Oncorhynchus mykiss (rainbow trout): 110494780
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Entry
110494780 CDS
T07259
Symbol
nup93
Name
(RefSeq) nuclear pore complex protein Nup93 isoform X1
KO
K14309
nuclear pore complex protein Nup93
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110494780 (nup93)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omy03019
]
110494780 (nup93)
Messenger RNA biogenesis [BR:
omy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
110494780 (nup93)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nic96
RESC9_N
Motif
Other DBs
NCBI-GeneID:
110494780
NCBI-ProteinID:
XP_021425788
Ensembl:
ENSOMYG00000000283
LinkDB
All DBs
Position
2:complement(69276978..69308904)
Genome browser
AA seq
844 aa
AA seq
DB search
MSFWKTRHHPIIVDLRSAGVKLVAMEAEGFGELLQQAEQLAAETEAVSELPHVERNLQEI
QQAGERLRSRTLTRTSQDAADVKASILLGSRGLDIFHISQRLESLSAATTFEPLEPVKDT
DIQGFLKNERDNALLSAIEESRRRTFLLAEEYHRESMLVQWEQVKQRVLHTLLGAGEDAL
DFSQDIEPSFVSDAGVPGRSALDSVEVAYGRQIYVFNEKIVNGHVQPNLGDLCASVADSL
DDKNVSDMWLMVKQMTDVLLVPAKDTLKSRTALDMQMAFVTQALQFLQNSYKNYTMVTVF
GNLHQAQLGGVPGTYQLVRSFLNIKLPGPLPGMQDGEVEGHPVWALIYYCLRCGDLGAAM
QVVNRAQHQLGDFKTWFQEYMNSPDRRLAPATENKLRLHYRRVLRNCADPYKRAVYCLIG
KCDIADNHGEVADKTEDYLWLKLNQVCFDDDGSSAPQDRLTLAQLQKQLLEDYGESHFSA
SQQPFLYFQVLFLTAQFEAAVAFLFRVERLRSHAVHVALVLYELRLLLKSSGQSAQLLSQ
EAGDPPMVRRLNFIRLLMLYTRKFESTDPREALQYFYFLRNEKNNQGENMFMCCVSELVI
ESREFDMLLGRLEKDGSRKPGVIDKFAGDTRAIITKVALEAENKGLFEEAVRLYELAKNP
DKVLELMNRLLSPVIAQVSAAQSNKERLKNTAVAIAERYRTQGVAGEKSADSTFYLLLDL
MTFFDEYHAGNIDRAYDVMERLKLVPLSQDSVEERVAAFRNFSDEVRHNLSEVLLATMNI
LFTQCKRLKGAAAGTPGRPQRSMEDRDSQLRSQARALITFAGIIPYRMAGDTNARLVQME
VLMN
NT seq
2535 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttttggaaaacgagacatcatccaatcatcgtagacctcagaagtgccggggta
aaattggttgccatggaagcggagggctttggagaactcctgcagcaggcagagcagctt
gcagcagagactgaggccgtgtctgagcttcctcatgttgagaggaaccttcaggagatc
cagcaggctggagagaggctacgctcccgcaccttaactcgaacatcacaagacgctgct
gatgtgaaagcgtccatcctccttgggtccagaggcctggacatcttccacatctcccag
cgtctggagagcctgagtgctgccaccacctttgaacctctagagccagtgaaggacact
gacatccagggctttctgaagaatgagagggacaatgcgctgctctctgccatcgaggag
tcacgtcgcaggacgttcctcttggcagaggagtaccaccgcgagtccatgctggttcag
tgggagcaggtgaagcaaagagtactgcacaccctgttgggagcaggggaagatgctctg
gacttcagccaagacatagagcccagctttgtgagtgacgcaggagttcctggacggagt
gctcttgacagcgtggaggtggcctatggacgacagatctatgtttttaatgagaagata
gtgaatggacatgtccagcccaacctgggagacctctgtgcctcagtggcagacagcctg
gatgacaagaatgtgtcggacatgtggttaatggtgaagcagatgacagacgtgctgctg
gtcccagccaaagacacactgaagagccgcacggccttggacatgcagatggctttcgtc
acgcaggccctgcagttcctgcagaacagctataagaactacaccatggtgacggtgttt
gggaacctgcaccaggcccagctaggaggagtccctggcacctatcagctggttcgcagc
ttcctcaacatcaaactgccagggcctctgccaggcatgcaggatggtgaggtggagggt
cacccagtctgggctctgatctactactgcctgcgctgtggggacctgggggctgccatg
caggtggtgaaccgggctcagcaccagctgggagacttcaagacctggttccaggagtac
atgaacagccctgacagacgcctggcccccgccacagagaacaagctgcgtctccactac
cgcagagtgctgaggaactgtgctgacccctacaagagggccgtctactgcctcatcggg
aagtgtgacatcgcagacaaccatggagaggtggccgacaagaccgaggactacctgtgg
cttaagctcaaccaggtgtgcttcgatgacgacggcagcagtgctcctcaggatagactg
acattggcccagctacagaaacagcttctagaggactacggagagtcccacttctcggcc
agccaacagccgttcctgtacttccaggtgctgttcctcacggcccagtttgaggctgct
gtggccttcctgttccgggtggagcgtctacgcagtcatgcagttcacgtggctctggtt
ctctacgagctacggctgctgctcaagtcatcagggcagagcgcacaactgttgagtcag
gaagctggggacccccctatggtgcgtcggctcaacttcatccggctcctcatgctctac
acgcgcaagtttgagtccacagacccccgggaggctctacagtacttctacttcctacgg
aatgaaaaaaacaaccaaggagagaacatgttcatgtgctgtgttagcgagctggtgatt
gagagtcgagagtttgacatgcttctaggaagactggaaaaagatggcagcagaaagcct
ggagtgattgataaatttgccggagacactcgagccattatcacaaaagtggcgctggag
gctgagaacaagggcctgtttgaggaagcagtaagactgtatgagctggccaagaatcca
gacaaggtcttagagctgatgaacaggctgctgagtcctgttatcgcccaagtcagcgct
gcccagtccaacaaggagagactgaagaacactgctgttgccatcgctgagcggtaccgg
acccagggtgttgctggagagaagtctgcagacagcaccttctacctgctgctggacctc
atgaccttctttgatgagtaccatgctggaaacatagaccgggcctacgatgtgatggag
agactgaagctggtccctctgagtcaagacagtgtggaggaaagggttgctgcatttcgc
aatttcagtgatgaggtcaggcataatctgtcggaggtactcctggccaccatgaatatc
ctgttcacgcagtgcaagcggctgaagggggccgcagcaggaacccctggtcgaccacag
aggtccatggaggacagagactcgcagctgcgcagccaagcccgtgcactgatcacgttt
gctgggattatcccgtaccgcatggcaggcgacaccaatgcccggctggtgcagatggag
gtcctgatgaactga
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