Oncorhynchus mykiss (rainbow trout): 110494953
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Entry
110494953 CDS
T07259
Name
(RefSeq) dihydropyridine-sensitive L-type skeletal muscle calcium channel subunit alpha-1 isoform X1
KO
K04857
voltage-dependent calcium channel L type alpha-1S
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04010
MAPK signaling pathway
omy04020
Calcium signaling pathway
omy04260
Cardiac muscle contraction
omy04261
Adrenergic signaling in cardiomyocytes
omy04270
Vascular smooth muscle contraction
omy04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
110494953
04020 Calcium signaling pathway
110494953
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
110494953
09153 Circulatory system
04260 Cardiac muscle contraction
110494953
04261 Adrenergic signaling in cardiomyocytes
110494953
04270 Vascular smooth muscle contraction
110494953
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
omy04040
]
110494953
Ion channels [BR:
omy04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
110494953
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
CAC1F_C
Motif
Other DBs
NCBI-GeneID:
110494953
NCBI-ProteinID:
XP_036804072
Ensembl:
ENSOMYG00000037858
UniProt:
A0A8C7TCY6
LinkDB
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Position
17:50665178..50697862
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AA seq
1832 aa
AA seq
DB search
MAESGGEPNLQSYIMDEETLKRKQKEKLKKLLATGGNPRPARSLFFLTLKNPFRKAAINI
VEWKPFEIIILLTIFANCVALAVFLPMPEEDSNNTNSNLESLEYIFLIVFSIECFLKIIA
YGFLFHENAYLRNCWNILDFVCVSVGLFAVIGDFITYISGVEAQPGDKGGGFDMKALRAF
RVLRPLRLVSGVPSLQVVMNSILKSMLPLFHISLLVFFMVTIYAIVGLELFKCKMHKTCY
YTGTNIIATVENEKASPCAQAGNGRRCTINGTECRAGWAGPNNGITHFDNLGFAMLTVYQ
CITTQGWTDVLYWVNDAIGMEWPWMYFLTLILVGSFFVLNLVLGVLSGEFTKEREKGKAR
GEYTEMRETQQLDEDLKGYMEWITQAEVMDADGEGQGLLTLEDGESEAGSLKDMDTMQKI
MYYYKLARKWNIFFRRKCLVYVKSRMFYWWVILLVFLNTLAIATEHHKQSQQLTEWQDTA
NKVLLSLFAIEMFMKMYALGLQQYFMSLFNRFDCFVVSTGILELVLVGMDVMTVMGISVL
RCIRLLRLLKVTKYWTSLSNLVVSLLNSTPSIACLLLLLFLFIVIFSLLGMQVFGGKFNF
PNAPKPRSTFDSFPQALISVFQILTGEDWNSVMYDGIMAHGGPTMPGILVSIYFIILFVC
GNYILLNVFLAIAVDNLAEAESLTMAQKEKSEEKKRKKLLRANMPDKATEEKALLAKKLA
AERAKIEGIPTTAKLRVDEFESNVNEIKDPFPPADFPGDDEEEEPDIPDTPRPRPMADLQ
LKEEVVPIPEASSFYIFSSDNKIRKLCHRIINATAFTNIILLFILLSSISLAAEDPIDPM
SFRNQVLASADVVFTSVFTVEVVLKMTVYGAIMHPGSFCRNSFNILDLIVVSVSLLSMLM
ESSAISVVKILRVLRVLRPLRAINRAKGLKHVVQCVFVAIKTIGNIVLVTMLLDFMFACI
GVQLFKGKFYACTDPDKMTEEECKGNYIRYQEGAIHPMTIHKREWINAELNFDNILEGML
ALFTVSTFEGWPKLLYKAIDSNMEDMGPVYNNRIAISIFFIVYLILIAFFMMNIFVGFVI
VTFQEQGEQEYKNCELDKNQRACVEYALKARPLRCYIPKNPYQYNVWYIVTSCYFEYLMF
LLIMLNTMCLGMQHCNQSTHVTDLSDMLNVIFTVLFTVEMVLKLMAFKAKGYFGDPWNVF
DFVIVIGSVVDVILSEVDAALASSGGLYCLHGCAEVNPMQAIADSENARVSITFFRLFRV
MRLVKLLNRSEGIRNLLWTFIKSLQALPYVALLILMLFFIYAVVGMQIFGKIALIDGTYI
NRNNNFQTFPHAVLLLFRCATGEAWQEVMLACLYGKRCDPKSDYLPGEEMTCGASFAIIY
FMSFYMLCAFLIINLFVAVIMDNFDYLTRDWSILGPHHLDEFRKIWAEYDPEATGRIKHL
DVVTLLRRIQPPLGFGKFCPHRVACKRLVSMNMPLNSDGTVTFNATLFALVRTALKIKTE
GNFEKANEELRAIIKKIWKRTSMKLLDQVIPPIGDDEVTVGKFYATFLIQDYFRKLKKRQ
EEYYGFRPTKKNAKNEIQAGLRSIEEEEAPELQRAISGDLMNEEEMDRAMEDAAEEGIFR
RAGGLFGNHVDSFTMEEGTRDPNATQVTSQRPLQMSRSDDGEATSSPAYHANEDFFPSTP
NKTNNNNVNNSAGESFSCGTYDRVQVYTISTSRSPPDRDWQLQTVGGPRQDAEPHREPLS
LQQAQGPDSAFDTLIQEVLINGGLESLARDPRFVSVTKREMAEALNFDPMDMESSATELM
NGRRGSVVTPPIRPPRRSQRKANQSTTPRDVV
NT seq
5499 nt
NT seq
+upstream
nt +downstream
nt
atggcggagagtggcggcgagcctaacctgcagtcctacattatggacgaggaaactctg
aagaggaagcagaaggagaagctgaagaagctcctggccacggggggaaaccctcggccc
gcacgctccctcttcttcctcacattgaagaaccccttccgcaaggctgccatcaacatt
gtggaatggaaaccgtttgagatcatcatcctgctgaccatctttgccaactgtgtggcc
ctggctgtgttcctgcccatgcctgaggaggacagcaataacaccaacagcaacctggaa
agtctggagtacatcttcctcatcgtcttctccatagagtgctttctaaaaataatagcc
tatggatttctatttcacgagaatgcgtatctgcggaactgttggaacatactggatttt
gtctgtgtatctgtggggctgtttgcagtcatcggggacttcatcacctatatcagtggt
gtggaggctcaaccaggggacaagggaggaggcttcgacatgaaggccctcagggcattc
agggtgctccggcccctcaggctggtctctggagtccccagcctgcaggtggtgatgaac
tccatcctgaaatccatgctacctctgttccacatctccctgctggtcttcttcatggtc
accatctacgccatcgtgggactggagctgttcaagtgcaagatgcataaaacctgctac
tacacaggcacaaatatcatagccacagtggagaatgagaaggcatctccatgtgcccag
gccggtaatggtcggcgctgcaccatcaacgggacagagtgtagggcgggatgggccgga
cccaacaacggcatcacacactttgacaacctgggcttcgctatgctcactgtctaccag
tgcatcactacccagggctggaccgacgtgctctactgggtgaatgatgccatcggtatg
gagtggccgtggatgtactttctgacactcatcttggttggctccttcttcgtactcaac
ctggttctgggtgtgctcagtggtgaattcactaaggagcgagagaagggtaaggcgcgt
ggagagtacacagagatgagggagacccagcagctggatgaggatctgaagggctacatg
gagtggatcacacaggccgaagtcatggacgccgatggggaaggacagggcctgctaacg
ctggaggatggagaatctgaggcagggagcctaaaggacatggacaccatgcaaaaaata
atgtactactacaagctggctcgtaaatggaacattttcttccggcgtaagtgtcttgtg
tatgtgaagtcccgtatgttctactggtgggtgatccttctggtgttcctgaacacgctg
gccatcgctactgaacaccacaagcagtcccagcaactcaccgagtggcaagacactgcc
aacaaggtgctgctgtctctgttcgccattgagatgtttatgaagatgtacgccctgggt
ctccagcaatacttcatgtctctgttcaaccgcttcgactgcttcgtggtctccaccggc
attctggaactcgtcctggtcggcatggacgtcatgaccgtcatggggatctctgtgctg
cgctgcattcgactcctcaggctgctcaaagtaaccaagtactggacgtctctcagtaat
ctggtggtgtccctgctgaactcaaccccctccatcgcatgcctgctcctcctcctcttc
ctcttcatcgtcatcttctctctgctgggcatgcaggtgttcggggggaagttcaacttc
cccaatgcgcccaaaccccgcagcacctttgacagcttcccccaagctctcatcagtgtc
ttccagatcctgacgggggaggattggaactctgtgatgtatgatggcatcatggcgcat
ggcggtcccaccatgcccgggatcctcgtcagcatctacttcatcatcctcttcgtctgc
ggaaactacatcctgctgaatgtgttcctggccatcgccgtggacaacctggcggaggct
gagagtctgaccatggcccagaaggagaagtctgaggagaagaaacgcaagaagctgctc
agggctaacatgcctgacaaggccacagaggagaaagccctcctggccaagaagcttgca
gcggagagagccaaaatagagggcatccctaccacagccaagctgagagtggacgagttt
gagtccaacgtgaacgagatcaaggaccccttcccgcctgctgacttccctggtgatgat
gaggaggaggagcctgatatccctgacaccccgaggccacggccaatggcagacctgcag
ctgaaggaggaggtggtgcctattccagaggccagctccttctatatctttagctctgat
aacaagatccgtaagctgtgccaccgcatcatcaacgccaccgccttcaccaatatcatc
ctcctcttcatcctcctcagcagcatctccctggctgccgaggaccctatcgaccccatg
tccttcaggaaccaggtgctggcctccgctgatgtggtcttcacctcagtgttcactgtg
gaagttgtcctcaagatgaccgtatacggcgccatcatgcaccccggctccttctgccgg
aactcctttaatatcctggatctgattgtggtcagcgtatccctcctctccatgctcatg
gagtccagtgctatctctgtggtgaagatcctcagggtgttgagggtgctgaggccccta
agggccatcaacagggccaagggcctcaagcatgtggtccagtgtgtttttgtggccatc
aaaaccattggcaacatcgtgctggtcaccatgctgctagacttcatgttcgcctgcatt
ggagtccagctcttcaagggcaaattctatgcctgcacagatcctgacaaaatgacagag
gaggagtgcaagggcaactacattaggtaccaggaaggtgccatccatccgatgaccatc
cataagagagaatggatcaatgcagagctcaactttgacaacatcctcgaaggcatgctg
gctctcttcactgtctccaccttcgagggctggccaaagttgctctacaaggccatagac
tctaacatggaggatatgggtccggtgtacaacaaccgcatcgccatctccatcttcttc
atcgtctacctcatcctcatcgctttcttcatgatgaacattttcgtgggtttcgtcatc
gttacatttcaggagcagggagaacaggagtacaagaactgcgagctggataagaaccag
cgtgcgtgtgttgagtacgccctgaaagcccggccgctgcgctgctacattcctaagaac
ccgtaccagtacaacgtgtggtacatcgtcacctcctgctactttgagtacctgatgttc
ctgctcatcatgctgaacaccatgtgtctggggatgcagcactgtaaccagtcaacccat
gtgaccgacctgtcagacatgctgaacgtgatcttcactgtgctcttcactgtggagatg
gtcctcaaactcatggccttcaaagctaagggttactttggagacccttggaacgtcttt
gactttgtcatcgtcatcggcagcgtcgttgacgtcatcctgagtgaagtcgatgcagcc
ctggcctcctctggaggactatactgtctccacggctgcgctgaagtgaacccaatgcaa
gcgatagcagattctgaaaatgcccgtgtgtcaatcaccttcttccgactgttccgtgtg
atgcgtctggtgaaactgctgaaccgttctgaagggatccggaaccttctgtggaccttc
atcaagtccttacaggccctgccctacgtcgccctgctcatcctcatgctgttcttcatc
tatgctgtggttgggatgcagatatttggtaagatagcgctaatagacgggacgtacatc
aacaggaacaacaacttccagacgttcccccatgctgtgctgctgctcttcaggtgtgcg
acaggtgaggcgtggcaggaagtaatgttggcgtgtctgtatgggaagaggtgtgaccct
aagtcagactacctgcctggggaggagatgacctgtggagccagcttcgccatcatctac
ttcatgagcttctacatgctctgtgccttcctgatcatcaacctgtttgtggcggtcatc
atggacaactttgactaccttacacgtgattggtccatcctgggtcctcatcacctggac
gagttcaggaagatctgggcagagtacgacccagaggccacggggcgtattaagcacctg
gacgtggtgactctgctgcgtaggatccagcctcctctgggttttggaaagttctgcccc
catagagtagcctgcaagagactggtgtccatgaacatgccactcaacagtgacggaacg
gtcacctttaacgctacgctgttcgcactggtcaggaccgcgctgaagatcaagactgaa
ggaaattttgagaaggccaatgaggagctgagggccatcatcaagaagatctggaaacgc
accagtatgaagctgctggaccaggtcatcccaccaatcggagatgatgaggtgaccgtg
gggaagttctacgccaccttcctgatccaggactacttcaggaagttgaagaagagacag
gaggagtactatggcttccgccccaccaagaagaacgccaagaatgagatacaggcaggt
ctgaggagcattgaggaggaggaagctccagagctgcagagagccatctccggagacctg
atgaacgaggaggagatggacagagccatggaggacgcagcagaggagggtatcttcagg
cgggcgggcggtctgtttgggaaccacgttgattccttcaccatggaggaaggaacccgt
gaccctaacgctacacaggtgaccagccagcggcccctgcagatgagcagatcagacgac
ggggaggctaccagttcacctgcctaccatgcaaacgaggacttcttcccctcaacgcct
aacaaaaccaacaacaacaatgtcaacaacagtgccggggagagcttttcttgtgggaca
tatgaccgggttcaggtctataccatctcaaccagcagaagtcccccagacagagactgg
cagctgcagacagtaggtgggcccaggcaggatgctgagccccacagagagccgctcagc
ctccagcaggcccagggcccagacagcgccttcgatacacttatacaggaggtcttgata
aacggtgggctggagagcttggccagggaccctcgttttgtgtcggtgacaaaacgggaa
atggctgaagcgttaaactttgaccctatggacatggaaagttccgccactgagcttatg
aatggtcgcagagggagcgttgtcacgcctccaatcaggccccctcgcagatcacagaga
aaggccaaccaatcaacaacacccagggatgttgtgtag
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