Oncorhynchus mykiss (rainbow trout): 110494989
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Entry
110494989 CDS
T07259
Name
(RefSeq) laminin subunit beta-3 isoform X1
KO
K06244
laminin, beta 3
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04382
Cornified envelope formation
omy04510
Focal adhesion
omy04512
ECM-receptor interaction
omy04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
110494989
04518 Integrin signaling
110494989
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
110494989
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
110494989
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Ortholog
Paralog
GFIT
Motif
Pfam:
Laminin_N
EGF_laminin
EGF_LMN_ATRN
LAMB1
hEGF
Wbp11
F5_F8_type_C
CCDC39
CEP135_TSGA10_CC
DUF745
DUF8567
Prefoldin_2
Sec10_N
Motif
Other DBs
NCBI-GeneID:
110494989
NCBI-ProteinID:
XP_036804074
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All DBs
Position
17:50510419..50543166
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AA seq
1152 aa
AA seq
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MWILFHLAALTAVAVTQRDCSRGACYPPMGDLLLGREHQLHASSTCGLTGSEVFCTYFGQ
WRMKCCTCDSRNPSSQLAHTIQNVLSTAGPNRWWQARKDVSPVTLQLDLQNLFQLDTIIL
TFKGPRPSALVVERTLDNGQTWQPSLYMASDCRSAFPGIAMTMPRSLDQTYCYTLPPVPA
NSYQDQTIQFSPLGQFSSISVPNGQKIQEVSGLTGLRVKLTELGAVPRLPGRTPSLFYAL
GEMTVMGTCLCHGHANRCLQDTTAYQMPSTQVSAQCECQHNTAGVNCEQCADLYNDLPWR
SAEEGNTHTCKRCECNNHAQRCRFDPSVYEASGWRSGGVCEGCLHHTTGPKCDRCAPGYQ
LNHRSSIDQPDACIRCHCSAEGAENGGRCDDVTGSCRCKMGYYGLTASNPLGCTKCLCSA
EGSLSSVCDPVSGQCPCRPYHQGLTCELCSRGYWNPSSPHGCEPCRCDPTNSHGDTCDRS
TGQCQCRSGFGGRTCTECPDNTYGDPLIGCRLCQCAAGGMVPGGCDKRTGACRCRIGVIG
TRCDACSRGHVYSFPDCEVCPSCFFSLDSYIQNLTLGLERLSARIPSRPGGSLPTGLGLR
IQALEATLIQIRDSLPLPTPSMRQVNDALFQLRRLRDQLDQVDGDLSPQGRGLELGSQLD
ELQALLGGLGLLYNSKRDALRNPINSNNAGAFSSIKNAYDESTDAAKSVDASGKTVDQSS
AVREDALDLQNQVQPENTRDLEKLNQQLNTKPDLSPTAKQVCGSVRSAPCTPAQCDGELC
PAEGAPPCGRGESCVGVLPLGNRAVRDAEEVKDRLQQLNGKITQAAAQIQKTQDTVNLVR
QSTDDLGNQMRRARDDLEADLQETRYFVKELKDFLSDPSSDPTDISTVSEWILNAKLPLS
LAALKRKLQEIRALAAGLPDSKAVLDQAGPQLDTARRLLQEAQDARDAGLGVKDDVDGLL
EGFTAVEGSFSGLNDKVQDSLDIVEDISNSLAQTKAQLTPAVKALGEVSSLAEGMKPQLV
GLKVLVRSGGLLAQNAEGEAKKANKEADAATRDLASLEKQLEQLRAAERTSGHGDGTGTT
GERLRKLQEEAGSLAQDTGDIMKALAGKADSLRRLQDEVLLKSQRLTGLDGKLRDLLADM
RQKVKILSTCQG
NT seq
3459 nt
NT seq
+upstream
nt +downstream
nt
atgtggattttattccacttagcagccctgacagcagtggctgtgacccagagggactgt
tctcggggggcctgttacccccctatgggagacctgctcctcggtagggaacatcagctt
catgcctcctccacctgcggccttaccggttctgaggtgttttgcacctactttggacag
tggaggatgaagtgctgtacctgtgactccaggaacccatccagtcagttggctcacaca
atccagaacgttctatccaccgctggacccaacaggtggtggcaggccaggaaagacgtg
agtccggtcaccctacagttggacctacagaacctgtttcagctggacaccatcattctg
accttcaagggtccccgtcctagtgcgctggtggtggagaggacgttggataatggtcaa
acctggcaaccgtcactctacatggcctcagactgtcgctcggccttccctggcattgcc
atgactatgccacgctctctggaccagacctactgctacaccctaccccccgtccctgct
aactcttaccaggaccagaccattcagttcagccccttgggccagttctctagcatcagc
gtccccaatgggcagaagattcaagaggtgtcaggattgacaggcctgcgggtgaagttg
actgagctgggtgctgtgccccgcttgcccggccgcaccccctctctgttttatgccctc
ggagagatgacagtgatgggcacctgcctctgccacggccatgccaaccgctgtctgcag
gatactactgcctaccagatgcctagcacacaggttagtgctcagtgtgagtgtcagcac
aacacagcaggtgtaaactgtgagcaatgtgctgatctctacaacgacctgccctggaga
tctgcagaggagggaaacacacacacctgcaaacgttgtgagtgtaacaaccacgcccag
cggtgccgtttcgacccatctgtgtatgaggcgagcggatggaggagtgggggagtgtgt
gagggctgtctgcaccacacaaccgggcccaaatgtgaccgctgtgcccctggataccaa
ctcaaccaccggagcagcatagaccagcctgatgcctgcatacgctgccattgcagtgca
gagggggcggagaatgggggtcggtgtgatgatgtcacagggtcgtgtcgctgcaagatg
ggatactatggcctgactgcctccaaccctctgggctgcacgaagtgcttgtgcagtgca
gagggctccctgtccagtgtgtgtgaccctgtgagcggtcagtgtccctgtcgaccttac
caccaggggctgacttgtgaactctgttcccgtggttactggaacccctcctccccccac
ggctgtgagccctgtcgctgtgaccccaccaactcccatggtgacacctgcgaccggagt
acgggtcagtgtcagtgcaggtcagggttcggaggtcgtacctgtacagaatgtcctgac
aacacttacggagaccccctcattggctgcagactgtgtcagtgtgctgccggaggcatg
gtaccaggaggctgtgataagcgtacaggggcctgccggtgccgcattggtgtcataggt
actcgttgcgatgcctgtagccgtggccatgtttactcctttcccgactgtgaagtctgc
ccctcctgcttcttctctctggactcctacatccagaacctcaccctgggcctagagaga
ctctccgccagaatcccctctcgtcctggcggctcgttgcccaccggtctgggtctccgc
atccaggccttggaggccactctcatccagatacgtgactctctcccactcccaactccc
tctatgagacaagtcaacgacgccctctttcagctacgcagactaagggaccagttagat
caggtggatggggatctgtcaccccaaggcagaggcctcgagctgggctcacagctggac
gagttgcaggctctcctgggcggtctgggtctgctgtacaactccaagagagatgctcta
aggaaccctatcaactccaacaatgcaggggccttctcttctataaagaatgcctatgac
gagtccacggatgcggcgaagagtgtggatgctagtgggaagactgtagatcaatcttca
gcggtcagagaggacgctcttgacctccagaaccaggttcaaccagaaaacaccagagac
ctggagaaactcaaccagcagctgaacaccaaacctgacctctcacccactgccaagcag
gtgtgtggcagtgtgcgctctgccccttgtacccctgcccagtgtgatggtgagctgtgc
cctgcggagggggcgccaccctgtggtcgtggcgagagttgcgttggggttctgcctctg
gggaaccgagctgtgagggatgctgaggaggtaaaggacagactgcagcagctcaatggg
aagatcacacaggctgctgcacagatccagaaaacacaggacacggtcaatctggtcaga
cagtccacggacgatctgggcaatcagatgaggcgggccagggatgacttggaggcagat
ctgcaggagacaagatactttgttaaagagctgaaggacttcctgtcagacccgtcgtca
gacccgacagacatcagcacggtgagtgagtggatcttgaacgccaagctgcctctcagt
ctggcagctctgaagaggaagcttcaggagatcagagccctggcggcaggactcccagac
agcaaagcagtcctggaccaggctggaccacagctcgacactgcccggcggctgctacag
gaggcccaggacgccagggacgctgggctgggtgtgaaggatgatgttgacgggctgctg
gagggcttcacagcagtggagggctccttctctggcctgaacgacaaagtgcaggacagc
ctggacatagtggaagacatcagcaacagtctcgcacagaccaaggcccagttgactccc
gcagtgaaggctctaggggaggtgtcttccctggctgagggaatgaaacctcagctggtg
gggctcaaggtgctggtgcgctctggaggtctgctggcccagaatgctgagggagaggcc
aaaaaggctaacaaggaggcagatgctgcgaccagggacctggcgtccctggagaagcag
ctggagcagctgcgtgctgcagagaggaccagtggtcatggcgatgggacggggacgaca
ggtgagcgtctccggaagctgcaggaggaggctggttctctggcccaggacactggagac
ataatgaaggcactagcaggtaaagcagactctctgcgtagactacaggatgaggtccta
ctgaagtcccagaggctgaccggtctggacggcaaactgcgggacctcctggctgacatg
agacagaaggtcaagatcctctccacctgccagggctga
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