KEGG   Oncorhynchus mykiss (rainbow trout): 110495535
Entry
110495535         CDS       T07259                                 
Name
(RefSeq) tubulin alpha chain isoform X1
  KO
K07374  tubulin alpha
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Pathway
omy04145  Phagosome
omy04210  Apoptosis
omy04517  IgSF CAM signaling
omy04530  Tight junction
omy04540  Gap junction
omy04814  Motor proteins
omy05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:omy00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    110495535
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    110495535
  09143 Cell growth and death
   04210 Apoptosis
    110495535
  09144 Cellular community - eukaryotes
   04530 Tight junction
    110495535
   04540 Gap junction
    110495535
  09142 Cell motility
   04814 Motor proteins
    110495535
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    110495535
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:omy03019]
    110495535
   03036 Chromosome and associated proteins [BR:omy03036]
    110495535
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:omy04812]
    110495535
   04147 Exosome [BR:omy04147]
    110495535
Messenger RNA biogenesis [BR:omy03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     110495535
Chromosome and associated proteins [BR:omy03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     110495535
Cytoskeleton proteins [BR:omy04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    110495535
Exosome [BR:omy04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   110495535
  Exosomal proteins of other body fluids (saliva and urine)
   110495535
  Exosomal proteins of colorectal cancer cells
   110495535
SSDB
Motif
Pfam: Tubulin Tubulin_C Tubulin_3 DUF7281
Other DBs
NCBI-GeneID: 110495535
NCBI-ProteinID: XP_036838112
Ensembl: ENSOMYG00000007598
LinkDB
Position
7:complement(6207401..6220777)
AA seq 449 aa
MRECISVHVGQAGVQMGNTCWELYCLEHGIQPDGTMPNNKAVGSTDDSFTTFFSATGIGK
YVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNYARGHYTIGKEIIDQVLD
RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDFGKKSKLEFAIYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPSYTNLNRLISQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNSCFEPAN
QMVKCDPRHGKYMACCLLYRGDVVPKDVNVAIGNIKTKRSIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDMAALEKDYEEVGIDSFEEDEEGEEY
NT seq 1350 nt   +upstreamnt  +downstreamnt
atgcgtgagtgtatctctgtgcatgtgggtcaggctggagtccagatgggcaacacctgt
tgggagctgtactgcctggagcacgggatccagccggacggcaccatgcctaacaacaag
gcggtcggtagcactgacgactccttcaccacgttcttcagcgccacgggcatcgggaaa
tacgtaccccgcgccatctttgtagacctggagcccactgtcattgatgaggtgcggaca
ggtacctaccgccagctgtttcaccccgagcagctgatctcagggaaggaggacgcagcc
aataactatgcccgtggccactacactatcggcaaggagatcattgaccaagtgctggac
aggatccgtaaactggctgaccagtgtacggggctccaaggtttcttggtcttccacagc
ttcggaggaggtaccggttctggtttcacctccctgctcatggagcgtctctcagtcgac
ttcgggaagaagtccaagctggagtttgccatataccctgctccccaggtgtccacagct
gtggtggagccctacaactccatcctgaccacccacaccaccctagagcactctgactgt
gccttcatggtcgacaatgaggccatctacgacatctgccgtagaaacctggacattgag
cgcccctcttacaccaacctcaacaggctcatcagccagattgtctcctccatcacagcc
tctctccgcttcgatggtgcccttaacgtggacctgacagagtttcagaccaacctggtg
ccttacccccgcatccactttcccctggccacctatgcccctgtcatctcagccgagaag
gcctaccacgagcagctttctgtggctgagatcaccaactcctgcttcgagcccgccaac
cagatggtaaagtgcgaccctcgccacggtaagtacatggcgtgctgtctgctgtaccgc
ggagacgtggtgcccaaggatgtcaacgtggccatcggcaacatcaagacaaagcgaagc
atccagttcgtggactggtgccctacaggtttcaaagtgggcatcaactaccagccaccc
actgtggtgccagggggtgacctggccaaggtccagagagctgtgtgcatgttgagcaac
accacagccatcgctgaggcctgggcgcgtctcgaccacaagtttgacctgatgtatgcc
aagcgggcattcgtgcactggtacgtgggtgagggcatggaggagggagagttctctgag
gccagggaagacatggctgccctggagaaggactatgaagaggttggaatcgactcattt
gaggaggacgaggagggagaggagtattag

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