KEGG   Oncorhynchus mykiss (rainbow trout): 110495000
Entry
110495000         CDS       T07259                                 
Symbol
rbm20
Name
(RefSeq) RNA-binding protein 20 isoform X1
  KO
K24052  RNA-binding protein 20
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:omy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:omy03041]
    110495000 (rbm20)
Spliceosome [BR:omy03041]
 Complex A
  Other components
   Complex A specific factors
    110495000 (rbm20)
SSDB
Motif
Pfam: zf-met zf-C2H2_jaz HR1 RRM_1 zf-U1
Other DBs
NCBI-GeneID: 110495000
NCBI-ProteinID: XP_036805145
Ensembl: ENSOMYG00000009882
LinkDB
Position
17:19902768..19979313
AA seq 1287 aa
MQQAWDKALFEAHIEGVKNGQTGEMSGKSQGGYMGTKTSNEHFQSTSLSDGNDNKPQPVG
GVQGQLSGGGGTHQNHQNTQLLLTPASIQLAQLQAQLTFHRLKLAQSAVGGNANSANAAS
ILNQVLANVAMSQPLFNQLRASAMVSNPQAVGGGFHSSALAFQLPPPPPPPPPPPNSALG
TLVGAGFNQNHGNLRLNHYGGGGVSGNQQQQQQANQHGGSDYGKKAGSTYPSDMDRRLQY
GFTGGTSVALSEAGEGQGQYVPIMTQAKSTNQGFQIDFYGQSQQQQAGFGVGNQNDQNKN
PFNEQQWKSPANMSHAGKGLDMVSNTATVWMGTGQPVRAREELYNPEEPTSDPKLNSGGG
GVTSSFGAGMGGTKGFVGYHKQPLQGGEETLSTGGSVQLQPHQLNDFHTVTPSHLPHQCT
ICEKKVYNLKDWDQHVKGKLHLQNRLLYSEGATITAGAVYYGPAGSSEGCLNNVGVNNSM
AYSSTANQDVSSGANLPAGVMRTYPMSGAGFTQLPPGSKTFPPRKSITGRVVHICNLPEG
SCTENDVINLGLPFGKVTNYILMRSTHQAFVEMAYIEAAQAMVQYYQLTPATINDQKLLI
RMSKRYKELQLKKPGKDVDSIIQDINSLRERDEMQETDHYMPERARSRSPISRSLSPRSH
SPSFTSCSSAHSPQGAPCRGGPERGSWTAKHMRKGDEDREREREREEVPWRNGGTVDDDR
LNGRMQDRRNRPYLKPSDRDRISPRSADERGGGRGEGMRGGNRGGDWYPHPRCSPQGMPP
FPSYRNMDEDSYKTQHVYKSEKPLRPQYQRHEEGRVKSKRRDGGDYHRSRHSESDLGEES
LPTRTGEDRRQRGGSPTWGRSKKPTMRHGTEKPEIEITENNGETAEDQRSKEKSVSPQRS
GKHEREKDSEAEEWESGDDTEGECWYPKNMEELVTVDEVGEDDSIIEPDLPELQDDEDVS
ASDLHKDPTEEEEGEAPRSTSTPSPRPCSEKELAQREDTELGRGGGVGGVVDPIPTEQKD
GENCTNPSPTDQSLSQPQQQSLPQPQQQSLPQSQSQSQPQPQPQPQPQPQPQPQPLPQSL
PQSQPQSQPQSQPQSQPLPQSQSQPPIPEQLSSDLDDFPNPEFKAALEETCLEAEVLKSG
APTQELALTNHAGTCESSKTQDVIHKMEDVGREVTVMKPDIQKHKAETPRVIQNSTHPIN
LIDIGAPSPSRGQEKIISEHSIPLGVEFIVPSTGFYCKLCGLFYTSEETAKTSHCRSTVH
YRNLQKYLSQLAKESLLGALTDPSATE
NT seq 3864 nt   +upstreamnt  +downstreamnt
atgcaacaggcctgggataaggctctcttcgaggctcacatcgaaggtgtcaagaacggc
caaactggtgaaatgtcggggaaaagccaaggaggatatatgggaaccaagacgtccaac
gaacacttccagagcaccagcctgtccgacggcaatgataacaagccccagccagtgggt
ggtgtccagggccaactgagtggtgggggtgggacccaccagaaccaccagaacacacag
ctcctcttgacacccgccagtatccagctagcccagctccaggcccagctcaccttccac
cgccttaaactggcccagagtgctgtggggggcaacgcaaactctgcaaacgcagccagc
atcctcaatcaggtccttgccaatgtggccatgtcccagcccctcttcaaccagctccgc
gcctcggccatggtcagtaatccccaagcagttggtggtggtttccactccagtgcccta
gccttccaactgcctccaccaccgccgccaccgccgccaccccccaactctgcccttggg
actttggtaggggccggattcaaccagaatcatggtaatctgaggctgaaccattacgga
ggtgggggtgtttctgggaaccaacagcagcagcaacaggccaaccagcatggtggatca
gactacggtaagaaagctggctcaacatacccttcagatatggataggcgtctccagtat
ggcttcacaggggggacgtcggtggcgttgagtgaagccggagagggacaaggacagtac
gtaccaatcatgactcaggcaaagagtacaaaccaaggctttcagattgacttctatggt
cagagtcaacaacaacaggctgggttcggtgttgggaatcaaaacgatcagaacaagaac
ccttttaatgagcagcagtggaaaagcccagctaacatgagccacgcgggaaaagggttg
gacatggtttccaatactgccacagtatggatggggactgggcagccagtccgtgccaga
gaggaactgtacaatccagaggagccaacctctgaccccaagttaaattccggcggtggg
ggagttacttcctcgttcggagcaggcatgggtggcaccaaggggtttgtgggataccac
aagcagcccctgcaggggggagaggagaccctgtctacaggtggttccgtacaactccaa
cctcaccagctgaatgacttccacaccgtgacgccatcacacctgccccaccagtgcacc
atctgtgagaagaaggtctataacctcaaggactgggaccagcacgtgaaaggtaaacta
cacctgcagaaccgcttgctgtactctgaaggtgctacaatcacagccggagccgtctac
tacggtcctgccgggtcgtctgaaggatgcctaaacaacgtcggagtgaataactccatg
gcttactcttccaccgccaatcaagatgtatcatccggagctaacctaccagctggagta
atgagaacctatcccatgtcaggggctggatttacccaactcccacctgggtcaaagaca
tttccacccaggaaatcaatcacaggacgggtcgtccacatctgcaacctccccgagggc
agctgcacagagaatgatgtcatcaacctgggactgcccttcgggaaagtcaccaactac
atcctcatgcgctctacccaccaggcgtttgtggagatggcgtacattgaggcggcccag
gctatggttcaatactaccagctgactccagccacgatcaacgatcagaaactactgatc
aggatgtccaagagatacaaggagcttcagctcaagaaaccagggaaagacgttgattca
atcatccaggatatcaactccctgagggaaagggacgagatgcaggagactgatcactac
atgccagagagagcgcggtcccgtagtcccatcagccgctctctgagccctcgctcccac
agccccagctttacctcctgtagttcagcccacagcccgcagggggcaccctgccgagga
ggcccggaacggggctcctggaccgccaaacacatgagaaagggggacgaggacagagaa
cgagagagggaaagggaggaggtgccatggaggaacggaggtacagtggatgacgacagg
ctgaacgggaggatgcaggatcgacggaacaggccgtacctgaaaccctccgaccgagac
cggatcagtcccagatcagcggacgaaagaggaggaggaagaggggaggggatgaggggg
gggaacagggggggagactggtacccccacccgcggtgtagccctcaggggatgcccccc
ttcccttcgtacaggaacatggatgaggactcctacaaaacacagcacgtgtataagtca
gagaagcccctgaggccacagtaccagagacatgaggaggggagagtcaagtcaaagagg
agggatggaggggactaccacagatccagacactcagagtcagatctgggagaggagtct
ctacccaccaggacaggagaagacagaagacagagaggaggctccccgacatggggaagg
agcaagaaacccaccatgagacatgggacggagaaaccggaaatagagattactgaaaat
aacggagaaaccgctgaggatcagcgatccaaagagaagtctgtttctcctcaacgaagt
ggcaagcatgagagagaaaaagacagcgaggcggaggagtgggagagtggggacgacaca
gagggtgagtgctggtaccccaagaacatggaggagctggtcacagtggacgaggtagga
gaggacgactccatcatcgaaccggacctccctgagctgcaggatgacgaggacgtgtca
gcctcagacctccacaaggatcctacggaggaggaggagggggaggctccacgatcaacc
tccacccccagtcccaggccctgctctgagaaggagttagcccagagagaggataccgag
ttgggtagaggaggtggggtaggtggggtggtggatcctatacctacagagcagaaagat
ggggagaattgcacaaaccccagccccacagaccagtcactgtcacaaccacagcaacag
tcactgccacagccacagcaacagtcactgccacagtcacagtcacagtcacagccacag
ccacagccacagccacagccacagccacagccacagccacagccactgccacagtcactg
ccacagtcccagccacaatcacagccacagtcacagccacagtcacagccactgccacag
tcacagtcacagccacccatcccagaacagctcagttcagatctggatgatttccccaac
ccggagttcaaggcagccctggaagagacgtgtttggaagctgaagtactgaagagtgga
gcgccgactcaggagctggcgctaaccaatcacgctggcacgtgtgaaagcagcaagacc
caggatgtaatacacaagatggaggacgtggggagggaagtaacggtcatgaagccagac
atacagaagcacaaggctgagactcctagagtcatccagaattcaacacatcctataaac
ctgatagacataggggctccctcaccttctagagggcaggagaagattatcagtgaacac
agcatccctctgggggtggagttcatcgtgcccagtacagggttctactgtaagctgtgt
ggcctgttctacaccagcgaggagacagccaagacctctcactgtcgtagtactgtccac
tacaggaatcttcagaagtacctgtctcagctggcaaaggagagtctacttggtgcacta
actgacccctcagctacagagtga

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