Oncorhynchus mykiss (rainbow trout): 110494605
Help
Entry
110494605 CDS
T07259
Name
(RefSeq) contactin-3 isoform X1
KO
K06761
contactin 3/4/5/6
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
omy04515
]
110494605
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
omy00537
]
110494605
Cell adhesion molecules [BR:
omy04515
]
Immunoglobulin superfamily
Contactins
110494605
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
omy00537
]
Others
110494605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
fn3
V-set
Ig_DSCAM-DSCAML_C
Ig_5
Ig_C17orf99
C2-set_2
Pur_ac_phosph_N
C2-set_3
Pox_C7_F8A
Motif
Other DBs
NCBI-GeneID:
110494605
NCBI-ProteinID:
XP_021425495
Ensembl:
ENSOMYG00000027186
UniProt:
A0A8C7RX83
LinkDB
All DBs
Position
17:complement(77008239..77087427)
Genome browser
AA seq
1031 aa
AA seq
DB search
MMLLWKRLLLLSIIGCLAAHAQDVLFQGPRWRTEPSDLILPNNSPDQEATITCEAEGKPS
PQYRWSLNGTLIDLGSDYRRHMSGGNLIINSLDRDQDTGIYQCTAFNTWGIILSCRATLQ
FAYLDNFKTQTARSAVNVREGQGVVLLCGPPMHSGELTFAWIFNEYPYFVQQDSRRFISQ
ETGSLYIAKVEPSDVGNYTCVVNNSITKGKVLSSPTPLVLRNDGAMGEYEPKIEVNFPDT
VPAAKGSTVKLECFALGNPVPEISWRRTSGVPFPSKVKMKNSNAVLEIPHFQQEDTGMYE
CVAENSRGKNAARGRIAFQAKPHWLQTMIDGALSIEENLFWECKANGKPKPSYSWLRNGD
NLMAEGRVQIENGALSIAALNLSDAGMYQCVAENKHGIIYSSAELMVLASPPSFSKNPLK
PLLKARSGSEVVLECKPQASPRAISLWKKSNEIVQKNERITLLANGTLKIVNATRRDAGS
YTCIAKNQFGTASATGRLLITEPTRITQRPANMEIIVGESIVLPCQIASDPALDVSFSWE
FNGQLIDFHGDADHFDRVGGSISGDLMIRNIQLNHGGKYVCVIDTDVESLSASAILVVKG
PPGPPDTVAVEEITDSTAQLSWSPGRDNGSPITGYIIQARTPFTVGWQAVDTVPEVINGN
TLTATVVGLNAWVEYEFRVVARNSVGMGEPSPASAKTRTEDTMPDTAPTDVGGGGGTKSE
LVITWEPVPEELQNGEGFGYIIAFRPLGAITWTRVVISTPGVARYIFRNDTIPPFSPFDV
KVGAYNNRGEGPFSSIATVFSAEEVPSEAPKRVWGRSVSAATVEVIWEALPVTPERVLGY
EVVYWEDDTKPDTVGKVRTSGNYSAVNVTGLSANTQYYLAVCAFNTAGTGPQSTHINATT
KKPAPGQPPLNVEWTMIGSLLTLHWGPVIAMETEAEVIGYLVLLRRHRYNDVNSIITNKT
RMELTLSPNDNYLIQIKALSEGGEGVGSEPIHIHKLSMGARGSGASNLNPLSLSHLSAFL
ISALLLLNSSW
NT seq
3096 nt
NT seq
+upstream
nt +downstream
nt
atgatgttactatggaaacgacttctgctgctatcaatcattggttgccttgccgctcat
gcacaagatgtcctgttccaagggccaagatggagaacagagcccagtgacctcattctc
cccaacaactcccctgaccaggaagccaccattacatgtgaggcagaggggaaaccctcc
ccacaatacagatggtcgcttaacggaacactcattgatctggggagtgactaccggcgt
cacatgtctggaggcaacctgatcattaacagtctggacagggaccaagacacagggata
taccagtgcactgccttcaacacatgggggatcatcctcagctgccgagccactctacaa
tttgcatacctagataacttcaagacccaaactgcacggagtgctgtgaatgtccgagag
ggccaaggagtggttttgttatgtggaccacccatgcattctggagagctgacgtttgca
tggatcttcaatgagtacccctactttgtccagcaagatagtcgtcgattcatctcccag
gagacaggaagtctgtacatcgctaaagtggagccttctgatgtgggcaactacacctgt
gtggtcaacaatagcatcactaagggcaaagtcctcagctctcctacaccactggtcctg
aggaatgacggagcaatgggtgaatacgaaccgaaaatagaagttaatttccctgacact
gttccagctgcgaagggatccacggtaaaactagaatgcttcgcactgggaaacccagtc
ccagaaataagttggaggagaaccagcggtgtcccatttcccagtaaggtgaagatgaag
aactccaacgctgttcttgaaattccacatttccagcaggaagacacagggatgtatgag
tgcgtggcagaaaatagccggggaaaaaacgctgcacgaggtcgtatcgccttccaggca
aaaccccattggctgcaaacaatgatcgacggggccctgtccattgaggagaacctgttc
tgggagtgtaaggcaaacggaaaacccaagccctcctacagttggctgaggaatggagac
aacctaatggcagagggccgggtacaaatcgaaaacggggctctctccatagcagcatta
aacctgtcagacgccggaatgtatcagtgtgtggctgaaaacaaacatggcattatttat
tccagcgctgagctaatggtgttagcatcacctcccagtttctccaagaatccactgaag
cccctgctgaaagctcgctcaggcagtgaagtggttctggagtgcaagccccaagcctcg
ccccgggcaattagcctgtggaagaaaagcaatgagatcgtgcagaaaaacgagaggatt
actctgcttgccaacgggacactgaagattgtcaacgcaaccagaagggatgcggggagc
tacacatgcatcgctaaaaatcagtttgggactgcaagcgccaccggaagactccttatc
acagagcccaccagaatcacccagaggcctgctaacatggagatcattgttggcgagagt
atcgtgctgccctgccagatagccagcgatccagccttggatgtgtctttctcctgggaa
ttcaacgggcagctcatagacttccacggggatgccgaccatttcgacagagtaggaggg
agcatttcaggagatctgatgattcgtaacatccagctgaatcacggggggaaatatgtc
tgtgttatcgacaccgacgtagagagcttgtccgcttcggccatcttggttgtgaaaggt
ccccccgggcccccggacacagtagcagtggaggagatcacagatagcacggcccagctc
tcttggagccccggcagggacaacggcagccctatcaccggctacatcatccaggcccgg
acccccttcactgtgggctggcaggctgtggacacagttcctgaggtgatcaatggcaac
acactgacagccactgtggtgggcctgaacgcctgggtggagtatgagttcagggtggtg
gcccgcaacagtgtgggcatgggagagcccagtccagcctcagccaagaccaggacagag
gataccatgcctgatacagctcccactgatgttggaggcggaggaggcacaaaatctgaa
ttagtgataacttgggagcccgtgcctgaggaactgcagaatggagagggcttcggttac
atcatcgccttccggccgctgggtgccatcacctggacacgagtggtcatctccacgccc
ggggtggcccgatacatcttccgcaacgacaccatcccgcctttctcaccgtttgatgtg
aaggttggggcgtacaacaaccgtggggaaggccccttcagttccatagccacagtgttc
tcagcagaggaagtccccagtgaggctcctaagcgggtttggggcaggagtgtatctgca
gctacagttgaagtgatttgggaagccctccccgtcacccctgaaagagtgctgggttat
gaggtggtgtactgggaagatgacaccaagcctgacacagtaggcaaagtcagaacctct
ggaaactactcagcggttaatgtgactggactgagcgctaacacacagtattatctagct
gtgtgcgcctttaacactgcagggacagggccacagtctacacacatcaacgccaccacc
aagaagccagcacctggccagcctcctttgaatgtagagtggaccatgattggctctctg
ctcactctacactggggtcctgtgatagccatggagacagaggcagaggtcatcggatat
cttgtgctgttgagaagacaccggtacaatgacgtaaacagcatcataacaaacaaaacc
aggatggagctgacgctgtctcccaacgacaactacttgatccagatcaaggccctgagt
gagggtggtgaaggtgtgggcagcgaacccatccacatccacaaattaagcatgggcgca
cgaggttcgggagcatctaatctcaatccgctatcgctgtctcatctctccgcattcctc
atcagcgctctcctcctcctcaactcctcctggtga
DBGET
integrated database retrieval system