Oncorhynchus mykiss (rainbow trout): 110494773
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Entry
110494773 CDS
T07259
Symbol
shmt2
Name
(RefSeq) serine hydroxymethyltransferase, mitochondrial isoform X1
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy00260
Glycine, serine and threonine metabolism
omy00630
Glyoxylate and dicarboxylate metabolism
omy00670
One carbon pool by folate
omy01100
Metabolic pathways
omy01200
Carbon metabolism
omy01230
Biosynthesis of amino acids
omy01240
Biosynthesis of cofactors
omy04981
Folate transport and metabolism
Module
omy_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
110494773 (shmt2)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
110494773 (shmt2)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
110494773 (shmt2)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
110494773 (shmt2)
Enzymes [BR:
omy01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
110494773 (shmt2)
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Motif
Other DBs
NCBI-GeneID:
110494773
NCBI-ProteinID:
XP_036806729
Ensembl:
ENSOMYG00000011457
UniProt:
A0A8C7PVN7
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Position
17:complement(85300306..85342666)
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AA seq
503 aa
AA seq
DB search
MLSLTLRQIARPLCLRAPVALSSVGARRSQHAATRSVEQEAPWTGQDSLAQDDPEMWDLL
RKEKDRQCRGLELIASENFCSRAALEAQGSCLNNKYSEGYPGRRYYGGAEVVDQIELLCQ
KRALEAFDLDPALWGVNVQPYSGSPANFAAYTAVLNPHDRIMGLDLPDGGHLTHGYMSDT
KRISATSIYFESMPYKLNPATGLIDYDQLEMTARLFRPKLIIAGTSAYARLIDYARIKKL
CTEVKAYLLADMAHISGLVAAKAVPSPFKYADMVTSTTHKSLRGARAGLIFYRKGVRSVD
KKGREIQYDLEDRVNFAVFPSLQGGPHNHAIAGVAVALKQAQTPMFREYIGQVMRNAKAM
AEALLSKGYTLVSGGTENHLVLVDLRPKGIDGARAERVLELVSITANKNTCPGDKSALAP
GGLRLGAPALTSRQFKETDFVQVVEFMDEGFKIALDVKKKTGKLADFKNFLLEDPETVSR
MAELKKRVEAFARPFPMPGFEDH
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgctgtcgttgacgttgaggcaaatcgcacggccattgtgcctgcgtgccccggtggcc
ctgagcagcgttggggcgaggaggagccagcatgcggctacccgtagtgtggaacaggag
gccccgtggactgggcaggacagtctggcccaggacgacccggagatgtgggacttgctg
cggaaagagaaggaccggcagtgtcgaggactggagctcattgcctctgagaacttctgc
agtcgggctgcgctggaggcccaaggatcctgcctcaataacaagtactcagagggctac
ccaggcaggaggtactacggtggagctgaggtggtagaccagatagagttgttgtgccag
aagagagccctggaggcctttgacctggaccctgccctgtggggggtgaacgtccagccc
tactctggctctcccgccaacttcgctgcctacaccgccgtcctcaaccctcacgaccgc
atcatgggcctggacctgcctgacggtggacatctgacccatggttacatgtctgacacc
aagaggatatctgctacctccatctattttgagtccatgccctacaagctcaatcctgcc
acagggctcattgactatgaccagctggagatgactgcccgtctcttccggcccaagttg
atcattgcaggcaccagcgcctacgctcgcctcattgactacgctcgcatcaagaagttg
tgtacggaggtgaaagcctacctgctggctgacatggcccacatcagtggtctggtggct
gcgaaggctgtcccctcgccattcaagtatgctgacatggtcacctccacaacacacaag
tccctccggggagccagggctggtctgatcttctaccgtaagggcgtgcgttctgtggac
aagaaggggagggagatccaatatgacctggaggaccgggtcaacttcgctgtgttcccc
tctcttcaggggggaccccacaaccacgccatcgctggggtggctgtcgcactcaaacag
gcccagacgccgatgttcagagagtacattggccaggtgatgcgtaacgccaaggccatg
gctgaggccctactgagcaaaggatacacgctggtgtcaggggggacggagaaccatctg
gtgctggtggacctgaggcctaagggcatcgatggagccagagctgagagagttttggag
ctggtgtccatcacagccaacaagaacacctgtcccggggacaagagtgccctggctcct
gggggcctccggctaggtgccccggcgctgacctccagacagttcaaggagacagacttt
gtccaggtggtggagttcatggacgaaggctttaagatcgccctggacgtcaagaagaag
actgggaaacttgcagactttaagaacttcttgttggaggatccagagacggtctctcgc
atggcagagctgaagaaacgagtggaggccttcgcacggcccttccccatgcccggcttc
gaggatcactag
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