgggac
acacctgtcacccatgtgaccttcaacccgaaaaacccaaatcaagttgtcctgcacgac
atgcacatgttctgcataatcgaccaaagtctgcccctccctgaccagaagacccagttt
tacaatcagatgaccctcaggagcctatcagagcaggagaggcccagtcacctccatgcg
ttcaaaatatgcaaaaccttccaggacctgctgtgtgtgagcctgttggatgaccagtct
ctggtggtggtggagcgccctctcctggccatcacatctcagctgcctgctccagtccga
cagaaaaagtttgcaacataa
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