KEGG   Oncorhynchus mykiss (rainbow trout): 110495019
Entry
110495019         CDS       T07259                                 
Name
(RefSeq) zinc finger protein 180
  KO
K09191  general transcription factor IIIA
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:omy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:omy03000]
    110495019
   03021 Transcription machinery [BR:omy03021]
    110495019
Transcription factors [BR:omy03000]
 Eukaryotic type
  Zinc finger
   Cys2His2 others
    110495019
Transcription machinery [BR:omy03021]
 Eukaryotic type
  RNA polymerase III system
   Basal transcription factors
    TFIIIA
     110495019
SSDB
Motif
Pfam: zf-H2C2_2 zf-C2H2 zf-C2H2_4 zf-C2HE ZNF428 zf_UBZ Zn_ribbon_8 C2CH-3rd_BIRD-IDD C1_1 zf-C2H2_CASZ1 zf-C2H2_DHX34 zf-C2H2_FBX41 zf-C2H2_11 Zn_ribbon_SprT DUF7129 zf-C2H2_6 Phage_zn_bind_3 zf-C2H2_15 DUF7565 KDM6_GATAL Teflon_C DUF8106 DUF7128 zf-C2H2_ZN142 zf-C2H2_jaz
Other DBs
NCBI-GeneID: 110495019
NCBI-ProteinID: XP_036804657
LinkDB
Position
17:complement(8029738..8030954)
AA seq 301 aa
MTHQKTHTGERPYHCSQCGTSVSNLAHLKRHQRIINLGEKPYHCSQCDKRFSQAGHLKTH
QRTHTGEKPYHCSQCGKSFGRAGSLKTHQITHTEEKPYHCSQCGDNFTSLYFLKKHQITH
TGEQPYHCSQCGKSFSQAGDLKQHQRTHTGEKPYHCTQCGKRFGWARALKTHQLTHTEEK
PYHCSQCGRSFSQTAHLKKHQLTHTGEKPYNCSQCGKGFSRPAHLTRHQRTHTGEKPYHC
SQCGKSCSQTADLKRHQLTHIGEKPYHCSRCGKSFRHLTTLKMHQMRSFSTAVSVGRVLN
A
NT seq 906 nt   +upstreamnt  +downstreamnt
atgacgcaccagaaaactcacacaggagagaggccttaccactgctcccaatgtgggact
agcgtcagtaatttagcacatctaaagcgacaccagaggataataaacctgggagagaag
ccttaccactgctctcagtgtgataagcgcttcagtcaggcaggtcacctaaagacacac
cagcgaactcacacaggagagaagccttaccactgctctcagtgtgggaagagctttggt
cgggcaggatctctgaagacacaccagattactcacacagaagagaagccttatcactgc
tctcaatgtggggataacttcaccagtttatatttcctaaagaaacaccagataactcac
acaggagagcagccgtaccactgctctcagtgtggaaagagcttcagtcaggcaggagac
ctgaagcaacaccagcgaactcacacaggagagaagccataccactgcactcagtgtggg
aagcggtttggttgggcacgagctctaaagacacaccagctaactcacacagaggagaag
ccttatcactgctctcagtgtgggaggagcttcagtcagacggcacacctgaagaaacac
cagctaactcacacaggagagaagccttacaactgctctcaatgtgggaagggtttcagt
cggccagcacacctaacgagacaccagcgaactcacaccggagagaagccttaccactgc
tctcaatgtgggaagagctgcagtcagacagcagacctaaagaggcaccagctaacgcac
atcggagagaagccttaccactgctctcggtgtgggaagagtttcaggcatttaacaact
ctgaagatgcaccagatgagaagcttttccactgctgttagtgtgggaagagttttaaat
gcataa

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