Oncorhynchus mykiss (rainbow trout): 110494614 Help Entry 110494614         CDS       T07259                                  Symbol sf3b3 Name (RefSeq) splicing factor 3B subunit 3   KO K12830   splicing factor 3B subunit 3 Organism omy  Oncorhynchus mykiss (rainbow trout) Pathway omy03040   Spliceosome Brite KEGG Orthology (KO) [BR:omy00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     110494614 (sf3b3)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:omy03021]     110494614 (sf3b3)    03041 Spliceosome [BR:omy03041]     110494614 (sf3b3)    03036 Chromosome and associated proteins [BR:omy03036]     110494614 (sf3b3) Transcription machinery [BR:omy03021]  Eukaryotic type   RNA polymerase II system    Coactivators     SAGA/TFTC/STAGA complex      110494614 (sf3b3) Spliceosome [BR:omy03041]  Complex A   U2 snRNP components    U2 snRNP specific factors     110494614 (sf3b3)  Complex B     110494614 (sf3b3)  Complex C    U2 SnRNP specific factors     110494614 (sf3b3) Chromosome and associated proteins [BR:omy03036]  Eukaryotic type   Histone modification proteins    HAT complexes     STAGA complex      110494614 (sf3b3)     TFTC complex      110494614 (sf3b3) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Beta-prop_RSE1_1st Beta-prop_RSE1_2nd CPSF_A Beta-prop_BBS7 Beta-prop_EML Motif Other DBs NCBI-GeneID:  110494614 NCBI-ProteinID:  XP_021425516 Ensembl:  ENSOMYG00000019657 UniProt:  A0A8C7VRW0 LinkDB All DBs Position 2:complement(69009850..69059398) Genome browser AA seq 1217 aa AA seqDB search MFLYNLTLQRATGITHAIHGNFSGTKMQEIVVSRGKIIELLRPDANTGKVHTLLTMEVFG IIRSLMAFRLTGGTKDYIVVGSDSGRIVILEYHPSKNMFEKIHQETFGKSGCRRIVPGQF LAVDPKGRAVMIGAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP MFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEALEEHGNFLITVPG GSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF FLAQTEQGDIFKVTLETDEEMVTEIRMKYFDTIPVATSMCVLKTGFLFVSSEFGNHYLYQ IAHLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDEQENLSPIMSCQIADLANEDT PQLYVACGRGPKSTLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHIEDEFDAYIIVSFVN ATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGEDALVQVYPDGIRHIRADKRVNEWKTPG KKTIVRCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQ RSRFLAVGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGVEKEDELGVKGTV GFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSW LSYSYQSRFHLTPLSYETLEYASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFP LQYTPRKFVIHPETNNLILIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAA AFLNENLPEAIFGAPKAGSGQWASLVRLVNPIQGTTLDLVQLEQNEAAFSVTVCRFASGG DDWYVLVGVARDMILNPRSVGGGFIYTYRLGGGGDKLEFMHKTPVEDVPLAIAPFQGRVL VGVGKLLRIYDLGKKKLLRKCENKHVPNLVTGIHTIGQRVIVTDVQESLFWVRYKRNENQ LIIFADDTHPRWVTTACLLDYDTMASADKFGNISIVRLPPNTSDDVDEDPTGNKALWDRG LLNGASQKAEVIMNYHIGETVLSLQKTTLIPGGSESLVYTTLSGGIGILVPFTSHEDHDF FQHLEMHMRSEFPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSMDPHKQKSVAEELDRT PPEVSKKLEDIRTRYAF NT seq 3654 nt NT seq  +upstreamnt  +downstreamnt atgtttctgtataacctgaccctgcagcgtgccactggcatcacccacgccatccatgga aacttctcaggaaccaagatgcaggagatagttgtttccagggggaagataattgagctg ctgcgtccagatgccaacacagggaaggttcacaccctgcttaccatggaggtgtttggc atcattcgctccctcatggccttcaggctgacaggaggaactaaagactatattgtggtg ggcagtgactcaggccgcatcgtgatccttgagtaccacccctccaagaacatgtttgag aagatccaccaggagacctttggcaagagtggatgtcgtcgcatcgtccctggacagttc ctcgccgtcgaccctaagggcagagcagtcatgataggtgccattgagaagcagaagctg gtgtacatcctgaacagagatgcagcagcgcgtctcaccatctcctctcccctggaggct cacaaggccaacacgctggtctaccatgtggtaggagttgatgtgggctttgaaaacccc atgtttgcctgtctggagatggactatgaggaagctgacaatgaccccactggcgaggct gcagccaacacccagcaaaccctgaccttctatgagctggacctgggtctgaaccacgtt gtgcgcaagtacagcgaggccctagaggagcacggcaacttcctcattacagttcctgga ggctctgatgggcccagtggagtactcatctgttcagagaattacatcacctacaaaaac tttggagaccagcctgacattcgctgtcccatcccacgcaggaggaatgacctggatgac cctgagcgaggcatgatcttcgtctgctcagccacccacaagaccaagtccatgttcttc ttcctggcccagacggagcagggtgacattttcaaggtcaccctggagaccgatgaggag atggttacagagatcaggatgaagtacttcgacaccatacctgtagccacatccatgtgt gtgctgaagaccggcttcttatttgtgtcctcagagtttggtaaccattacctgtaccag atagcccatctgggagatgacgatgaagagccagagttctcctctgccatgcccctggag gagggagataccttcttcttccagccacgccccctcaagaacctggtgctggtggacgag caggagaacctctcccccatcatgtcctgccagattgctgacttggctaatgaggacact cctcagctgtatgtggcctgtggcaggggacccaaatccaccctccgtgtcctcagacat ggactggaggtatcagagatggctgtgtctgagctgcccggtaaccccaatgctgtgtgg actgtgcgccgacacattgaagatgagtttgacgcgtacatcatcgtttccttcgtcaac gccaccctggttctgtctatcggtgagaccgtagaggaagtgacagactctggcttcctg gggaccacccccaccctctcctgctctctgcttggggaggatgctctggtgcaggtgtat cctgatgggatccgtcacatccgtgctgataagcgtgtgaatgagtggaagactccaggg aagaagaccattgtgcgctgtgcagtcaaccagaggcaggtggttatcgctctgaccgga ggagagctagtctactttgagatggacccttctggccagctgaatgagtacacagagagg aaggagatgtcagctgacgtggtgtgtatgagcttggccaatgtcccccctggcgagcag cgctcccgtttcctggcggtggggctggtggacaacaccgtccgcatcatctcactggac ccctcggactgtctccagcccctcagtatgcaggccctgcctgcccagcctgagtctctg tgtatagtggagatgggaggagtggagaaggaagatgagctaggagtgaagggcactgtc ggctttctctacctcaacatcggactgcagaatggtgtgttgctcaggaccgtgctggac ccagtgactggagacctgtctgatactcgtactcggtacttggggtcgcgacctgtgaag ctcttccgcgtcaggatgcagggacaggaagctgtgttggccatgtcgagtcgctcctgg ctgagttattcctaccagtcccgattccatctgacgcccctgtcctatgagacgctggaa tatgcctctggcttcgcctctgaacagtgtccagagggcattgtggcaatctctaccaac accctgaggattctggccttggagaagctgggtgccgtgttcaaccaggtggccttcccc ctgcagtacacacctcgcaagtttgtcattcacccagagacaaacaacctgatactcata gagactgatcacaatgcctacacagaggccaccaaggcccagcgaaagcagcagatggca gaggagatggttgaggcagctggtgaggatgagagggagcttgcagcagagatggctgct gccttcctcaatgagaacctgccagaggccatctttggggcgcccaaggccgggtctggc cagtgggcctctctggtgcgtcttgtcaaccccatccagggaaccactctggaccttgtc caactggagcagaatgaggctgccttcagtgtgactgtttgtcggtttgccagcggaggt gatgactggtatgtgctggtgggggtggcccgggacatgatccttaacccccgctctgtg ggaggcggttttatctacacctatcggctgggagggggaggggacaaactggagtttatg cacaagactccagtggaggacgttcctctggcaatcgctccgttccagggccgtgtgctg gtgggcgttggcaaactgctgcgcatctatgacctgggcaagaagaagctgctccggaag tgtgagaacaagcatgtgcccaacctggtgactggtatccacaccatcggtcagcgggtc atagtgactgatgtacaggagagtctgttctgggtgcgctacaagcgcaacgagaatcag ctcatcatcttcgctgacgacacccaccctcgctgggtcaccactgcctgcctgctggac tacgacaccatggcttcagccgacaagtttggcaacatcagcattgtgcgccttccccct aacaccagtgacgatgtggatgaggacccaactgggaacaaagcattgtgggatagaggt ctgctgaacggagcttctcagaaggctgaagtgatcatgaactaccacattggggagacg gtgctgtcactgcagaagaccacactgatccctggaggctcggaatctctggtctacaca actctttctggaggcatcggcatcctggtgcccttcacttcccacgaggatcatgacttc ttccagcacttagagatgcatatgcgctcagagttcccccctctgtgtggcagggaccac ctcagcttccgctcctactacttccctgtaaagaatgtgatagatggagatctgtgtgag cagttcaactccatggacccccacaagcagaagagtgttgctgaggagctggaccgtact ccccctgaggtctcaaagaaactggaggacatccgcacacgctatgccttctag

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