Oncorhynchus mykiss (rainbow trout): 110494584
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Entry
110494584 CDS
T07259
Name
(RefSeq) LOW QUALITY PROTEIN: class E basic helix-loop-helix protein 40-like
KO
K03729
class B basic helix-loop-helix protein 2
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omy03000
]
110494584
Transcription factors [BR:
omy03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
110494584
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GFIT
Motif
Pfam:
HLH
Hairy_orange
bHLH_NPAS4
YabA
Oscp1
DUF6809
Motif
Other DBs
NCBI-GeneID:
110494584
NCBI-ProteinID:
XP_036806572
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Position
17:complement(75517732..75521544)
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AA seq
405 aa
AA seq
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MERITSAQPPPCMAKHQSQEMADMQGKDFPKYVCKHRKGMKRVEDSKETYKLPHRLIEKK
RRDRINECIAQLKDLLPEHLKLTTLGHLEKAVVLELTLKHVKALSTLLEQQQQKIIAFQI
RDQSSVSSENSEEMFHSGFHVCAKEVLQYLANQGSSRDPLTSSEMISHLHKVASEVLQGP
FSPQSEEPTHKPIDSMEKPTGQMPKGKEGHPKNFVSVIQRTYPHGHGEQSGNDTDTDSGY
GGEHEKRDLKAQRSSYYSKEGELKYALAERMAGGGVKQEGAEPQAKRLKSDYSEDESSSG
QVVSSHHSYMSFSQHQTPLCVPFYLIPQAAASWPMMEKCWFPGGMPFLYPGMNVSAASLS
PEKIPKNLVMSPRAGSPTLYQAPMDSPALLQALKQXPPMNLESKD
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atggagaggattacaagtgcgcaacctcctccttgtatggcaaaacaccagtcgcaggag
atggcagacatgcaaggaaaagatttcccaaagtacgtgtgcaaacaccgaaagggaatg
aagcgcgtggaagacagtaaggagacatacaagttaccccaccgattgattgagaagaaa
agacgtgacagaatcaatgaatgcattgcccaactgaaggatttattgccagaacatctc
aaactcacaactctaggccatttggagaaagctgtggtgttggaactcaccctgaagcat
gtgaaagccctgagcactctcctggaacagcagcagcagaaaatcattgcatttcaaatc
agggatcagagcagtgttagctcagagaacagtgaggagatgttccactctggcttccat
gtctgtgctaaggaggtcctccagtacctggctaaccaggggagcagcagagaccccctg
acctcctctgaaatgatcagccacctccacaaagtagcatcagaggtgctccagggtcca
ttcagcccccagtccgaagaacccacccacaaacccatcgatagcatggagaagcctact
ggtcagatgcctaagggcaaggagggtcaccccaagaactttgtgtctgtcattcaaagg
acatacccccacggacatggagagcagagtggcaatgacacagacactgacagcggctat
ggaggggaacacgagaaacgggacctcaaagcccaacgctcaagctactacagcaaggag
ggggagctcaaatatgctctggctgagaggatggcaggaggtggcgtcaagcaggagggt
gctgagccccaggccaagaggttaaaatctgactactcagaggacgagtcttcctctggg
caggtggttagcagccatcacagctacatgagcttctcccaacaccagacccccctctgc
gtgcccttctacctcatcccccaagcagctgcatcgtggcccatgatggagaagtgctgg
ttcccagggggcatgccctttttgtacccgggcatgaatgtctcagcagccagcttgtct
ccagagaaaatacctaaaaacttagtaatgtctcccagggcaggttccccgacactctac
caagcacccatggactcaccagccctccttcaagctttaaaacaangcccccccatgaac
ttggaatccaaagactga
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