Oncorhynchus mykiss (rainbow trout): 110495638
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Entry
110495638 CDS
T07259
Name
(RefSeq) histone deacetylase complex subunit SAP18
KO
K14324
histone deacetylase complex subunit SAP18
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03013
Nucleocytoplasmic transport
omy03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110495638
03015 mRNA surveillance pathway
110495638
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omy03019
]
110495638
03036 Chromosome and associated proteins [BR:
omy03036
]
110495638
Messenger RNA biogenesis [BR:
omy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
110495638
Chromosome and associated proteins [BR:
omy03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
110495638
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAP18
Motif
Other DBs
NCBI-GeneID:
110495638
NCBI-ProteinID:
XP_021426650
Ensembl:
ENSOMYG00000009047
UniProt:
A0A060XUF0
LinkDB
All DBs
Position
18:complement(15705622..15710368)
Genome browser
AA seq
156 aa
AA seq
DB search
MALESRITQEEIRKIPEKPIDREKTCPLLLRVFTTNGGRHHRGDEFARGQVPSSELQIYT
WMDASLKELTSLVKEVYPEARKKGTHFGFAIVYPEPKRNGYRVKDIGNTVSGRKGENDSM
TLQSQRFQIGDYLDIAITPPNRAPPLNPRMGMGRPF
NT seq
471 nt
NT seq
+upstream
nt +downstream
nt
atggctcttgaatcaagaatcacacaagaagagattcgaaaaatccccgaaaagcctatc
gaccgagaaaagacgtgtcctcttctgctgcgggtatttacgaccaacggtggcaggcat
cacagaggggacgaattcgcacgaggacaagtcccttcaagtgagctgcaaatctacaca
tggatggatgcctcgctaaaagagctgaccagccttgtgaaggaggtgtaccctgaagct
cggaagaaaggaacacactttggtttcgccatcgtttatcctgagcccaaaagaaatggc
tacagagtgaaagacatcggcaacactgtgtcaggcaggaagggggaaaatgactccatg
acgctacagtcgcagcgcttccagataggagactacctggacatagccatcacaccaccc
aacagagcccccccacttaacccacgcatgggcatggggaggcccttctga
DBGET
integrated database retrieval system
