Oncorhynchus mykiss (rainbow trout): 110494778
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Entry
110494778 CDS
T07259
Symbol
mars1
Name
(RefSeq) methionine--tRNA ligase, cytoplasmic isoform X1
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy00450
Selenocompound metabolism
omy00970
Aminoacyl-tRNA biosynthesis
omy01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
110494778 (mars1)
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
110494778 (mars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
omy01007
]
110494778 (mars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
omy03016
]
110494778 (mars1)
Enzymes [BR:
omy01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
110494778 (mars1)
Amino acid related enzymes [BR:
omy01007
]
Aminoacyl-tRNA synthetase
Class I (U)
110494778 (mars1)
Transfer RNA biogenesis [BR:
omy03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
110494778 (mars1)
Prokaryotic type
Other AARSs
110494778 (mars1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
WHEP-TRS
GST_N_5
Anticodon_3
tRNA-synt_1
GST_N_3
Anticodon_1
tRNA-synt_1e
GST_N_4
Motif
Other DBs
NCBI-GeneID:
110494778
NCBI-ProteinID:
XP_036806743
Ensembl:
ENSOMYG00000013360
LinkDB
All DBs
Position
17:86183733..86238354
Genome browser
AA seq
1101 aa
AA seq
DB search
MKLFVSDGNPHCVKVLAVLEFTGVKCDVKHVNHEERVVPYLSRPALPALLLPSGTHLFSP
NSICQYLIELNGQESSDIVNQWLEWEATELQPAVMHALHMVVLQGKGAETPRVLQGPLSY
LDQSLSQRTTLFLTAEMVSVADVVLWAALYPILSDSSLVSGNQTLQLWFERVGMLAACVS
AAQTVLQGKGLKAESLKTYLQRQPTTHHGQGQVQGRGTQPCNSPEGDDDDCVLSEEEIQS
AAVTWGKGLTDLPMVPERQHPILPQEGKRNVLVTSALPYVNNVPHLGNIIGCVLSADVFA
RYGRLRGWNVLYVCGTDEYGTATENKAREEGLTAQQICDKYHAVHASIYQWFQVDFDFFG
RTTTKKQTEIAQNIFWRLHERGFLLEDIVEQLRCEACQRFLADRFVEGTCPFCSYPEARG
DQCDKCGKLINAVELREPTCKVCSQTPVVQSSKHLFLDLPKLEAELEQWLERSTGSGDWT
ANAKQITRSWVRDGLKPRCITRDLKWGTPVPHPDFSDKVFYVWFDAPIGYLSITANYTDQ
WEKWWKNPQQVELYNFMAKDNVPFHSVVFPCSLLGAQDNYTLVNHLVATEYLNYEDTKFS
KSRGVGVFGDMAKDTGIPSDVWRFYLLYLRPEGQDSAFSWVDMATKNNSELLNNLGNFIN
RAGMFVSKFFESCVPAMALQQEDKRLLAQVGWELKQYINLMDRVKIRDALKCILNISRHG
NQYIQVNEPWKKIKGDETDRQRSGTVTGVSVNVACLLSVMLQPYMPTVSHTIRQQLNAPP
SVTGTLLQGTGNFVCSLPAGHHIGTVSPLFQKLESEQIESLKKRFGGQQPEEEEEAKPKP
KTTAQPDVNAQPATTPASDPAAQTAVNGADAERARELTLAVAEQAEKVRTLKGQKAEKTV
IGAEVTKLLELKKQLSLAEGKDPEPVLTKGKKNAQPATTPASDPAAQTAVNGADAERARE
LTLAVAEQAEKVRTLKGQKAEKTVIGAEVTKLLELKKQLSLAEGKDPEPVLTKGKKNAQP
ATTPASDPAAQTAVNGADAERARELTLAVAEQGEKVRTLKGQKAEKTVIGAEVTKLLELK
KQLSLAEGKNPEPVLTKGKKK
NT seq
3306 nt
NT seq
+upstream
nt +downstream
nt
atgaaactattcgtgagtgacggaaatccgcactgtgttaaagtgctagcagtgctcgaa
tttacgggagtcaaatgtgacgttaaacatgtcaaccacgaagagcgagtggtgccctac
ctcagccgtccagccctgcctgccctgctcctccccagtggaacacacctcttcagcccc
aactccatctgccagtacctgatagagctgaatggacaggaatccagtgatatcgtcaac
cagtggctggaatgggaagctacagaactacagcctgcagtgatgcatgcccttcacatg
gtggtgctgcagggaaaaggagcagaaacccccagggttctacagggacctctcagctac
ctggaccagagtctgagccagaggaccacgctgttcctcactgctgagatggtttctgtg
gcagatgtggttctgtgggcagctctctaccctatcctgtctgacagcagtctggtatca
ggtaatcagacgctgcagctgtggtttgagcgtgtgggcatgttggcagcctgtgtgtct
gcagcccagactgtacttcaggggaagggactgaaggcggagtctctgaagacctacctg
cagagacagccaaccacacaccatggtcagggacaggttcagggtagaggcacacagcca
tgcaacagccctgagggtgatgatgatgattgtgtgctgtcagaggaagagatccagtct
gccgctgtcacctggggtaaaggacttacagacttacccatggttccagagagacaacac
cctattcttcctcaggagggcaagaggaacgtcctagtgaccagtgccttgccttatgtt
aacaacgtccctcatctgggcaacatcatcggctgtgtgctcagcgctgacgtctttgcc
aggtatggtcgtctgcgtggttggaatgtactgtatgtgtgtgggactgatgagtacggc
acagctacagagaacaaggcccgtgaggaaggtctgacagcacagcagatctgtgacaag
taccatgctgtccacgcctccatctaccagtggttccaggtcgactttgacttctttggc
cgcaccaccacaaagaagcagactgagatagcccagaacatcttctggcgtctccatgag
cgaggcttcctacttgaagacattgtggagcagctgcgctgcgaggcgtgccagcgtttt
ctagccgaccgcttcgtcgagggaacatgtcccttctgctcttacccagaggcccgaggg
gaccagtgtgacaagtgtggcaagcttatcaacgctgtggagctacgggagcctacttgt
aaggtgtgtagtcagactcctgtagtccaatcctccaaacacctgttcctggacctgccc
aagttggaggctgagttggagcagtggttggagaggtctactgggtcaggggactggacg
gccaatgccaaacagatcaccagatcctgggtgagggacggactcaaaccccgctgcatc
accagagacttgaagtggggaacccctgtacctcaccccgacttctctgacaaggtgttc
tacgtgtggtttgacgctcctattggttacctgtccatcacagccaactacactgaccaa
tgggagaagtggtggaagaacccacagcaggtggagctgtataacttcatggccaaggac
aatgttccgttccacagtgtggtgttcccctgctctctactgggagcacaggacaactat
acactggtcaaccacctggtggctacagagtacctgaactacgaggacaccaagttctct
aagagtcgaggtgttggtgtgtttggtgacatggccaaggatacgggcatcccctctgac
gtgtggcgattctacctgctgtacctccgtcccgagggacaggactcggccttctcctgg
gtcgacatggccaccaagaacaactctgagctgctcaataacctgggcaacttcatcaac
agggctggtatgtttgtcagtaagttctttgagagctgtgtccctgccatggctcttcag
caggaggacaagagactgttggctcaggtgggatgggagctgaagcagtacattaacctc
atggacagagtcaagatccgggatgccctgaagtgtatcctcaacatctctcgccacggt
aaccagtacatccaggtcaacgaaccctggaagaaaattaaaggagacgaaacagacagg
cagcgatcgggtacagtgacaggtgtgtctgtgaatgtggcgtgcctgctgtccgtcatg
ctccagccctacatgccaacggtcagtcacaccatccgccagcagctgaacgctccgccc
tccgttaccgggaccctgctgcagggcacagggaacttcgtctgctctctgcccgccggg
catcacattggcacggtcagcccgttgttccagaaactagagtccgaacagatcgagtct
ctgaagaagaggtttggaggacagcagccagaggaggaggaagaagccaaaccgaagcca
aagacgacagcccagcctgatgtcaacgcccagcctgctacgaccccagcttcagatccg
gctgctcagactgcagtgaacggtgcagacgctgagagagccagggagttaacactggct
gtggcagaacaggcggagaaggtccggaccctgaagggccagaaggcagagaaaactgtg
attggagcagaggtcaccaaactactggaactgaagaaacagctgtccctggctgaggga
aaggacccagaaccagtgctgacaaaagggaagaagaacgcccagcctgctacaacccca
gcttcagatccggctgctcagactgcagtgaacggtgcagacgctgagagagccagggag
ttaacactggctgtggcagaacaggcggagaaggtccggaccctgaagggccagaaggca
gagaaaactgtgattggagcagaggtcaccaaactactggaactgaagaaacagctgtcc
ctggctgagggaaaggacccagaaccagtgctgacaaaagggaagaagaacgcccagcct
gctacaaccccagcttcagatccggctgctcagactgcagtgaacggtgcagacgctgag
agagccagggagttaacactggctgtggcagaacagggcgagaaggtccggaccctgaag
ggccagaaggcagagaaaactgtgattggagcagaggtcaccaaactactggaactgaag
aaacagctgtccctggctgagggaaagaacccggaaccagtgctgacaaaagggaaaaag
aagtga
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