Oncorhynchus mykiss (rainbow trout): 110494955
Help
Entry
110494955 CDS
T07259
Symbol
usp48
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 48 isoform X1
KO
K11858
ubiquitin carboxyl-terminal hydrolase 48 [EC:
3.4.19.12
]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
omy01002
]
110494955 (usp48)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
omy04121
]
110494955 (usp48)
Enzymes [BR:
omy01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
110494955 (usp48)
Peptidases and inhibitors [BR:
omy01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
110494955 (usp48)
Ubiquitin system [BR:
omy04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
110494955 (usp48)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
DUSP
ubiquitin
Usp-48
Motif
Other DBs
NCBI-GeneID:
110494955
NCBI-ProteinID:
XP_021425969
Ensembl:
ENSOMYG00000037256
LinkDB
All DBs
Position
17:complement(50459542..50483933)
Genome browser
AA seq
1051 aa
AA seq
DB search
MAPRVQLEKAAWRWVESVRPEDIQREHIEIAYRICVPACKRGACRRNCKGNPNCLVGIGE
HAWLGEIDENTFHNIDDPNSERRDKNTFVGLTNLGATCYVNTFLQVWFHNLELRRTLYLC
QNARAEEHNMDSDYEPRSICEHLQYLFALLQNSNRRYIDPSGLVKALGLDTGQQQDAQEF
SKLFLSLLEDTLSKQKNPNLHNVIQQQFCGQMSYVTVCNQCGRASPLPSRFYELELNIQG
HKNLTECVTEFLKEEKLDGDNRYFCESCQSKQNAARRIKLHSLPRVLNLQLMRFVFDRQT
GHKKKLNTFISFPEQLDMGPFLEEKEDEKCVYELSAVLIHRGVSAYSGHYIAHVRDARTS
DWYKFNDEEIEKMEGKKLQLGIEEDIAETVKSQTRKPKCSKGYHCSRNAYMLVYKCQREE
DTDPMETNVEVPGFLGRLVDRDNRKFEEWCLEMADMRKQSVDKGKAKHEEVKELYELLPA
EDGQEYEFVPLEWLKKWLDDSTVTKEIDNGNFLCSHGKLHPDKVGEAKRISVKAAELLFD
KYGGGPRLDGSTLCEECVGQRCRVLRLKNQLAEDYKEVTNLVKCPPKSDEGYWAGKTSLR
SWRQLALEQLEEDEEETKHSNGKTNGEGPEITATKEYGPENLDGDEEEMKTFNEDILCRH
GGLSILESERRLVTEEVWSKLRVYFPKAPQFTQLQEPCQQCLRLEREGKENEALNRMMAS
EQKSSLLNLFQEKNRPTLTKWPQETDILYIVPLFFVDEWRRFIRRPTKTTPVSSVGNSLL
LCPHRGFMFTFDSMLKGDAQHIALLWPDEWEVISRHFLVDQPISICRISGATPNGSSVEY
TTQPELCRDCREGFIFQQQRDMREYAQATVYVRKVIDDKRLKDAAPEMNVSGSEAEDERE
EPVAKVDGERDPDFSQSEDGAKRQKLSDGTVSAAASPTPMASGGKSGIRRSTRHRKLRGE
KALIVSANQTLKELKIQIMHAFSVAPFDQNLSIDGRCLTDDSATLGSLGVIPESVICLKA
DEPIADFAAMDDVYQVCMPEEGFKGTGLLGH
NT seq
3156 nt
NT seq
+upstream
nt +downstream
nt
atggcgcctcgcgtacagcttgagaaagcagcctggcgctgggtcgagtcggtgagacca
gaggacatacaacgggaacatattgagatagcttaccgaatctgtgtaccggcgtgcaag
aggggagcatgcaggaggaattgcaaagggaacccaaattgtcttgtcggtattggggaa
catgcctggttgggagagattgacgagaacaccttccacaacattgacgatcctaactcg
gagcgccgggacaagaacacgtttgtgggtctgacaaacctgggcgccacatgttacgtc
aacacctttctgcaggtgtggttccacaacctggagctgcgtaggaccctgtacctgtgt
cagaacgccagggcagaggagcacaacatggactcagactacgagcctcgcagcatatgt
gaacacctgcagtacctgtttgcactgctacagaacagcaacagaaggtacattgacccc
tcagggctggtcaaggctctggggttggacacaggacaacagcaggacgctcaagagttt
tccaagctcttcctctcgctattggaggacaccttatccaaacagaagaacccaaacctg
cataatgtcatccagcagcagttctgtggccagatgtcttacgtcactgtgtgtaaccag
tgtggtcgtgcttctcctctgccgtcccgattctacgaactggagctcaacatccagggc
cacaagaaccttacagaatgtgtcacagagttcctcaaggaggagaagttggatggtgac
aaccgctacttctgtgaaagctgccagagcaaacagaacgccgctcgacgcatcaaactg
cacagcctcccacgggtactcaacctgcagctgatgcgtttcgttttcgacagacaaacg
ggtcacaagaagaagctcaacaccttcatcagtttcccagagcagctggacatgggcccg
tttctggaggaaaaagaagatgagaagtgtgtgtacgagctgagtgcggttctgatccac
cgcggggtcagcgcctactcgggtcactacatcgcccacgtgcgagacgcccgcaccagc
gactggtacaagttcaacgacgaggagattgagaagatggaaggcaaaaagctacagctg
ggcatcgaggaggacatcgccgagacggtgaagtcccaaacccgtaagcccaagtgcagt
aaaggatatcactgttccagaaatgcctacatgctggtgtacaaatgccagagagaggag
gacactgaccccatggagaccaacgttgaggtgccaggctttctggggagactggtggac
cgagacaacaggaagtttgaagagtggtgcctggaaatggccgacatgcgcaagcagagc
gtcgacaagggcaaggccaagcacgaagaggtgaaggaactctacgagcttttacctgcg
gaagacggccaagagtatgagtttgtgcctctggagtggctgaagaaatggctggatgac
tcgacggtcaccaaagaaatcgacaacggcaacttcctgtgttctcacggtaaactgcac
cccgacaaggtgggggaggccaagaggatctccgtcaaagctgcagagcttctcttcgac
aaatatggaggaggacccaggctagatggctcaactctctgtgaggaatgtgtggggcag
agatgcagggtgctgcggctaaagaaccagctggccgaggattacaaagaagtcaccaac
cttgtcaagtgcccgcccaaaagtgatgaggggtactgggcgggcaagacatctctgcgg
agctggagacagttggccttggagcagctggaggaggatgaggaggagaccaaacacagc
aacggcaaaaccaacggagagggaccagagatcactgctactaaagagtacggcccagag
aacctggacggagacgaggaggaaatgaagaccttcaacgaggacatcctctgtcggcat
ggcggtctgagtatcctggagagcgagcggcggctggtgactgaggaggtgtggtccaaa
ctgagggtgtacttccccaaagccccccagttcacccagctacaggagccctgtcagcag
tgcctgaggctggagcgagaggggaaagagaatgaggctctgaacaggatgatggcgtca
gaacagaagagctccttactcaacctcttccaggagaagaacaggcccacactcaccaag
tggccacaggagacagatattctctacatagttcctctgttctttgtagacgagtggaga
aggttcatcaggaggcccactaagaccaccccagtgtcaagcgtagggaacagtttactc
ctatgtccacatagaggcttcatgttcaccttcgactccatgttaaagggagacgcccaa
catatagctcttctctggcccgacgaatgggaggtgatcagcagacacttcctggttgat
cagccaatctccatctgccggatcagcggggccacacccaacggctccagtgtggagtac
accacccagcctgagttgtgtagggactgcagagaaggcttcattttccagcagcagaga
gacatgagagagtatgcacaagccacagtctacgtacgcaaggtcatagacgacaagagg
ttgaaggatgcagctcctgagatgaatgtgagcgggtcggaggcagaggatgagagggag
gagcctgttgctaaggtggatggagagcgagaccctgatttcagccagtcagaggacggg
gcaaagcgtcagaagctgagtgatggcaccgtcagtgctgctgcaagtcccacccccatg
gccagtggtggcaaatcggggatcaggaggagcacgaggcacaggaagctccggggagag
aaagcactcatcgtctcagccaatcagacgctcaaggagttgaaaatacagatcatgcac
gccttctccgtggccccgtttgatcagaacctgtcgatcgacggccggtgtcttacggac
gattctgccaccctcggcagcctaggagtcatcccagagagcgtcatctgtctgaaggct
gatgaacccatagcagattttgcagcaatggatgatgtttatcaggtgtgtatgcctgaa
gaaggattcaaagggactgggcttcttggccactga
DBGET
integrated database retrieval system
