Oncorhynchus mykiss (rainbow trout): 110495787
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Entry
110495787 CDS
T07259
Name
(RefSeq) collagen alpha-1(XXVIII) chain isoform X1
KO
K23619
collagen type XXVIII alpha
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
omy01002
]
110495787
Peptidases and inhibitors [BR:
omy01002
]
Peptidase inhibitors
Family I2: Kunitz - BPTI family
110495787
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
Collagen
VWA_2
Kunitz_BPTI
VWA_3
VWA_CoxE
Motif
Other DBs
NCBI-GeneID:
110495787
NCBI-ProteinID:
XP_036808131
Ensembl:
ENSOMYG00000020921
LinkDB
All DBs
Position
18:complement(20259167..20290820)
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AA seq
1217 aa
AA seq
DB search
MVMSPSLYWFLLLCRLHSLWAQDDYSTHDDRTMDRRAKNQLLTTNVIPKNGQSLLNDDCG
LELAFLVDSSESAKDNHAQEKRFATDVVERLQGVNLQTGRALSSRAALLQFSSHVIIEQT
FKQWRGVANFKARIAPIGYIGHGTYTTYAITNLTKIYMEESEPGSIRVAILLTDGILHPR
NPDIFSAVVDAKNQGVKFFMVGITPAANDISNVAQLRRLASSPANRYLHNLQDRGIVEKV
IKEITELADEGCPLALKCACDKGERGPIGLQGKKGNSGDDGNPGVKGSKGESGLSGLPGR
NGEEGKPGYKGEQGESGECGTPGIKGDRGPEGPVGTRGNRGLQGLPGPNGDAGPEGLIGK
KGERGLSGPPGIQGETGIGLPGHKGDVGFQGRLGPPGPPGLGEPGLPGPQGPQGVQGEKG
PIGEGFAGPKGDRGLEGPRGPRGQPGAGLKGDKGGFGPPGFPGPVGLPGLGIQGEKGIEG
PRGPPGGRGPQGDGYPGPKGDQGLPGELGSTGERGAGEPGDKGEPGASGLAGFPGLPGED
GAPGQKGEPGVGGLRGPEGAAGIGTQGEKGDQGQRGIRGLGGPPGIAGPSGAKGEPGTPG
RLGMPGLPGRGIIGPKGNLGPPGPSGPIGETGYGLPGPKGDRGGPGPSGPFGPKGDGYPG
PTGTPGLPGLPGEPGLEGLGIPGPKGDIGFRGFPGLAGPPGEGLQGLPGGIGRLGPPGPT
GPPGQGIQGPKGEAGSQGVTGPRGPPGEGFTGAKGDRGSGGERGLKGVKGDLGDPGVPGQ
SGRPGFKGDMGLTREDIIKMIKEICGCGIKCKERPMELVFVIDSSESVGPENFEIIKDFV
AALVDRVTVGRNATRIGLVLYSLEVKLEFNLVRHMTKQEVKQAIRKIHYIGEGTHTGTAI
RKATQEAFYSSRKGVSKVAIVITDGQTDKREPVKLDIAVREAHAANIEMYALGIVNTSDP
TQPEFLRELNLIASDPDSEHMYLIDDFNTLPALESKLVSKFCEDENGGLVYNGYGNNGHR
NGNNGNYGNGGNGYGITNQEDFNNRRRTVTTTGTQSQGGSVDLTQPINPGTATVQIGQRE
GGQDGGIYTQDWGTGRGDVPTLNRNTSSSSRDSSSSNTGGSSSSSSSGTSSSSSGSSGSV
QLVPASRPALPKEFVPLDPRCALVLDQGPCRDYKMRWYYDKQANACAQFWYGACEGNQNR
FDTEEECKRTCVQGRAG
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atggtgatgtccccttctctgtactggttcttgctgctctgtagactccacagtctctgg
gctcaggatgactatagcacacatgatgatagaaccatggacaggagagccaagaaccaa
ctactgacaaccaacgtcatacccaagaatggccaatcacttttgaacgatgactgtggc
ctggagctggccttcctggtggacagctcggagagcgccaaggacaaccacgcccaggag
aagaggttcgccacagatgtggttgaacgcctgcagggggtcaatctccagacgggccgg
gctctcagctcgcgagccgccctcctgcagttcagcagccatgtgatcatcgagcagacc
ttcaagcagtggaggggggtggccaacttcaaggctcgcatcgcacccatcggatacatc
ggccacggcacctacaccacctacgccatcaccaacctgaccaagatctacatggaggag
tcagagccagggagcatcagggtggccatactgctgacagacggcatcctccaccccagg
aacccagacatcttctccgccgtggtcgacgccaaaaaccagggtgtgaagttcttcatg
gtgggcatcacgcccgcggccaatgacatctccaacgtggcacagctccgccggctggct
agctccccagccaatcgctacctccataaccttcaggacaggggcatcgtggaaaaggtc
atcaaagagattacagagttggctgatgaggggtgtcctctggccctgaagtgtgcgtgt
gacaagggagagaggggacccattggcctccagggcaagaaggggaattctggagatgat
ggtaacccaggtgttaaaggatcgaagggtgagagcgggctcagtggacttcctggtcga
aatggggaagagggcaagccgggctacaaaggagagcagggggagagtggagaatgtggc
acacctggaatcaaaggagacagggggcctgaggggccagttggcaccaggggaaacaga
gggctacaggggttacctggtccaaatggcgatgccgggcctgagggtctcatagggaaa
aaaggtgagcggggactttctgggccacctggaatacaaggagaaactgggatcgggctt
cctggacacaagggtgatgtggggttccagggacgactggggcctccgggaccacctggc
ttaggggaacctggactaccggggcctcaagggccacagggcgtccaaggagagaagggt
cctataggagaaggctttgccgggccaaagggggaccggggcctggaggggccgagggga
cctagaggacagcccggcgctggactgaaaggagacaagggtggctttggccctccaggt
tttccagggcctgtcggcctgccaggcctgggcattcagggggagaagggtatagagggg
ccacgggggccaccagggggcaggggcccacaaggagatggatatccagggcccaagggt
gaccagggcttaccaggggagcttggttcaacaggagagaggggggctggcgaacctggg
gataagggtgagccaggagcgtcaggattggctggttttcctggcctcccaggagaggat
ggggccccgggacagaagggtgaaccaggtgttggtggtctgaggggaccagagggagct
gcggggattggcacccagggtgagaagggagaccagggccagaggggcattcggggcttg
ggtgggcctcctggaatcgccgggccctctggagcaaagggggagcctgggacaccaggt
cgactgggtatgccaggacttccagggcggggaatcataggacctaagggcaatcttggc
ccacctggtccatctggaccaataggagagacgggctacgggctgcctggtcctaagggt
gatcgtggaggtcctggtccgtctggtccatttgggcccaaaggtgatggttatcctggc
cctacgggaacacctggtctaccggggcttcctggtgaaccaggcctggaggggctgggc
atccctggaccgaagggcgatattggcttcaggggctttccaggtttagcaggcccccca
ggcgaggggctacaaggtctaccgggtggcattggacgactgggccccccagggccaacg
gggccccctgggcagggtattcaggggccaaagggcgaggcagggtctcagggcgtgacg
ggccctcgggggccaccaggggaaggattcacaggggccaagggtgaccgcggctctgga
ggggagaggggcctgaagggggtcaaaggtgatttgggtgaccctggagttcctggccaa
tcaggcagaccagggttcaaaggtgacatgggcctcacaagagaagacatcattaaaatg
atcaaggagatttgtggttgcggaatcaaatgcaaggagcggcccatggagctggtgttc
gtcattgacagctcggagagcgtggggccggagaactttgagatcatcaaggactttgtg
gcggccctggtggaccgtgtgacggtgggccgcaacgccacccgcataggcctggtcctc
tacagcctggaggtcaagctagagttcaacctggtgcgccacatgaccaagcaggaagtc
aaacaggccatacgaaaaatccattatataggtgagggcacccacacaggcaccgccatc
cgcaaggccacccaggaggccttctacagctctcgcaaaggggtgagtaaagtggctata
gttattacagacggacagacggataagcgggagccggtgaagctggatattgcggtgcgg
gaggcgcacgcagccaacatcgagatgtacgcattggggatcgtgaatacgtcagacccc
acgcagcccgagttcctgagggagctcaacctgatcgcgtcggaccctgatagtgaacac
atgtacctcattgatgacttcaacacgctgccagctctggagtccaagctcgtcagcaag
ttctgtgaagacgagaacggtggtctggtatacaacggctacggcaacaatggacacagg
aacgggaacaatgggaactatggcaacgggggcaatggctatggaatcaccaatcaggag
gacttcaacaacaggaggcggacagtcaccactaccggcactcaaagtcagggtggcagc
gtagacctgacccagcctatcaaccctggcactgccacagtacagatagggcagcgtgag
ggaggccaggatggaggtatttacacccaggattgggggactggtcgcggggacgttccc
acgttgaaccgcaacacatcctcctcctccagggattcctcatcttccaatacaggaggg
tcctcttcctcatcatcatcaggaacgtcatcttcatcctcagggtcctcaggctctgtc
cagttagtgcctgcatcacgacccgcacttcccaaagagtttgtgcctctggaccctcgc
tgtgcactggtcctagaccagggcccctgccgggactacaaaatgcgctggtactacgac
aagcaggccaacgcatgcgcccagttctggtacggagcctgtgaggggaaccagaaccgc
ttcgacacagaggaggagtgtaagaggacatgcgtgcaaggcagagcaggctga
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integrated database retrieval system
