Oncorhynchus mykiss (rainbow trout): 110494541
Help
Entry
110494541 CDS
T07259
Name
(RefSeq) cadherin-4 isoform X1
KO
K06797
cadherin 4, type 1, R-cadherin
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
110494541
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
omy04515
]
110494541
Cell adhesion molecules [BR:
omy04515
]
Cadherins
Major cadherins
110494541
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_pro
Cadherin_4
Fibulin_C
DUF4064
Stevor
DUF6479
DUF5385
Motif
Other DBs
NCBI-GeneID:
110494541
NCBI-ProteinID:
XP_036806494
Ensembl:
ENSOMYG00000044618
LinkDB
All DBs
Position
17:complement(73473726..73824081)
Genome browser
AA seq
929 aa
AA seq
DB search
MHFVSVVILTCTLLVETSWGTKAGQPPKPPCRPGFSESFYTVFVSRDLLRGQSILKDTSL
SSERVKFEDCKHSKAVGFESSDPNFSVRPDGSVYAEQEVANLSEPIQFMVTARGGHDPHI
WETTVKLALFGHQPSVPVSQIGVEDMIARAWDSNPRVIKFPRKHQKSSSANGLRRQKRDW
VIPPINVPENSRGPFPQMLVRIRSDQDLEKGIRYSITGAGADQPPIDVYNIDPVHGKMFV
TRPLDREERASYHLRAHAVDMNGNKVESPIDLYIYVIDMNDNRPEFQNQVYNGSVAEGSK
PGTLVMQVTANDSDDDTTANGMVRYRILSQTPHMPIPNMFTINSETGDIFTMAAGLDREK
VSQYIIIVQATDMEGNLNFGLSNTATALISVTDINDNPPELTARTFSGEVPENSVNVVVA
NLTVIDRDQPHSPNWAAQYRIASGDPQGHFLIRTNPINNDGMVTVVKPVDYEQNRAFMLT
VIVSNKAPLASGIQSSLQSSAGVTISVQDVNESPVFPTNPKSIRFEEGVPAGTTLTVFAA
QDPDLFIQQTVRYSKLSDPANWLRINRTNGQITTMAVLDRESMYVRNNIYEATFLAADNG
KSGSPPASGTGTLQIHLIDVNDNAPVMMPKEAQLCERANPRSKVNITASDADADPHVGPF
VFELPSYPPSIRRNWTISRISGDYAQLRLRIPYLDAEVYDVPIIVSDSGNPPLSNRSIIK
VKVCPCDDNGDCTTTGAVAAAGLGTGAIIAILICIIILLILVLVFVMWMKRREKERQAKP
LLIDPEDDVRDNILKYDEEGGGEEDQDYDLSQLQQPESVEHIISKPVGVRRVDERPIIAE
SQYPVRPSLPHPGDIGDFINDGLRAADNDPTAPPYDSLLVFDYEGSGSTAGSVSSLNSSS
SGDQDYDYLNDWGPRFKKLADLYGGGEDN
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atgcattttgtatcggttgttatactgacgtgcaccttacttgtggaaacatcttggggg
accaaggcaggccaacctcctaaacccccatgcagaccaggcttctctgagagcttctac
actgtgtttgtctcgagggatctactgcgaggccagagcattctcaaagacaccagccta
tcgagtgaacgtgtaaagtttgaggactgcaagcacagtaaagcagtgggcttcgagagc
agtgaccctaacttcagtgtgcgccctgacggctcggtgtacgcggagcaggaagtggcc
aacctgtcagaaccgatccagttcatggtgaccgcccgcggaggtcatgaccctcacatc
tgggagaccacggtcaagctggccttgtttggacaccagccctctgtccctgtgagtcag
attggagtggaggatatgattgcaagggcctgggactctaatcccagggttatcaagttt
ccacggaaacatcaaaaaagctcctctgccaatggactgagacgacagaagcgagactgg
gtcatcccaccaatcaatgtgcctgaaaactccagaggacccttcccacaaatgcttgtc
agaatccgctcggaccaggacctggagaaagggatacgctacagcatcactggagcaggg
gcggaccagcctcccattgacgtgtacaacatcgaccctgtgcacggcaagatgtttgtc
accagacccctggacagagaggagagggcctcctaccatctgcgggcccatgctgtggac
atgaatgggaacaaggtggaaagccccatagatctatacatctacgtcatcgacatgaat
gacaaccggccagagttccagaaccaggtctacaatggctctgtggctgaaggctcaaag
ccaggcacgttggtgatgcaagtgacagccaacgactcagatgatgacaccacagccaat
gggatggtgcgctaccggatcctgtcccagaccccccacatgcccatccccaacatgttc
accatcaacagtgagacgggagacatcttcaccatggctgccggcctggacagggagaaa
gtgtcccagtacatcatcatcgtccaggccacggacatggaggggaacctgaactttggc
ctgtccaacacggccaccgccctcatctctgtgaccgacatcaacgacaatcctcccgag
ctgaccgccaggacgttttcgggggaggtcccagagaacagtgtgaatgtggtggtggcc
aacctgacagtgattgacagggatcagccccacagccctaactgggctgcccagtaccgc
atcgccagcggagacccccagggtcacttcctcatccgcaccaaccctatcaacaacgac
ggcatggtcactgtggtcaagccggtggactatgagcagaacagggccttcatgctgact
gtgatagtctctaacaaggcccccctggccagtgggatccagtcttctctccagtcttca
gcgggggtcaccatctccgtacaggacgtcaacgaatcccctgtcttccccaccaacccc
aagtccatccgttttgaggagggtgtccccgcaggcaccacactcaccgtgtttgctgcc
caagaccctgacctcttcatccagcaaactgtcaggtactccaagctgtctgaccccgct
aactggctgaggatcaacaggaccaatggtcagatcaccaccatggctgtgctggacagg
gagtctatgtacgtcaggaacaacatctatgaggccaccttcctggctgccgacaatggt
aagtctggttctcccccggccagtggaacaggtactctgcagatccatctgatagatgtg
aatgacaatgctccggtgatgatgcccaaggaggcccagttgtgtgaacgcgccaatccc
cgctccaaggtcaacatcacagcctccgatgccgacgctgacccccatgtggggcccttt
gtgtttgagctgccctcctacccccccagcatccgacgcaactggaccatctccaggatc
agcggtgactatgcccagttgagactgaggattccctacctggatgcagaggtgtatgat
gttcccatcatcgtgtcggactccggtaacccgcccctctctaacaggtccattataaag
gtcaaggtgtgtccgtgtgatgacaacggagactgtactaccaccggagctgtggctgct
gccggactggggaccggagccatcatagccatactcatctgtatcatcatactgcttatc
ctggtgctagtgtttgtgatgtggatgaagcgcagggagaaggagcgtcaggccaagccc
ctgctgatcgacccagaggacgacgtcagagacaacattctgaagtacgacgaggaggga
ggaggagaggaggaccaggactatgacttgagccagctgcagcagcctgagtctgtggag
cacataatcagtaaaccagtgggggtgcgcagggtggacgagaggcccatcatcgctgag
tcccagtaccctgtcagacccagcctgccccaccctggagacatcggagacttcataaac
gacggtctgagggcggcggacaacgaccctacggccccgccctatgactccctgctggtg
tttgactatgagggcagtggctccacggccggctctgtcagctccctcaactcctctagc
tcaggagaccaggactacgactacctcaacgactggggcccccgcttcaaaaagctggca
gacctctacggcgggggagaggacaactga
DBGET
integrated database retrieval system