Oncorhynchus mykiss (rainbow trout): 110495376
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Entry
110495376 CDS
T07259
Name
(RefSeq) protocadherin-17 isoform X1
KO
K16499
protocadherin delta 2
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
omy04515
]
110495376
Cell adhesion molecules [BR:
omy04515
]
Cadherins
Protocadherins
110495376
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
PepSY
Sde0182_C
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
110495376
NCBI-ProteinID:
XP_036807360
UniProt:
A0A8K9VEU2
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Position
18:complement(1004783..1165747)
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AA seq
1175 aa
AA seq
DB search
MYLSILFFLLLWAQALALKNLNYSVNEEQGPGTVIGNIAKDAKLGLGQGGQGKKSNFRVL
ENSAPHLIDVDPESGLLYTKQRIDRETLCRRNPKCQLSMEVFANDKEICMIKVDIVDIND
NSPTFPSDQIDIDISENAAPGTRFPLTSAHDPDAGENGLKTYQITRDDYNLFSLDVKSRG
DGTKFPELVIQRPLDREERNHHTLILTATDGGEYPRSGTMQINVKVIDSNDNSPVFEQPS
YVVEIPENSPPGKVLIDLNATDPDEGSNGQVVYSFSGYAPDRIRELFSIDSRTGVIKIQG
EIDYEENPIIEIDVQAKDLGPNPIPGHCKVTVNVIDRNDNWPSIGFVSVRQGAISEAAPP
GTVIALVRVTDKDSGRNGKLQCRVLGNVPFKLEENYDNFYTVVTDRPLDREQQDEYNVTI
VAKDNGTPPLNSTKSFTVKILDENDNVPRFTKAVYLLQVPENNIPGEYLGSVLALDPDLG
QNGTVFYSILNSNVSGGDVNTFVNVNAANGAIYAVRSFNYEQIKFFDFKVLAKDAGSPHL
ESNTTVRVSVLDVNDNIPVIVLPLLLNDTAEIHVPRNVGVGYVVTTVRAVDNDYGESGRL
TYEISDGNEEHLFEMDPVTGEVRTAHPFWEDVSPTVELIIRVMDHGKPTLTTAARLIVKA
YSGPLPGGEPHINEEHHNWDTSLPLIVTLSIISMMLLAAMVTIAVKCKRENKEIRTYNCR
IAEYSHPQLGKGKKKKINKNDIMLVQSEVEERDAMNVMNVVSSPSLATSPMYFDYQTRLP
LSSPRSEVMYLKPTANNLSVPQGQGHGVGCHTSFTGPVTNTTDTPSSRMSIIQTDNFPAE
PNYMGSRQQFVQSSSTFKDPERASLRDSGHGDSDQADSDQDTNKGSCCDMSAKEALKMKA
TGVKPPPLEQEEDCVNCTEECRVLGHSDRCWMPQFPAGGAGGGGANQAEGVDYRNNLFVP
AGMEAAMETTEAYETVNPNGKKTFCTFGKERRDHTILVANVKPYLKAKRALSPLLQEVPS
ASNSPTKGCSSSNNSPCASSTKSPADGAETKPSPSHYCSGPPDGQYHSPNKQSRDPGLPH
HYGPRGPGLPPGHPAYPSLSCDPVAKVLAEARSRISQEAGVGTEMDCVLEMDGGIHGGGE
LGRDGVDADQVVRDIDKLLQDCRGSETATGTLRRK
NT seq
3528 nt
NT seq
+upstream
nt +downstream
nt
atgtatctttccattttatttttccttctcctttgggctcaagccctggctttgaaaaac
ttgaattattccgttaacgaagaacaaggaccggggacggttataggcaacatcgctaaa
gatgctaaactcggtctcgggcaaggaggacaagggaaaaaatcaaacttcagagttctg
gagaattcagcaccgcatctcatcgatgtggaccctgagagcgggctgctctataccaag
cagcgcatcgacagggaaacactgtgtcggcggaaccccaaatgtcagctctccatggag
gtatttgctaacgacaaagagatctgcatgattaaggtagatatagtcgacatcaacgac
aactcgcccacgttcccttccgatcagattgatattgacatttctgagaacgctgccccg
ggcacccgcttcccgcttactagcgctcatgacccggacgctggggagaacgggctaaaa
acctaccagatcacacgagacgactacaatctgttttctctggatgtaaaatcccgcggg
gacggaactaaatttcccgagttagttattcaacggccgttagaccgggaggaacgtaac
catcacaccctcatcctaaccgctacggacggcggggagtatcccagatcaggaaccatg
cagattaatgtaaaagttattgactctaacgataacagccctgtgtttgaacagccctct
tatgttgtagaaatcccagaaaactccccacctgggaaagtattgatagatttaaatgcc
acagacccagacgagggttccaatggtcaggtggtgtattcattcagcggctacgccccg
gatagaatcagagaactcttctctatagattctagaacgggagtcataaaaatccaagga
gagattgactacgaggagaaccctattatagaaatagatgttcaggctaaggatttaggc
cctaaccccatcccaggccactgtaaagtaactgtgaatgtgatcgacaggaatgacaac
tggccctccatagggtttgtgtctgtgaggcagggggccattagcgaggcagccccacca
ggcacggtcatcgccctggtcagagtcacggataaagactctgggaggaacgggaagctc
cagtgtagagtcctggggaacgttccgtttaaactagaggagaactacgacaacttctac
accgtggtgacggacaggcctctggacagagaacagcaggacgagtacaacgtcaccatc
gtcgccaaggacaacggcacgccgccccttaactccaccaagtcgttcacggtgaagatt
ctcgacgagaacgataacgttccgcgtttcaccaaagctgtgtatctgctccaggtgccg
gagaacaacatccccggggagtatctgggttccgtcctcgctctagacccggacctgggc
cagaacggaaccgtgttctactccatcctcaactccaacgtgagcggaggagacgtcaac
acctttgtgaacgtgaacgcggccaacggggcaatctacgccgtgaggtcattcaactac
gaacaaatcaaattctttgattttaaggtcttggcgaaggatgctgggtctcctcacctg
gagagcaacaccacggtcagggtcagcgtcttagacgttaacgacaatatccccgtcatc
gttctcccgctgctcctgaacgacacggcggagatccacgtgccacggaacgtcggcgta
ggttacgtcgtcaccacggtgagggcggtcgacaacgattacggcgagagcgggcggttg
acctacgagatctccgacggtaacgaggagcatctgttcgagatggacccggtgacgggc
gaggtacggaccgcccaccccttctgggaggacgtcagccccacggtggagctgatcatc
agggtgatggaccacgggaagcccaccctcaccaccgccgcacgcctcatcgtcaaggcc
tacagcggaccgctgccgggcggcgagccccacatcaacgaagagcatcacaactgggac
acctcgctgcctctcatcgtcaccttatccatcatctctatgatgctgctggctgccatg
gtaaccatcgccgtgaagtgcaaacgggagaacaaggagatcaggacgtacaactgccgc
atcgcggagtactctcacccgcagctgggcaaaggcaagaagaagaagatcaacaagaat
gacatcatgctagttcagagcgaggtggaggaacgggacgccatgaacgtcatgaacgtg
gtgagctccccgtcgctcgccacctcccccatgtatttcgattaccagacgcggctgccg
ctgagctcgcccaggtcggaggtcatgtacctcaagcccacggccaacaacctgtcggtg
ccccagggacagggccacggcgtcggctgtcacacgtccttcactggcccggtgactaac
accacagatacccccagtagcaggatgtccattatacagacagacaattttcccgctgag
cccaattacatgggcagcaggcagcagtttgttcaaagcagctcgacattcaaggaccca
gagcgagccagccttagagacagtggtcatggcgatagtgatcaggccgatagcgaccag
gacactaataaaggctcctgctgcgacatgtcggccaaagaggctctgaagatgaaggct
acgggcgttaaaccacctcctctggaacaggaagaagactgtgttaattgcacagaggag
tgcagagtcctcggccactccgaccgctgctggatgccacagttcccggcgggaggggcg
ggagggggaggagccaaccaggcagagggcgtggactaccgcaacaacctgttcgtcccc
gcggggatggaggctgccatggagaccacagaagcctacgagaccgtcaaccccaacggg
aagaaaaccttctgcaccttcgggaaggagcgtcgggaccacaccattttagtggctaac
gtcaagccttacctgaaggccaagagagccttgtctccgcttctccaggaggtcccctca
gcctccaactcccccactaaaggctgctcctcctctaacaactccccctgcgcctcctcc
actaaatcccccgcagacggagccgagaccaaaccctcccccagccactattgctctggc
ccccccgacgggcagtaccactcccccaacaaacagagcagagacccaggtctcccccat
cactacggcccccgcggcccaggactacccccgggacacccagcctacccttctctttcc
tgcgaccctgtggccaaggttctagcggaggcccggtcccgaatcagccaggaggctggg
gtgggaacagagatggactgtgttctggaaatggacggggggatccacggagggggggag
ctggggcgggacggggtcgatgcagaccaggtggtcagagacatcgacaaactgctgcag
gactgcagaggcagcgagacagccaccggcactctcagaagaaagtga
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