Oncorhynchus mykiss (rainbow trout): 110495826
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Entry
110495826 CDS
T07259
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-5 isoform X1
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04080
Neuroactive ligand-receptor interaction
omy04082
Neuroactive ligand signaling
omy04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
110495826
04082 Neuroactive ligand signaling
110495826
04519 Cadherin signaling
110495826
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
omy04040
]
110495826
Ion channels [BR:
omy04040
]
Ligand-gated channels
GABA-A
110495826
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Chromo
CytochromB561_N
Motif
Other DBs
NCBI-GeneID:
110495826
NCBI-ProteinID:
XP_021426958
Ensembl:
ENSOMYG00000024190
LinkDB
All DBs
Position
18:22566668..22596390
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AA seq
542 aa
AA seq
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MMALSTDKEDKMPSFSTMKHVWISVLLVCITCHVGRGQTTAEALKEAEANDNITIFTRIL
DGLLDGYDNRLRPGLGEKVTEIKTNIFVTSFGPVSDTEMEYTIDVFFRQSWKDERLCFKG
PMEMLPLNNLLASNIWTPDTFFLNGKKSIAHNMTTPNKLLRLKDDGTLLYTMRLTISAEC
PMQLEDFPMDAHACPLKFGSCPTPPLIDGHPAYMVRRLVSVRPRGRSFQYLVDWEGYDLE
ERCWVPTKDILDPALIVDFHSRHPGQPGMRPDAYPVSEVVYLWQTGAAKSVVVAEDGSRL
NQYHLIGQTAGSEDIYTSRGQYTVMMCHFYLKRKIGYFVIQTYMPCFMTVILSQVSFWLN
RESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVN
YFTKRSWAWDGKKAMEAQHPKKRDPMVLSKKPNNVCTAGVNYTPNITKDISISTISNSTS
IQLRSSETEVLDPKKTYNSVSKIDKMSRIVFPVLFGTFNLVYWATYLNREPVIKGVNILA
PT
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgatggctctctctacggacaaagaggacaaaatgcccagcttttctacaatgaaacac
gtgtggatctctgtcttgctggtgtgtattacatgtcacgtgggtcgtggccagaccaca
gcagaggcattgaaagaggcagaggctaatgacaacatcaccatcttcacccggatactg
gacggactgctggacggctacgacaacagactcagaccaggacttggagaaaaggtcacg
gagatcaaaaccaatatatttgtcacaagctttggcccagtttcagatactgaaatggag
tacaccatcgatgtgtttttccgacaaagctggaaagacgagcgcctgtgtttcaaagga
cccatggagatgctgcctctgaacaacctcctggccagtaacatctggaccccagacaca
ttcttcctcaatgggaaaaagtctatcgcccacaacatgaccacgcccaacaagctactg
agactgaaggatgacggaacgctgctctacaccatgaggttaaccatatcggcggagtgt
cccatgcagttggaggacttcccaatggatgctcatgcttgccctctgaagtttggaagc
tgccccactccccctctcatcgatggccatccggcatacatggtgagacgcctggtgagt
gttcgacctcggggcaggagtttccagtacctggttgactgggagggttatgacctggag
gagaggtgctgggtccctactaaggacatcctggacccggccctcatcgttgactttcac
agccggcatcccggtcaaccaggtatgcgcccagatgcctatccagtctctgaggtggtg
tacctctggcaaaccggtgctgccaagtctgtagtggtggcagaagacggatcccgtctc
aatcagtaccacctgatcggccagaccgcaggctctgaggacatctacactagtcgagga
cagtacacagtcatgatgtgtcacttctacctgaagaggaagattggttactttgtcatt
cagacctacatgccctgcttcatgaccgtgatcctgtcccaggtgtccttctggctcaac
cgtgaatctgtaccagccaggaccgtctttggtgtcactacagtgttgactatgactact
ctcagtatcagcgctcgcaactcgctgcctaaggtggcctacgccacagccatggattgg
ttcatcgctgtgtgctatgcgttcgtcttctccgcacttatcgagtttgccaccgtcaac
tatttcaccaagaggagctgggcgtgggatggcaaaaaggccatggaggctcagcaccca
aagaaaagggaccctatggtgctttctaagaagcccaacaatgtctgtacagcaggagtg
aactacacccccaacatcactaaggatatctctatctccaccatctccaacagcacctcc
atacaactaagatcgtctgaaacagaagtcctggaccccaagaaaacctacaacagcgtg
agcaaaatcgacaaaatgtcccggatagttttccctgtcctatttggaacctttaaccta
gtgtactgggctacttacctcaacagagaaccggtcatcaaaggagtcaacatattggct
ccaacatag
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