Oncorhynchus mykiss (rainbow trout): 110495671
Help
Entry
110495671 CDS
T07259
Name
(RefSeq) probable ubiquitin carboxyl-terminal hydrolase FAF-X isoform X1
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
omy01002
]
110495671
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
omy04121
]
110495671
Enzymes [BR:
omy01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
110495671
Peptidases and inhibitors [BR:
omy01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
110495671
Ubiquitin system [BR:
omy04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
110495671
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARM_UBP24_USP9X-Y
DUF3517
UCH
UCH_UBL1
UCH_1
FAST_1
Vps23_core
Motif
Other DBs
NCBI-GeneID:
110495671
NCBI-ProteinID:
XP_021426704
Ensembl:
ENSOMYG00000018232
LinkDB
All DBs
Position
18:complement(16386046..16411509)
Genome browser
AA seq
2608 aa
AA seq
DB search
MTVTTRGSPVGGNDSQGQAPADSQSQPPPTQAQLQTVSPNPSTTEPSPVSPPAAEEEQGQ
GDSAPALEEEEPAFPHTDLAKLDDMINRPRWVVPVLPKGELEVLLEAAIDLCKKGLDVKC
EACQRFFRDGLTISFTKILTDEAVSGWKFEIHRCIITNTHRLVELCVTKLPQDWFPLLEL
LATATNPHCKFHIYNGTRPSETIPAGATLADDELFARPPDPRSPKGWLVDLINKFGTLNG
FQTLHDRFMSGQALNVQIIAALIKPFGQCYEFLTLHTVKKYFLPVIEMVPQFLENLTDEE
LKKEAKNEAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRLKMILRLLQISSFNGKMN
ALNEVNKVISSVSYYTHRHGNPEEEEWLTAERMAEWIQQNHILSIVLRDSLHQPQYVEKL
EKILRFVIKEKALTMQDLDNIWAAQAGKHEAIVKNVHDLLAKLAWDFSPEQLDHLFDCFK
ESWTNASKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAHSDDVPVDIMDQALSAHI
KILDYSCSQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREICSLFGEAPQNLSQTQRS
PHVFYRHDLINQLQHNHALVTLVAENLSAYMETMRPFSKAEHADFDPQTVRVGSRYSHVQ
EVQERLNFLRFLLKDGQLWLCAPQAKQIWRCLAESAVFLCDREACFKWYSKLMGDEPDLD
PDINKDFFENNVLQLDPSLLTENGMKCFERFFKAVNCREGKLVAKRRAYMMDDLELIGLD
YLWRVVIQGTDDIASRAIDLLKEIYTNLGPKLQVNQVEIHEDFIQLCFDRLKASYDTLCV
LDGDKDSINCARQEAIRMVRVLTVLKEYINECDSDYHEERSILPMSRAFRGKHITLIVRF
PNQGRQVDDLDIWSHTNDTIGSVRRGILTRIKANATHTKIELFIGGEVVDPADDRKLIGQ
LNLKDKALITAKLTQVSATVPSSPDSSSDSSTGSPSNHGNHFSEGPNPEVEGCLPGVIMS
LHLRYISFLWQVADLGCTLNMPLLRDGARLLMKLMPPDNGTVENLRAICLDHAKLGENSL
SPTLDSRFFGPSPSQVLYLTEVVYALVMPASGTLGEDASDFQYNFLKSGGLPLVLSMLTR
NNFLPSADMETRRGAYLNALKIAKLLLTAVGFGHVKAVAEACQPVVEGTSPASPAACYAN
AVEAKINQATHDQALVLQSALQNIPNPASECMLRNVAIRLAQQISDESLPPNSQNFFQAS
KYIPDLCVIRAVQKIVWASGCGTVQLVFSSNEEISQIYEKTNAGKEPDGEDEMVCCEALE
IMTLCFALLPTALDTLSKEKAWQTYIIDLLLHCHSKSVRQMAQEQFFLMATRCCMGHRPL
LFFITLLFTVLGSTAKERAKHAGDYFTLLRHLLNYAYNSNINLPNAEALLNNEIDWLKKI
RDEVKRTGETGVEETILEGHLGVTKELLAFQTPEKKYYIGCENGGANLIKELIDDFIFPA
SNVYLQYVKSGEFPTEQAIPVCSSPASINAGFELLVALPVGCVRNLKQIVDTLTDMYYLG
CEALTEWEYLPPVGPRPTKGFVGLKNAGATCYMNSVIQQLYMIPPIRNGVLAVEGTGTDV
DDELSGDEKQENETNADGTVRDEVFPYQHQFDDKPSLSKSEDRKEYNIGVLRHLQVIFGH
LASSRLQYYVPRGFWKQFRLWGEPVNLREQHDALEFFNSLVDSLDEALKAMGHSSMLSKV
LGGSFADQKICRDCPHRYECEESFTTLNVDIRNHQNLLDSMEQYVKGDLLEGANAYHCEK
CNKKVDTVKRLLIKKLPPVLAIQLKRFDYDWERECAIKFNDYFEFPRELDMEPYTVAGVA
KLEGDDGNPESQMIMQNEPSEPDPPGCSSKYRLVGVLVHSGQASGGHYYSYISQRDGGTG
GSADSGQKERWYKFDDGDVTECKMDDDEEMKSQCFGGEYMGEVFDHMMKKMSYRRQKRWW
NAYILFYERMDAAGGGAAVEADGELARCISELTVSPTTPRQVTMPGAIECSVRKQNVQFM
HSRMQYSLEYFQFVKKLLTCNSVYLNPPPGQDHLLPEAEEIAMISIQLAARFLFSTGFHT
KKVVRGPAGDWYDALCILLRHSKNVRCWFAHNVLFAYPTRFSEYLLECPSAEVRGAFAKL
IVFIAHFSLADGPCPAPASSPDGSTQGCDNLSLSDHLLRAVLNLLRREVSEHGRHLQQFF
NLFVMYANLGLAEKTQLLKLSVPATFMLVALDEGPGPPIKYQYAELTKLYAVVSQLLRCC
DVSTRMQSSINGNPSLANPYGDANLTTPIMPLQQLVSEILFVRTSYVKKIIEDCSNSEET
VKLLRFSCWENPQFSSTVLSELLWQVAYSYTYELRPYLDLLLQILLIEDSWQTHRIHNVL
KGIPDDRDGLFDTIQRSKNHYQKRAYQCIKCMVALFSNCTVAYQILQSNGDLKRKWTWAV
EWLGDELERRPYTGNPQYTYNNWSPPVQSNETSNGYFLERSHSARMTLAKACELCPEEVR
KEPDDQEATEDHDSSPPEDTALYPHNPAPATQFQQQNNHPHAQPYTGPAAQHMNTPQRPP
QRAQESWESTTEEVGPVAPPPAVQSTKE
NT seq
7827 nt
NT seq
+upstream
nt +downstream
nt
atgacggtcaccacccgtggctcccccgtggggggcaatgatagccagggccaggcaccc
gctgattctcagagccagcccccacccacacaggcccagttgcagacggtgtcccccaac
ccgtcgaccacagagccgtctcctgtgagcccaccggcggcggaggaggagcagggccaa
ggagactctgcccctgctctggaggaggaggagcctgccttccctcacactgacctggcc
aagctggacgacatgatcaacaggccccgatgggtagtcccagtcctgccaaagggggaa
ttagaagttctacttgaagctgctatagacttatgtaaaaaagggcttgatgtgaagtgt
gaggcgtgccagaggtttttcagggacggcctgaccatctccttcactaagatcctcaca
gacgaggctgtcagcgggtggaagtttgagatccataggtgtatcatcaccaacacacac
cggctggtggagctgtgtgtgaccaagcttcctcaggactggttccccttactggagcta
ctagccacagccaccaacccccactgcaagttccacatctacaacggcacgcggccctct
gagaccatccccgccggggccacgctggccgacgacgagctcttcgcccgcccacccgac
cctcgctcacccaagggctggttggtggacctgattaataagtttggcacgctgaacggg
tttcagactctacacgaccgcttcatgagcggacaggcactcaacgtgcagatcatcgct
gccctcatcaagccgttcggccagtgctatgagttcctgaccttgcacacagtgaagaag
tacttcctgccagtgatcgagatggttcctcagttcctggagaatctgacggacgaggag
ctgaagaaggaggccaagaacgaggccaagaacgatgccttgtccatgatcatcaagtcc
ctgaagaacctggcctccagggtgcctggtcaggaggagaccgtcaagaacttggagata
tttaggttgaaaatgatccttaggttattgcagatttcctcgttcaacggcaagatgaac
gctctgaatgaggtcaacaaggtcatctccagcgtgtcctactatacgcatcggcatggc
aaccccgaggaggaggagtggctgacggcagaacgcatggcggagtggatccagcagaac
cacatcctgtccatcgtgctgagggacagcctccaccagcctcagtacgtagagaaacta
gagaagatactccgcttcgtcatcaaagagaaagccctcaccatgcaggacctggacaac
atctgggcagcgcaggctggtaagcacgaagccatagtgaagaacgtccatgaccttctg
gccaaactggcctgggacttctctccagagcagctcgaccatctctttgattgcttcaag
gagagttggacgaatgcgagtaagaagcagcgtgagaagctgctggagctgatccgtcgt
ctggcggaggacgataaggatggagtgatggcccacaaggtgctcaacctgctgtggaac
ctggctcacagtgacgacgtccccgtggacatcatggaccaggccctcagcgcacacatc
aagatactggactacagctgctctcaggacagagacacccagaagatccagtggatagac
cgcttcatcgaggagctgcgcaccaacgacaagtgggtcataccagccctgaagcagatc
agagagatctgcagcctgtttggggaagctcctcagaacctcagtcagacccagaggagt
cctcatgtgttctatcgtcatgacctgatcaaccagctgcagcacaaccatgccctggtc
actctggtggctgagaacctgtctgcctacatggagaccatgagaccgttctccaaagct
gaacacgcagactttgaccctcagacggtcagagtgggaagtcgctacagtcatgttcag
gaggtccaggagaggctcaacttcctgaggttcctgttgaaggacggacagttgtggcta
tgtgctcctcaggccaagcagatctggaggtgtctggctgagagcgctgtcttcctgtgt
gaccgggaggcgtgcttcaaatggtactctaagctaatgggagatgagccagacctggac
ccggacatcaacaaggacttctttgagaacaatgttctgcagctggacccgtccctgctc
acggagaacggcatgaagtgcttcgagaggttcttcaaggctgtcaactgccgcgagggc
aaactggtggccaaacgcagggcctacatgatggatgacctggagctcataggactggac
tacctctggagggtggtgatccagggtactgatgacatcgccagccgagccatcgacctg
ctgaaggagatctacaccaacctggggcccaagctgcaggtcaaccaggtggagatccac
gaggacttcatccagttgtgttttgaccgtctgaaggcgtcgtatgacacgctgtgtgtc
ctggacggggacaaggacagcatcaactgtgcccggcaggaggccatccgcatggttcgc
gtgctcaccgtgctcaaggagtacatcaacgaatgtgacagtgactaccacgaggagagg
tccatactgcccatgtccagggcgttccgggggaagcacatcacgttgatcgtgcgtttc
cctaaccagggtcgtcaggtggatgacctggacatctggtctcacaccaatgacaccatc
ggctcggtgcgccgcggcatcctcacacgcatcaaggccaacgccacgcacaccaagata
gagctcttcattggcggggaggttgtcgacccagcggatgacaggaagctgattggacag
ctcaacctcaaggacaaagcattgatcacagccaagctgacccaggtgagtgccaccgtg
ccctccagtcctgacagctcctcagactcctccaccggctcacccagtaaccatggcaac
cacttcagcgaagggcccaacccagaggtggagggctgcctgcctggagtgatcatgtct
ctccacctgcgctacatctcgttcctgtggcaggtagcagacctgggctgtaccctcaac
atgcctctgctgcgagatggagccaggctcctcatgaagcttatgcctccagacaacggt
accgtggagaacctgcgcgctatctgtctggatcatgccaagctgggagagaacagcctg
agccccacactggactcccgcttctttggcccctcgccctcacaagtcctctacctcact
gaggtggtgtatgcattggtgatgccggccagcggcaccctcggcgaggacgccagcgac
ttccagtacaacttcctgaagagcggcggcctcccactcgtactgagtatgctcaccagg
aacaacttcctgccgtcggccgacatggagacgcggcggggggcgtacctcaatgccctg
aagatcgccaagctactgctgaccgccgtggggttcggacacgtcaaagctgtggccgag
gcctgccagcccgtagtggaggggaccagccccgcatcgccggctgcctgttacgcgaat
gcagtagaagccaagatcaaccaggcgacccacgaccaggccctggtcctccagagtgct
ctacagaatatcccgaaccccgcctctgagtgcatgctccgcaacgtggccatacgactg
gcccaacagatctctgacgagtctctgcccccgaactcccagaacttcttccaagcatcc
aagtacatcccagacctctgtgtgatccgggcggtgcagaagattgtgtgggcttcaggc
tgtggcacggtacagctggtcttcagctctaatgaagagatcagtcagatctatgagaag
acgaacgcgggtaaggagccggacggggaggatgagatggtgtgctgtgaggcactggag
atcatgaccctgtgttttgccctgctgcccaccgctctggacactctcagtaaggagaag
gcctggcagacttacatcatagacctgctactgcactgccacagcaagtcagttcgtcag
atggctcaggaacagttcttcctcatggccactaggtgctgtatgggacacagacccctc
ctcttcttcatcaccctcctcttcaccgttttagggagcacggcaaaggagagggcgaag
cacgcaggggactactttacgctgctgaggcacctgctgaactacgcctacaacagcaac
atcaacctgcccaacgctgaggcgctgctcaacaatgagatcgactggctcaagaagatc
agggatgaggtgaagcggacaggagagacgggggtggaggagaccattctagaaggtcac
ctgggggtcaccaaggagctgctggccttccagacaccagagaagaagtactacattggc
tgtgagaatggcggtgccaacctcataaaagagttgatagatgacttcatcttcccggcg
tctaatgtgtacctgcagtacgtgaagagtggggagttcccaacggagcaggccatccct
gtctgtagcagccccgcctccatcaacgccggcttcgagttgctggtggctctgccggtc
ggctgtgtccggaacctcaagcagatcgttgatacactcacagatatgtactacctaggt
tgtgaggctctgacagagtgggaatacctccccccagtggggccgcggcccaccaaaggc
tttgtggggctgaagaatgcgggggccacctgctacatgaactcggtcatccagcagctc
tacatgatcccgcccatccgtaacggtgtcctggccgtggagggcaccggcaccgacgtg
gacgatgaactgtccggggacgagaagcaggagaacgagactaatgcagacggaacggtg
cgggacgaggtgttcccctaccaacaccagtttgacgacaagccctcgctgagtaagtcg
gaggacaggaaggagtacaacattggggtgctacgccacctacaggtcatctttggtcac
ctggcctcctcccgactgcagtactacgtaccccgaggcttctggaaacagttcaggtta
tggggtgagccggtgaatctgcgagagcagcacgatgccctggagttcttcaactcttta
gtggacagtctggatgaggctctgaaggccatgggccactcctccatgctcagcaaggtg
ctgggaggctcctttgccgaccagaaaatctgccgtgactgcccacacaggtatgaatgt
gaggagtccttcaccacgttgaacgtggacatcaggaaccaccagaacctgctggactct
atggagcagtacgtcaaaggagacctgctggagggagccaacgcataccactgtgagaag
tgtaacaagaaggtggacacagtgaagcgtctgctgatcaagaagcttcctccagtgctg
gccatccagctgaaaaggtttgactacgactgggagagggagtgtgccatcaagttcaac
gactactttgagttccccagggagctggacatggagccctacactgtggccggggtggcc
aagctggagggagatgacggcaacccggagagccagatgatcatgcagaacgaaccatcg
gaacccgacccgccaggctgcagttctaagtaccgcctggtgggggtgctggtgcattcg
ggccaggccagcggcggccactactactcctatatcagccagcgagacggtggcaccggc
ggtagcgccgacagcgggcagaaggagcgctggtacaagtttgacgacggtgacgtgacg
gagtgcaagatggacgacgacgaggagatgaagagccagtgcttcgggggggagtacatg
ggagaggtgtttgaccacatgatgaagaagatgtcctacaggaggcagaagagatggtgg
aacgcctacatcctgttctatgagaggatggacgcggcagggggaggggccgcagtggag
gcagacggagagctggccaggtgcatctcagagctgactgtgtctcccactacaccacga
caggtgacgatgccgggggccattgaatgcagtgtgaggaagcagaacgtccagttcatg
cacagccgtatgcagtacagcttggagtacttccagttcgtcaagaagctgctgacctgc
aacagcgtctacctcaaccctcccccgggtcaggaccacctgctgccagaggcagaggag
atagccatgatcagcatccagctagcagctaggttcctcttcagcactgggtttcacacc
aagaaagtagtccgggggcccgccggtgactggtatgacgccctgtgcatcctgctgcgc
cacagtaagaacgtccgctgctggtttgcccacaacgttctgtttgcgtaccccacgcgc
ttctctgagtacctgctggagtgtcccagtgctgaggtccggggggccttcgccaaactc
atcgtcttcatcgcccatttctccctggcggacgggccatgccccgcccccgccagctcc
cctgacgggtccacacagggctgtgataacctgagtctgagtgatcacctgttgagggca
gtgttgaacctgctcaggagagaggtgtcagagcacggccgacacctgcagcagttcttc
aacctcttcgtcatgtacgccaacctgggtctggcagagaagacccagttgttgaagctg
agtgtccctgctaccttcatgctggtggctctagacgaggggcctggccctcccataaag
taccagtatgcagaactgaccaagctctacgctgtggtctcccagctactgcgctgctgt
gacgtctccacacgcatgcagtcgtccatcaatggtaacccgtccctggccaacccgtac
ggagacgccaacctgaccacccccatcatgcccctgcaacagctggtgtcagagatcctc
ttcgttaggaccagctatgtgaagaagatcatcgaggactgcagcaactctgaggagacg
gtcaagctgctgcgcttcagctgctgggaaaacccccagttctcctctaccgtgctgtct
gagctgctctggcaggtggcgtactcctacacgtatgagctgaggccttacctggacctg
ctgctgcagatactgctgatagaggactcctggcagacccacaggatccacaacgtgctg
aagggtataccagacgacagggacggcctgtttgacaccattcagcgctctaagaaccac
taccagaaacgggcctaccagtgtatcaagtgcatggtggctctgttcagcaactgtact
gtggcctaccagatactacagagtaacggggacctgaagcgtaagtggacgtgggcggtg
gagtggctgggggacgagctggagaggaggccctacacagggaacccccagtacacctac
aacaactggtctccccccgtccagagcaacgagacctccaacgggtacttcctggagcgc
tcacattccgcacgcatgaccctggccaaggcctgtgaactttgccccgaggaggtacgg
aaggagccagatgatcaggaggcaacagaagatcacgactcctcccctcccgaggacaca
gcgctgtacccccataaccctgctcctgccacgcagtttcagcagcagaacaaccacccc
cacgcccagccctatacaggtccggctgcccagcacatgaacacgccccagcggccccca
cagagagcacaggagagctgggagagcaccacagaggaggtggggcccgtggcgccccca
cccgctgtccagtcgacaaaagagtaa
DBGET
integrated database retrieval system
