Oncorhynchus mykiss (rainbow trout): 110495512
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Entry
110495512 CDS
T07259
Name
(RefSeq) POU domain, class 2, transcription factor 1 isoform X1
KO
K09364
POU domain transcription factor, class 2
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
110495512
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omy03000
]
110495512
03021 Transcription machinery [BR:
omy03021
]
110495512
Transcription factors [BR:
omy03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
110495512
Transcription machinery [BR:
omy03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
110495512
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pou
POU2F1_C
Homeodomain
Motif
Other DBs
NCBI-GeneID:
110495512
NCBI-ProteinID:
XP_036807222
LinkDB
All DBs
Position
18:complement(12898791..12910954)
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AA seq
631 aa
AA seq
DB search
MADGGVMSQYESSGPDAIINLSVSSKSTMENGDMVKGVLTNGRDSQKQTVMSLTNAQSQA
LLQQLTLSPAQQQLFLQQAQAQLLAAAVQQHSASQAQNSSTTGAAISASAATPITTQLPL
SQPIHITPLQQQGLQQFVLVQPGHSMATQLQPQFFISQTPQGQPSMFQYHNLLQAQNLLT
QLPQSQANLLQTPTITIAPQPAAPTRTVTATPGQLLIHSQTPPPKGLGTPTLEDANDLEE
LEIFSKAFKQRRIRLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNMCKLKPLLE
KWLNDAENVSSESSPSLSPLGSGHGSPSLASDLNSRRRKKRTSIDTNIRVALEKSFLQQN
QKPSSDEISLIADQLNMEKEVIRVWFCNRRQKEKRINPPSSSAFQKSIFSSPTTASLVNT
VPQTTVTVTPSLPVTSFSLTDRTLVPATGNTASVISSTPTVPSMSLTPSSSVTTMSQPAV
TMTQAGQMLYSNGGGLAAMAAAAAGISPGLMPSSQFNTGGALLNLTTAGFGGALATIQGV
LSALASSGSFPITTLDGNGNLLFANTSMSGSAPSMVNTPLFLNPQSLSLLGSNPVSFIPA
SALSLQLTAGTNTITTATTPVNTIVRASKAQ
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atggctgacggaggagtaatgagccaatatgaaagttcaggaccagacgcgataatcaac
ctgtcagtgtccagtaaaagcaccatggagaacggggacatggtcaaaggcgtgctgacc
aatggccgggactctcagaagcagacggtcatgtccctcaccaacgcacagtcacaggct
ctgctgcaacagttgaccttgtctccagcgcagcagcagctgtttctccagcaggctcag
gcccagctccttgcagcagccgttcagcagcactccgccagccaggcccagaacagcagc
accacgggggccgccatctctgcctccgcagccacccccatcaccacccaactaccactg
tcccagcctatacacatcactcctctccagcagcagggcctgcagcagtttgtgttggtc
cagccaggtcattccatggccacccagctacagcctcagttcttcatctcccagactcca
cagggacagcccagtatgtttcagtatcataatcttttgcaagcccaaaatcttctcact
caactacctcagagccaagccaacctcctacagactccaactatcacaattgccccacag
ccggccgctcccacgcggaccgtaactgccacccctggccagctcctcatccacagccag
accccgccccctaagggtctgggcacgcccactctggaggatgccaatgatctggaggag
ctggagattttctccaaggccttcaaacagaggaggatcagactgggctttacacagggt
gacgtggggctggccatggggaagctgtatggtaatgacttcagccagaccaccatctcc
cgctttgaagcactcaacctgagcttcaagaacatgtgtaagctgaaaccgctgctggag
aagtggctcaacgacgcagagaatgtgagctcagagtccagccccagcctcagtcccctg
ggctctggtcacgggtcacccagcctggcgtctgacctcaatagccggcgccgcaagaag
aggaccagcatcgacaccaacatccgtgtggccctggagaagagcttcctccagcaaaac
cagaagccgtcgtcagacgagatctccctgatagcagaccagctgaacatggagaaggag
gtgatccgggtgtggttctgtaaccgccggcagaaggagaagaggatcaaccctcccagc
agctcagctttccagaagtccatcttctcgtcccctactactgccagcctggtgaacact
gtaccccagaccactgtgactgtcaccccctctctgcctgtcaccagcttcagcctcaca
gacaggaccctggtgccagccaccggcaacacagcatccgtcatctccagcacccctaca
gtcccctctatgtccctcacaccctcctcctccgtgacaaccatgtcacagccagccgtt
accatgacgcaggcggggcaaatgctctacagcaacggcgggggtctggctgcaatggcg
gctgcagcggcgggaatcagcccgggtctcatgccctcgtcgcagttcaacacagggggg
gccttactgaacctaactactgcaggttttggaggagcactagccaccatccaaggtgtg
ttgagtgctctggcctccagcgggtccttccccatcaccaccctggacgggaatgggaac
ctgctatttgccaacaccagcatgtctggctccgcccctagcatggtgaacacgccactc
ttcctgaacccccagagcctgtccttattgggtagtaaccctgtcagctttatccctgcc
agtgccctcagcctgcaactcaccgctggcaccaacaccatcaccacggcaactacacca
gtcaacaccatcgtcagagcctctaaggcccaatga
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