Oncorhynchus mykiss (rainbow trout): 110494954
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Entry
110494954 CDS
T07259
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-3
KO
K04860
voltage-dependent calcium channel alpha-2/delta-3
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04010
MAPK signaling pathway
omy04260
Cardiac muscle contraction
omy04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
110494954
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
110494954
04261 Adrenergic signaling in cardiomyocytes
110494954
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
omy04040
]
110494954
Ion channels [BR:
omy04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
110494954
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA_N
VGCC_alpha2
dCache_1
VWA
VWA_3
VWA_2
MCP-like_PDC_1
VWA_CoxE
dCache_2
Motif
Other DBs
NCBI-GeneID:
110494954
NCBI-ProteinID:
XP_021425968
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All DBs
Position
17:49604663..49657967
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AA seq
1087 aa
AA seq
DB search
MLWNWRILFPHVCCASFLLSWIMLGTVVEVMGSQPGIPLSVVKLWASAFGGEIKSISAKY
SGSQLLQKKYKEFEKSVRVEEIDGMKVVKTLAKKMEEMFRMKKEAMRRLVEAAEEAHLQH
EEDPELQYEYFNAVLINEVDEEGNNVELGGEFVLEPNDHFNNLSVNLSLSVVQVPTNMYN
KDPAIVNGVYWSEALNKVFVDNFEKDPSLIWQYFGSAKGFFRQYPGVKWHPDEHGVIAFD
CRNRKWYIQAATSPKDMVILVDVSGSMKGLRLTIARQTVSSILDTLGDDDFFNIIAYNQE
MHYVEPCLNGTLVRADRNNKAHFREHLDKLFAKGIGLLGDALTEAFTILNDFNQTGHGSV
CSQAIMLVTDGATQMYDDVFAKFNWPDRKVRIFPYLIGRESAFADNMKWMACANKGYFSQ
ISTLADVQENVMRYLHVMSRPKVIDHEHDTVWTEAYVDSTLSQAHKSRNKKGPSLMTTVA
MPVFSTKNETKNQGILLGVVGTDIPLQELMKIIPKHLLGIHGYAFAITNNGYILTHPDLR
PLYQEGQKRRKPNYSSVDLSEVEWEDKDDFLRNAMVNRKTGTFSMEVKKTVDKGKRLLKM
HNDYFYTEVKGTPFSVGVALSRGHGKFFFRGNVSVEAGLLDLEQPDVALADEWTYCNTDE
HHEHRSLSQIQAIKLYLTGRKPHIKCDRELIQEVLFDAVVTAPLEAYWTGLALNKSENSD
KGVEIAYLGTRTGLSRTSLFVVPEHLSNQDFLTAEDKEGVFNADHFPLWYKRAAEQVPGT
FVYSIPFGGNENKSVVLASTAIQLLDDRKSPIVASVGIQMKLDFFQRKFWTASRQCAALD
GKCTISCDNEDIKCYLIDNNGFILVTEDYSQTGLFFGEVESAVMNKLLLMGSFKRITLYD
YQALCRVYAGSSDSARSLSHPFSIVKWLLTKLVIFLLEFNLYSWWHVDLSVKAQRSRGKT
MMVPCDTEYPAFVSERTIKETTGNIDCEGCARSFVIQQIPSSNLFMVVVDNKCDCSSAPL
VSMDPIEIIYNESLKCDRLKFQKDRKRPETCHPFHPEENAMECGGTAGLSAPLTAALLPL
LATFISR
NT seq
3264 nt
NT seq
+upstream
nt +downstream
nt
atgctgtggaattggaggatcctctttccacacgtgtgctgcgccagcttccttctgtcc
tggattatgctgggcacggtggtagaggtgatggggtcccagccagggattcctctctca
gtggtgaagttatgggcctcagcgtttggtggagaaattaaatcaatttctgcaaaatac
tctggatcccagctgctgcagaagaaatataaagaatttgagaagtccgtccgagtggaa
gaaattgatggcatgaaagtggtcaaaactctcgcaaagaagatggaggaaatgttccgg
atgaaaaaggaggccatgcggcggctggtggaggcagcagaggaggcccatctacagcac
gaggaggatccagagctgcagtatgagtactttaacgcggtgctgatcaatgaggtggat
gaggagggcaacaatgtggagctgggaggcgagttcgttctggaacccaacgaccacttc
aacaacctgtcagtcaacctcagcctcagtgtggtgcaggtgcccaccaacatgtacaac
aaagatccagccatagtgaatggggtgtactggtcagaggccttgaataaagtgtttgtg
gataactttgaaaaagatccatccctgatatggcagtactttggcagtgccaagggcttc
tttaggcagtatcccggggtcaaatggcatccagacgaacacggggtcatcgccttcgac
tgcaggaacaggaagtggtacatccaggcagcgacgtctcctaaagacatggtgatcctg
gtggacgttagtggcagtatgaagggcctgagactgaccattgccagacagacggtctcc
tctatactggacacactgggagacgacgacttcttcaacatcatcgcttacaatcaggag
atgcactatgtggagccttgtctgaacggtacattggtacgagcagacagaaataataaa
gctcatttccgagaacatctggacaagctgttcgccaaagggattggtctgctgggtgat
gctctgaccgaagcgttcaccattttaaatgattttaaccagactgggcatggcagtgtg
tgtagccaggctatcatgctggtgactgacggggcaacgcagatgtacgacgatgtcttc
gccaagttcaattggccagacagaaaggtgcgcatattcccttacctgattggccgagag
tctgcctttgctgataacatgaaatggatggcctgtgctaataaagggtatttcagtcag
atctccacactggctgacgtacaggaaaatgtgatgaggtatcttcatgttatgagtcgt
cctaaagtcatcgaccatgagcatgacacggtctggacggaggcctacgtggacagcact
ctctcccaggcacacaagtccagaaacaagaagggcccaagcctgatgaccactgtggcc
atgcctgtgttcagcaccaagaacgagaccaagaaccagggtatactcctaggggtagtg
ggcacagacattcctcttcaggaactcatgaagatcatccctaaacacctgctgggtatc
cacggttacgcctttgccatcacaaacaacggctacatcctgacccatccggacctgagg
ccactgtaccaggagggccagaagaggaggaaacccaactacagcagtgtggacctgtca
gaagtggagtgggaggacaaggatgactttctgcgtaatgccatggtcaacaggaagact
gggacattctccatggaggtgaagaagacagtggacaaagggaaaagactcctgaagatg
cacaatgactatttctacactgaagtcaagggaactcccttcagtgttggagtggctttg
tctagaggccatggcaaattcttcttcagaggaaacgtctcagtggaagcagggctcctt
gacctggaacagccagatgttgccttggcagatgaatggacgtattgcaacacagatgag
caccatgagcaccgctccctctcccagatccaggccattaaactctacctgactggacgc
aagccacacatcaaatgtgacagggagctgatccaggaggtgttgtttgatgctgtggtc
acagccccactggaggcctactggaccggcctggccctcaacaagtccgagaactcagac
aaaggagtggagattgcttacctaggcacacgcactggcctctctagaaccagcctgttt
gttgtcccagagcacctatccaatcaagacttcctgacggcagaggataaggagggggtg
ttcaacgctgaccacttccctctgtggtacaagagagcagcagagcaggttcccggcacc
ttcgtctactcgatcccctttggaggaaatgagaataagagtgtggttttggccagcact
gccatacaactgctggatgacaggaagtcgcctattgttgcctccgttgggattcagatg
aagctggatttctttcagaggaagttctggactgctagtagacagtgtgccgctctggat
gggaagtgcaccattagctgtgataatgaggacatcaagtgttaccttattgacaacaac
ggatttattctggtcacagaggactactctcagacggggctgttctttggagaggtggag
agtgctgttatgaacaagctgcttctcatgggctccttcaaaaggatcactctgtatgac
taccaggctctctgtagagtgtatgctggcagcagtgacagcgcccgctctctatcacat
cccttctccatcgtgaaatggctcctgaccaaacttgtcattttcctgctggagttcaac
ctttacagctggtggcatgttgatctctcagtcaaagcccaaaggtcgaggggaaagacc
atgatggtgccatgtgacacggagtaccctgcatttgtctctgagcgtaccatcaaagag
accacgggaaacattgactgtgaggggtgtgccagatcttttgtaattcagcagattccc
agcagtaatctcttcatggtcgtcgtggacaacaagtgtgactgcagctctgcccccctg
gtttccatggatcccatcgagattatatacaatgagtctctgaaatgtgataggctgaag
tttcagaaagacagaaagcggccagaaacgtgtcatccttttcaccccgaggagaatgcc
atggagtgtggaggaacagcaggcctctctgccccccttacagcagcactgctcccccta
ctggccactttcattagcaggtga
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