Oncorhynchus mykiss (rainbow trout): 110495377
Help
Entry
110495377 CDS
T07259
Name
(RefSeq) protocadherin-20
KO
K16498
protocadherin delta 1
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
110495377
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
omy01009
]
110495377
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
omy04515
]
110495377
Protein phosphatases and associated proteins [BR:
omy01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
110495377
Cell adhesion molecules [BR:
omy04515
]
Cadherins
Protocadherins
110495377
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
Cadherin_2
Adeno_E3_CR2
Motif
Other DBs
NCBI-GeneID:
110495377
NCBI-ProteinID:
XP_036807371
Ensembl:
ENSOMYG00000008894
LinkDB
All DBs
Position
18:complement(2526726..2539644)
Genome browser
AA seq
894 aa
AA seq
DB search
MFNKTGPGLSSRGVLWGLCILLLYTSPLCCFANFSQAKELVYKIKEGLPSGTLIGSVGSD
LHLDLSLDPHVLFNLPQKKPSDQYVTLNSTTGQLFTSGNEIDRETLCPDSSEYKQGCVLS
LDVFVLPQQYFQLVKVKILVEDVNDNRPRFPTGEIRVSVPENTQVNARFAVEQSATDPDL
GFHGVQTYWLVNDFGVFTLDVEENEGGELTPFLIVTDELDRERQEEYVTDIIAEDGGLPP
LLGTATLRIIITDVNDNCPQFTESQVNVTLYGNTTKGEHLSRLHAFDPDQGANAVISYAY
SDRVPREARALFHLDRITGVIKLAGQINTATGKFYKLTVLANGPGCVPAVATMTVHVIRV
ASGPPVITPRYIAAEKDGVVTMKESEPPFSPIAFFTVSNTDQRGQGTECLLEGSGPFRLT
PYKRLKNEYLLETTAPLDHERRQDYELTVVLRNPRGLAIKTFVKILVLDENDNAPVFKQS
LYEVSVEENNPPNSFLTQLQATDQDSEARGEVIYTLGSDAPSIFLLERLTGVLTVSTSLD
REEKQTYRFMVRAVDRGTPRRESIATVVITVLDRNDNSPRFINKDFTFFVPENFPGFGEI
GVLSVTDADAGENGWVALSIVNGSDIFVIDAGRGALRARTPLDREQQGTYYLWIEAVDGG
EPSLSCLTVVTVLLLDVNDNPPVVLFPQSNQSYMLVLPSTLPGTSITEVYAVDKDTGMNA
VIAYSIIKRKGGEPGSFDIDPETGNITLKRELSDRGLYSLLVKVSDHGQPEPLHSTVLVN
LFVNETVSNESYIQSLLTGEEAEIQMEEKQWYVGKLTERPGRADLFPCQPLLIALSVTCL
GLFCIVVTLTAYICCRKLKKWRKRQMKRLEVEMPLKTNGDVRDADRKRTEISNI
NT seq
2685 nt
NT seq
+upstream
nt +downstream
nt
atgttcaacaaaacaggacccggacttagctcgagaggagtactgtggggtttgtgtata
ctcctcctttacaccagccccctctgctgttttgctaatttcagccaagcgaaagagctg
gtctataagataaaagaaggattaccgtcagggacactcatcggatccgtgggctccgac
ttacacttggatttatccctcgatccccatgttttattcaatctgccccagaagaagccc
agtgatcagtatgtcactctgaacagcactacgggacagctgtttacgtctgggaatgag
atcgacagggagacgctctgccccgactcctcggagtacaagcagggctgcgtcctctcc
ctggatgtgttcgttctaccccagcagtatttccagctggttaaggtcaaaatcttggtc
gaggacgttaacgataatcgtccgcgcttcccgacgggcgagattagggtttcggtcccg
gagaacacccaggtcaacgcgaggttcgcggtggagcagtcagcgacggaccccgatctg
gggtttcacggggtccagacttactggctggtcaacgactttggggtgttcactctggac
gtagaggagaacgaggggggtgagctgacacccttcctcatcgtgaccgacgagctggac
cgggaacgacaggaggaatacgtaacggatattatagcagaggacggtgggttaccacct
ctccttggcaccgccacgttgaggattataatcactgatgtcaacgataactgtcctcag
ttcacagagtcacaggtcaacgtgacgctctacgggaatacgactaaaggagagcacctg
tccaggttacacgccttcgaccccgaccagggcgccaacgccgtgatcagctatgcgtac
agcgaccgcgttccccgggaggctagagccctgttccatctggaccggattaccggggtg
atcaaactggccggtcagatcaacaccgcaaccgggaagttctacaaactcactgtcctc
gccaacgggcccggttgcgtccctgccgtcgccacgatgacggtgcacgtgatccgggta
gcttccggtccgcctgttattacgccgcgctacatcgcggcggagaaagacggcgtggtc
acgatgaaggagtccgaaccgccgttttccccaatcgcgtttttcaccgtgtcgaacacg
gaccagagaggacaagggacggaatgtctacttgaaggatccggcccgttccgactgaca
ccttacaaacggttgaagaacgagtatctgttagagacgacggcgccgctggaccacgag
cggaggcaggactacgagctgaccgtagtgctcaggaaccccagaggtctcgccattaag
accttcgttaagatcctggttctggatgagaacgacaacgcgccggtcttcaaacagtct
ctgtatgaggtctccgtggaggagaataaccctcccaacagcttcctgacccagctccag
gccacagaccaggacagtgaggccagaggagaggtcatctacacgctggggtcagacgct
ccctccattttcctcctggagaggctgaccggcgtgctgaccgtgtccacgtctctggac
cgagaagagaagcagacctacaggttcatggttcgggcggtggaccgagggacccccagg
agagagtctatagctacagtggtcatcactgtgctggaccgcaatgacaacagcccgcgc
ttcatcaataaagacttcacgttctttgtgccggagaatttcccgggttttggcgagatc
ggcgtcctctcggtaacagacgcggacgcaggcgagaacggctgggtggccctctccatc
gtcaacggcagcgacatcttcgtgatcgacgcggggcgtggcgctctcagggcccgtacc
cctctggaccgggagcaacaggggacgtactacctctggatcgaggcagtcgacggaggg
gaaccctctctctcctgcctcaccgtggttaccgtcctcctccttgacgtaaacgacaac
cctcccgtcgtcttgttcccccagtctaaccagtcctacatgctggtgttgcctagcacc
ctaccagggacctccatcacagaggtttacgccgtggataaagacacgggaatgaacgcc
gttatcgcctacagcatcatcaagaggaagggtggcgagccggggtcgtttgatatcgac
ccggagacagggaacatcacgttgaagagagaactgagtgaccgcggtctctacagtcta
ctggttaaagtctcggaccacggtcaacccgaacctctccactccacggtcctggtcaac
cttttcgtcaacgagacggtctcaaacgagagctacatccagagtcttctcaccggggag
gaggctgagatccagatggaggagaagcagtggtacgtgggtaaactgacagagaggccc
ggcagggcggacctgttcccctgtcagcctctactcatagctctgtcagtgacctgtctg
ggactattctgcatcgtcgtcacgttgactgcttatatatgctgcaggaaactgaagaaa
tggaggaaacgtcaaatgaaaagactagaggttgaaatgcctttgaagacgaacggtgac
gtgcgcgacgcagatagaaagcggacggaaatctcaaacatttga
DBGET
integrated database retrieval system