Oncorhynchus mykiss (rainbow trout): 110494911
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Entry
110494911 CDS
T07259
Name
(RefSeq) transcriptional repressor CTCF isoform X1
KO
K23195
transcriptional repressor CTCF
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omy03000
]
110494911
03036 Chromosome and associated proteins [BR:
omy03036
]
110494911
Transcription factors [BR:
omy03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
110494911
Chromosome and associated proteins [BR:
omy03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
110494911
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-H2C2_5
zf-C2H2_jaz
zf-C2H2_7th_ZNF462
zf-C2H2_REST
zf-met
Zf-C2H2_ZNF451
zf-C2HE
zf-C2H2_6
Zf-C2H2_ZNF451_C
zf-C2H2_15
Motif
Other DBs
NCBI-GeneID:
110494911
NCBI-ProteinID:
XP_021425923
Ensembl:
ENSOMYG00000000740
UniProt:
A0A8C7LMJ8
LinkDB
All DBs
Position
2:complement(69870801..69892079)
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AA seq
802 aa
AA seq
DB search
MKYSFLVQVLPMDGAPTDVVVEAKDFTYEGEEVVADLLQQAAEGVMDQQPEGVAGLDTQQ
LVEGVNVEMMVMDSLDPALLQLKTEVMDAPVATAHEATVTTVDETQIITLQVVNMDEQQL
GGLRELQLVQVPVSAVPVTQATVEALQGTFVDTTAMPKDGNPVICHTLPLPEGFQVVKVG
ANGEVETVEQDELQHQEEQQVQPEEEEEELQCEPQPEEPQWSKDPDYQPPAKKTIKKAKK
STLRYNTEGDKDNMDVSVYDFEEEQQEGMLSEVNAEKVVGNMKPPKPTKIKKKGVKKTFQ
CELCSYTCPRRSNLDRHMKSHTDERPHKCHLCGRAFRTVTLLRNHLNTHTGTRPHKCQDC
DMAFVTSGELVRHRRYKHTHEKPFKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYA
SRDTYKLKRHMRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIA
RKSDLGVHLRKQHSFIEQGRKCRYCDAVFHERYALIQHQKSHKNEKRFKCDQCDYCCRQE
RHMLMHRRTHTGEKPYACSQCEKTFRQKQLLDMHFRRYHDPNFVPTAFVCTKCGKAFTRR
NTMARHAENCNGDPSEGENGSPPKRGRGGRKRKMRSRKDEDDDDDDDDSEDNADPELDDI
DEEDEEAEEALLEEEEEEEEMMELEQAPPTKPIPAPVEPPVKRKRGRPPKNIPKPSPPAK
ASKAAPKSKAAAAAAVIQVEDENTGAIENIIVKKEQEAEQAAPEVVVEQPEEAGVETVEL
PVADAAPNGDLTPEMILSMMDR
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atgaagtattcctttctagtgcaggtgttaccgatggacggagcaccaacagatgttgtg
gttgaggccaaggacttcacctatgagggggaggaggtggtggcagacctgctccagcaa
gcagcagaaggggtgatggaccagcagccagagggagttgctggtctggatacccagcag
ctggtggagggagtcaatgtggagatgatggtaatggactccctggacccggccctgctg
cagttgaagactgaggtgatggatgcccctgtggctacagcccacgaggccacggtcacc
acggtggatgagacccagatcatcactctgcaggttgtcaacatggatgagcagcagctg
gggggcctcagggagctacagctggtccaggtccctgtctctgctgtccctgtcacccag
gccactgtagaggcgctacagggcaccttcgtggacaccacggccatgcccaaagacgga
aaccctgttatctgccacaccctgcccctgccagagggattccaggtggtgaaggtgggt
gcgaatggtgaggtggaaacagtggagcaggatgagctccagcaccaagaggaacagcag
gtccagcctgaggaggaggaggaggagctgcagtgtgagccccagcctgaagaaccacaa
tggtccaaggaccccgactaccagccccctgccaagaagaccatcaagaaggcaaaaaag
agcacgctgcgctacaacacagagggggataaagacaacatggacgtgtctgtgtatgat
tttgaggaggagcagcaggaagggatgctctctgaggtcaacgcagagaaggtggtgggc
aacatgaaaccccccaaacccaccaaaattaagaagaagggtgtgaagaaaacattccag
tgtgagctgtgtagctacacctgtccccgccgctccaacttggaccgacacatgaaaagt
cacacagatgagaggccccacaagtgccatctgtgtggaagggccttcaggactgttacc
ctgctaaggaaccacctcaacacacacacaggtaccagaccacacaagtgtcaagattgt
gacatggccttcgtgaccagtggagagctggtccgacatcgtcgctacaagcacactcat
gagaaacccttcaagtgctccatgtgtgactatgccagtgtagaggtgagcaagctaaag
cggcacatccgttcccacactggggagcgtccgttccagtgcagtctgtgcagctacgcc
agcagagacacctacaagctgaagagacacatgaggacacactcgggagagaagccgtac
gagtgctatatttgccacgcccgtttcacccagagtggaaccatgaagatgcacatcctg
cagaagcacacagagaacgtggctaagttccactgcccccactgtgacacagtcatcgcc
cgaaagagtgacctgggtgtccacctgcgaaaacagcactcgttcattgagcagggcagg
aaatgtcgttactgtgatgctgtgttccacgagcgctatgcactcatccagcaccagaag
tcccacaagaacgagaaacgcttcaagtgtgaccagtgtgattactgctgcagacaggag
cgccacatgctgatgcacaggcgcacccacacaggagagaagccttacgcctgtagccag
tgtgagaagaccttccgtcagaagcagctcctggacatgcacttccggcgttaccatgac
cccaactttgtgcccaccgcctttgtgtgcaccaagtgtggcaaggccttcacccgcagg
aacaccatggccagacatgcagagaactgtaacggggatcctagtgaaggagagaacgga
tccccacccaagaggggacgaggtgggaggaagaggaagatgcgctcaaggaaggacgaa
gacgatgatgatgacgatgacgacagtgaggacaatgctgatcctgagctggatgacatt
gatgaagaggatgaggaggctgaggaagcactgctggaggaagaggaggaggaggaggag
atgatggagttggagcaggctccacccaccaaacctattcctgcccctgtagagccacct
gtcaagaggaaacgcggcagacctcccaagaatattcccaaaccctcccctcccgccaaa
gccagcaaggctgcccccaaaagcaaggctgctgcagctgcagccgtcatccaggtggag
gatgagaataccggcgccatagagaacatcatagtgaagaaggagcaagaggctgagcag
gctgccccagaggtggtggtggagcaaccagaggaggcaggggtggagacggtggagctg
cctgtagcagacgctgcccccaacggagacctcacccctgagatgatcctcagcatgatg
gaccggtga
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