Oncorhynchus mykiss (rainbow trout): 110494604
Help
Entry
110494604 CDS
T07259
Symbol
siah1
Name
(RefSeq) E3 ubiquitin-protein ligase Siah1 isoform X2
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04115
p53 signaling pathway
omy04120
Ubiquitin mediated proteolysis
omy04137
Mitophagy - animal
omy04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
110494604 (siah1)
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
110494604 (siah1)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
110494604 (siah1)
09143 Cell growth and death
04115 p53 signaling pathway
110494604 (siah1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
omy04121
]
110494604 (siah1)
Enzymes [BR:
omy01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110494604 (siah1)
Ubiquitin system [BR:
omy04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
110494604 (siah1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
Trm112p
Motif
Other DBs
NCBI-GeneID:
110494604
NCBI-ProteinID:
XP_021425509
Ensembl:
ENSOMYG00000017326
LinkDB
All DBs
Position
2:68920701..68947106
Genome browser
AA seq
286 aa
AA seq
DB search
MDEEMSRQTATALPTGTSKCAPSQRVPTLSGTTASNSDLASLFECPVCFDYVLPPILQCQ
SGHLVCSNCRPKLTCCPTCRGPLGSIRNLAMEKVANSVLFPCKYASSGCEVTLPHTDKAE
HEELCEFRPYSCPCPGASCKWQGSLDAVMPHLMHQHKSITTLQGEDIVFLATDINLPGAV
DWVMMQSCFGFHFMLVLEKQEKYDGHQQFFAIVQLIGTRKQAENFAYRLELNGHRRRLTW
EATPRSIHEGIATAIMNSDCLVFDTSIAQLFAENGNLGINVTISMC
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atggacgaagaaatgagtcgccagaccgccacagcgctgcccacaggaacctccaagtgc
gccccctcccagcgcgtccccaccttgtccggcactacggcctctaacagcgacctggcc
agcctgtttgagtgccctgtctgcttcgactatgtgctgccccccatcctgcagtgccag
agcggccacctggtctgcagcaactgccggcccaagctcacttgctgccccacctgccgg
ggcccgctgggctccatcaggaacctggccatggagaaggtggccaactctgtgctgttc
ccctgcaagtatgcgtcgtcgggctgtgaggtgacgctgccccacacagacaaggcagag
cacgaggagctgtgtgagttccggccatactcctgcccctgcccaggggcctcgtgtaag
tggcagggctcgttggacgcggtcatgccccacctcatgcaccagcacaaatccatcacc
acgctgcagggcgaggacatcgtgttccttgccacggacattaacctgcctggggcagtg
gactgggtcatgatgcaatcctgcttcggattccacttcatgctggtcctggagaagcag
gagaagtacgacggtcaccagcagttctttgccattgtgcagctgattggcacgcggaag
caggcagaaaactttgcctaccgcctggagctcaacgggcaccggcgacggctcacctgg
gaggccacgccccgctccatccatgagggcatcgccactgccattatgaacagcgactgc
ctagtgtttgacacttccatcgcgcagctgtttgctgagaacggaaacctgggcatcaac
gtcaccatatccatgtgctga
DBGET
integrated database retrieval system
