KEGG   Oncorhynchus mykiss (rainbow trout): 110494541
Entry
110494541         CDS       T07259                                 
Name
(RefSeq) cadherin-4 isoform X1
  KO
K06797  cadherin 4, type 1, R-cadherin
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Pathway
omy04514  Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:omy00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    110494541
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:omy04515]
    110494541
Cell adhesion molecules [BR:omy04515]
 Cadherins
  Major cadherins
   110494541
SSDB
Motif
Pfam: Cadherin CADH_Y-type_LIR Cadherin_pro Cadherin_4 Fibulin_C DUF4064 Stevor DUF6479 DUF5385
Other DBs
NCBI-GeneID: 110494541
NCBI-ProteinID: XP_036806494
Ensembl: ENSOMYG00000044618
LinkDB
Position
17:complement(73473726..73824081)
AA seq 929 aa
MHFVSVVILTCTLLVETSWGTKAGQPPKPPCRPGFSESFYTVFVSRDLLRGQSILKDTSL
SSERVKFEDCKHSKAVGFESSDPNFSVRPDGSVYAEQEVANLSEPIQFMVTARGGHDPHI
WETTVKLALFGHQPSVPVSQIGVEDMIARAWDSNPRVIKFPRKHQKSSSANGLRRQKRDW
VIPPINVPENSRGPFPQMLVRIRSDQDLEKGIRYSITGAGADQPPIDVYNIDPVHGKMFV
TRPLDREERASYHLRAHAVDMNGNKVESPIDLYIYVIDMNDNRPEFQNQVYNGSVAEGSK
PGTLVMQVTANDSDDDTTANGMVRYRILSQTPHMPIPNMFTINSETGDIFTMAAGLDREK
VSQYIIIVQATDMEGNLNFGLSNTATALISVTDINDNPPELTARTFSGEVPENSVNVVVA
NLTVIDRDQPHSPNWAAQYRIASGDPQGHFLIRTNPINNDGMVTVVKPVDYEQNRAFMLT
VIVSNKAPLASGIQSSLQSSAGVTISVQDVNESPVFPTNPKSIRFEEGVPAGTTLTVFAA
QDPDLFIQQTVRYSKLSDPANWLRINRTNGQITTMAVLDRESMYVRNNIYEATFLAADNG
KSGSPPASGTGTLQIHLIDVNDNAPVMMPKEAQLCERANPRSKVNITASDADADPHVGPF
VFELPSYPPSIRRNWTISRISGDYAQLRLRIPYLDAEVYDVPIIVSDSGNPPLSNRSIIK
VKVCPCDDNGDCTTTGAVAAAGLGTGAIIAILICIIILLILVLVFVMWMKRREKERQAKP
LLIDPEDDVRDNILKYDEEGGGEEDQDYDLSQLQQPESVEHIISKPVGVRRVDERPIIAE
SQYPVRPSLPHPGDIGDFINDGLRAADNDPTAPPYDSLLVFDYEGSGSTAGSVSSLNSSS
SGDQDYDYLNDWGPRFKKLADLYGGGEDN
NT seq 2790 nt   +upstreamnt  +downstreamnt
atgcattttgtatcggttgttatactgacgtgcaccttacttgtggaaacatcttggggg
accaaggcaggccaacctcctaaacccccatgcagaccaggcttctctgagagcttctac
actgtgtttgtctcgagggatctactgcgaggccagagcattctcaaagacaccagccta
tcgagtgaacgtgtaaagtttgaggactgcaagcacagtaaagcagtgggcttcgagagc
agtgaccctaacttcagtgtgcgccctgacggctcggtgtacgcggagcaggaagtggcc
aacctgtcagaaccgatccagttcatggtgaccgcccgcggaggtcatgaccctcacatc
tgggagaccacggtcaagctggccttgtttggacaccagccctctgtccctgtgagtcag
attggagtggaggatatgattgcaagggcctgggactctaatcccagggttatcaagttt
ccacggaaacatcaaaaaagctcctctgccaatggactgagacgacagaagcgagactgg
gtcatcccaccaatcaatgtgcctgaaaactccagaggacccttcccacaaatgcttgtc
agaatccgctcggaccaggacctggagaaagggatacgctacagcatcactggagcaggg
gcggaccagcctcccattgacgtgtacaacatcgaccctgtgcacggcaagatgtttgtc
accagacccctggacagagaggagagggcctcctaccatctgcgggcccatgctgtggac
atgaatgggaacaaggtggaaagccccatagatctatacatctacgtcatcgacatgaat
gacaaccggccagagttccagaaccaggtctacaatggctctgtggctgaaggctcaaag
ccaggcacgttggtgatgcaagtgacagccaacgactcagatgatgacaccacagccaat
gggatggtgcgctaccggatcctgtcccagaccccccacatgcccatccccaacatgttc
accatcaacagtgagacgggagacatcttcaccatggctgccggcctggacagggagaaa
gtgtcccagtacatcatcatcgtccaggccacggacatggaggggaacctgaactttggc
ctgtccaacacggccaccgccctcatctctgtgaccgacatcaacgacaatcctcccgag
ctgaccgccaggacgttttcgggggaggtcccagagaacagtgtgaatgtggtggtggcc
aacctgacagtgattgacagggatcagccccacagccctaactgggctgcccagtaccgc
atcgccagcggagacccccagggtcacttcctcatccgcaccaaccctatcaacaacgac
ggcatggtcactgtggtcaagccggtggactatgagcagaacagggccttcatgctgact
gtgatagtctctaacaaggcccccctggccagtgggatccagtcttctctccagtcttca
gcgggggtcaccatctccgtacaggacgtcaacgaatcccctgtcttccccaccaacccc
aagtccatccgttttgaggagggtgtccccgcaggcaccacactcaccgtgtttgctgcc
caagaccctgacctcttcatccagcaaactgtcaggtactccaagctgtctgaccccgct
aactggctgaggatcaacaggaccaatggtcagatcaccaccatggctgtgctggacagg
gagtctatgtacgtcaggaacaacatctatgaggccaccttcctggctgccgacaatggt
aagtctggttctcccccggccagtggaacaggtactctgcagatccatctgatagatgtg
aatgacaatgctccggtgatgatgcccaaggaggcccagttgtgtgaacgcgccaatccc
cgctccaaggtcaacatcacagcctccgatgccgacgctgacccccatgtggggcccttt
gtgtttgagctgccctcctacccccccagcatccgacgcaactggaccatctccaggatc
agcggtgactatgcccagttgagactgaggattccctacctggatgcagaggtgtatgat
gttcccatcatcgtgtcggactccggtaacccgcccctctctaacaggtccattataaag
gtcaaggtgtgtccgtgtgatgacaacggagactgtactaccaccggagctgtggctgct
gccggactggggaccggagccatcatagccatactcatctgtatcatcatactgcttatc
ctggtgctagtgtttgtgatgtggatgaagcgcagggagaaggagcgtcaggccaagccc
ctgctgatcgacccagaggacgacgtcagagacaacattctgaagtacgacgaggaggga
ggaggagaggaggaccaggactatgacttgagccagctgcagcagcctgagtctgtggag
cacataatcagtaaaccagtgggggtgcgcagggtggacgagaggcccatcatcgctgag
tcccagtaccctgtcagacccagcctgccccaccctggagacatcggagacttcataaac
gacggtctgagggcggcggacaacgaccctacggccccgccctatgactccctgctggtg
tttgactatgagggcagtggctccacggccggctctgtcagctccctcaactcctctagc
tcaggagaccaggactacgactacctcaacgactggggcccccgcttcaaaaagctggca
gacctctacggcgggggagaggacaactga

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