Oncorhynchus mykiss (rainbow trout): 110495880
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Entry
110495880 CDS
T07259
Symbol
blm
Name
(RefSeq) Bloom syndrome protein homolog isoform X1
KO
K10901
bloom syndrome protein [EC:
5.6.2.4
]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03440
Homologous recombination
omy03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
110495880 (blm)
03460 Fanconi anemia pathway
110495880 (blm)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
omy03032
]
110495880 (blm)
03400 DNA repair and recombination proteins [BR:
omy03400
]
110495880 (blm)
Enzymes [BR:
omy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
110495880 (blm)
DNA replication proteins [BR:
omy03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
110495880 (blm)
DNA repair and recombination proteins [BR:
omy03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
110495880 (blm)
Bloom's syndrome complex (BTR)
110495880 (blm)
FA (Fanconi anemia) pathway
110495880 (blm)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
BLM_N
BDHCT
RecQ_Zn_bind
Helicase_C
HRDC
RQC
ResIII
Motif
Other DBs
NCBI-GeneID:
110495880
NCBI-ProteinID:
XP_021427063
Ensembl:
ENSOMYG00000030943
LinkDB
All DBs
Position
2:complement(73579896..73605873)
Genome browser
AA seq
1474 aa
AA seq
DB search
MSSLPQNNLKEQLERHSNAAQRKLSLSKPKPGTFCFKKKSTSGITKVEVHTKVNSSNGLT
NRSVNVPHDNAVIKPPLTFSTKPERPLAKINFSSVNPKSKYEAISPFSGRKPIPAVSAAK
ISPALTKSDSLITGSNGSKPTGLDSSFGIPLDGWDDFDDFETPAKGKSTLPSPGISGRSA
KVTPVSSVEQLDTNTHRSDKYVPLRALNTKTNSRHRNKCSLDGTEQCTLTMEDSQDASES
ASTAPSDNPIQDPAEWEHWEVEDSPIKMVRRRPSASQAKSVLSDSEDENITAPGPVEKID
HQSKWNETDVIDLDDKSELGGDLDFIPPSPSPEDFSHSTSTKETSVVYDHNRLKSAGSAV
RKDISPESTRGSVSSLQRMSDGPLKERKVTNPKSEDQLLSIMESICALVDSIPDHELLGL
SCGTELLLQRAHRKRIIAAGSSDTSLRTQQPDSTVLESRFSEKTTFSFATPSVMSSTTCL
PKGKGDSSMKALPFRRSSVISVDYDSSVFEDSDCMINVQTPGISWRPSTQENPIFTRDKK
KASTTGQSNCDSPSNYSIFKKQIGDVAQSNFFFSPKSPAAAVQMTGESSTQASVAQAPVV
TEPDDFFIDDFDIDDFNDSDIPDYFEPPSSSASRQDSSSISKAVREGGPSTSTWQKKPAT
PAPVAKPPKITSPEPTYRNPAHDRFRGFNFPHCPEMMKIFHKRFGLHQFRFNQLEAINAT
LLGEDTFVLMPTGGGKSLCYQLPACVCAGVTVVISPLKSLIVDQVQKLTTLDIPATSLSG
EKTDSEAARIYLQLSKKDPIIKLLYATPEKVCASGRMISALQNLYERGLLARFVIDEAHC
VSQWGHDFRPDYKRMHELRQKFPKVPIMALTATATPRVQKDILNQLQMTQPQVFTMSFNR
NNLKYAVLPKKPKKVDEDCIDWIKKNYPRDSGIVYCLSRNDCDNMADSLQRAGILALAYH
AGINDKDREYVQTKWINQDGCQVMCATIAFGMGIDKPDVRYVIHASLPKSVEGYYQESGR
AGRDGEISHCILFYSYSDVIRIKRILTMDKDGNHHTKATHLNNLHSMVHFCENVMDCRRI
QLLAYFGEHKFNPGFCKEHPDVICDNCARPNQYKARNVTEDVKKIVRFVQENCEKVGSRY
SKSANQNRLTLNMLVDIFLGAKTARVQSGMFAIGKAYSKHNADRLFKKLVLDHLLVEDLY
ITANSQAVAYISAGPKAINVLGGHMQVEFYETESASSIRKHKTAVAKDVSKSEEMVQKCL
QELTDLCKRLGKVFGIHYYNIFSTATLKMIAETLSADPDVLLTIDGVTEDKLEKYGADVI
ALLQKYSEWKLPVEEQSDTTEGSSTMAWIDTRRGRGDDEEDCYEDDAGSSSYFNSNNGRG
AKRKKAPAFKKSKKRKGYTNSNSKGKYSNNGSWTGSNSRGGSKGRGSAAGRASAAGRGSR
PSAAGPVGRRPGFMALPTPQTNSRPFLKPAFSVL
NT seq
4425 nt
NT seq
+upstream
nt +downstream
nt
atgtccagtcttcctcaaaataatttgaaggaacaactcgagagacatagcaatgctgct
cagagaaaactgtcgttgtctaaaccaaaaccagggacattttgtttcaaaaagaagtcc
acatcaggtatcaccaaggtggaagttcacactaaggtaaacagctcaaatggtttaaca
aacaggagtgtcaatgttcctcatgataatgcagtaattaaacctcctttgacgttttca
accaagcccgaaagacctctcgccaaaatcaacttctcctcagtcaatcccaaaagcaag
tatgaagccatcagtcccttttcggggaggaaacccatcccagctgtgtctgctgcaaag
atttcccctgctttgaccaaatctgatagcttgatcacaggtagcaatggcagcaaaccc
acaggacttgatagctcttttggtattcccctggacggatgggatgattttgatgacttt
gaaacccctgccaagggcaaaagtactctaccaagcccagggatctcaggtaggagtgcc
aaggtgacacctgtttccagtgttgaacaattggatactaacacacacagatcagacaaa
tatgtccctctacgagcgctgaatacaaagaccaacagccgtcacagaaataagtgtagt
cttgatgggacagaacaatgtactctcacaatggaggactcacaagatgcttcggagtct
gccagtactgctccaagtgacaatcccatccaggatccagcagagtgggagcactgggag
gtggaggattctcccattaaaatggttagaagacgaccttctgcttctcaagccaagtct
gtgctgagtgacagtgaagatgagaacatcactgcacccggtccagttgaaaagatagat
catcaaagtaaatggaatgagacagatgtcatagaccttgatgacaagtccgagctaggt
ggagacctagatttcatccccccttccccaagtccagaggatttcagtcattctacttct
acaaaggaaacaagcgttgtttatgatcacaacagattgaagtcagctggctctgcagtc
cgtaaagacatcagtcctgaatcaacaagagggtcagtgtcgagcctgcaaagaatgtct
gatggtcctctgaaagaaagaaaagtcaccaatccaaagtctgaagatcagctcttgagt
atcatggagtccatctgtgctctggtggattccatccctgatcatgaactattaggcctg
tcctgtgggacagagctcttactgcagcgggctcataggaaaaggataattgctgctggc
agcagtgacacatctttaaggacacaacagccagacagcactgtcttggaatccagattc
agtgaaaagactactttttcctttgctactccaagtgtcatgtcttccaccacttgcctg
cccaagggtaaaggagattcttccatgaaagcccttcccttcaggaggtcctcagtcata
tctgtggactacgacagtagtgtttttgaggactctgactgtatgatcaatgttcagact
ccaggcatctcttggagacccagcactcaggaaaatcctattttcactagagacaagaag
aaagcatccacaacaggccaaagtaattgtgactctccatcgaattacagtatcttcaaa
aaacaaattggtgatgtggctcagtcaaatttcttcttctcaccgaagagcccggcagct
gctgtacaaatgactggggagagcagtacccaagcctctgtggcacaagccccagtagtt
acggagccagacgatttcttcattgatgactttgacatagatgacttcaatgattcagat
atccctgattactttgaacccccaagctcctcagcgtcaaggcaggactccagttctatc
tctaaagcggtgcgtgagggaggaccaagtacatcaacatggcagaagaaaccagctaca
ccagctcctgtggccaagcctcctaaaatcacctctcctgagcccacatacagaaaccct
gctcacgatcgcttcagaggcttcaacttcccccactgtccagagatgatgaagattttc
cacaagcgctttggtctccatcagttccgattcaatcagttggaagccattaatgctacg
ttgttaggtgaagacacatttgtcctgatgccaacaggagggggtaaaagtctttgctac
cagctgccggcctgtgtgtgtgcaggagtcactgtggtcatctcaccactgaaatcactc
attgtagaccaggtccagaaactcactactctggatattcccgccacaagtttgtctggt
gagaagactgacagtgaagcagccaggatctacttgcagctgtccaagaaggaccccata
attaaattgctctatgcaactcctgaaaaggtgtgtgcgagtggcaggatgatcagtgcc
cttcagaacctgtatgagagaggtcttctagcacgctttgtcattgatgaggctcactgc
gtcagtcagtggggccatgacttccggccagactataagcggatgcacgagctgcggcag
aagttccccaaagtgccgatcatggccctgaccgccactgccaccccccgcgtccagaag
gacatcctcaatcagttgcagatgacccagcctcaggtgtttaccatgagcttcaacaga
aacaacctcaaatatgctgtgttacccaagaaacccaagaaggtagatgaggactgcatt
gactggatcaagaagaattatccacgtgattctggcattgtgtactgcctgtcccgtaat
gactgtgacaacatggctgacagtcttcagagagctggtatactagcgctagcctaccat
gcaggcatcaatgacaaagacagagaatatgtacagaccaaatggatcaatcaggatggc
tgccaggtcatgtgtgccaccatagccttcggcatgggcatcgacaagcctgatgtgcgc
tatgtgatccacgccagtctccccaagtcagtagagggctactaccaggagtcaggcaga
gcaggcagggacggagagatctctcactgcatcctcttctactcctactctgacgtcatc
cgcatcaagagaatcctcaccatggacaaagatggaaaccaccatactaaagccactcac
ttgaacaatctgcacagtatggtacatttctgtgagaacgtgatggactgccgaaggata
cagttgctggcttactttggagagcacaagttcaacccaggcttctgcaaggaacaccct
gatgtcatctgtgacaactgtgccagacccaatcaatacaaagcaagaaacgtgactgaa
gatgtgaagaagattgtgagatttgtccaggagaattgtgaaaaagttggctccagatac
agcaaatctgcgaaccaaaaccgactgactctgaacatgttggtggacatcttcttgggt
gctaaaaccgcccgtgtccagtcagggatgtttgcgataggaaaggcttactccaaacac
aacgctgaccggcttttcaagaagctggttctggatcaccttctggtggaggacctgtac
atcacagccaacagccaggcagtggcctacatctctgctggacccaaagcgatcaatgtc
ctcgggggacacatgcaggtggagttctatgagaccgagagtgcctctagcatcaggaag
cacaaaactgctgtggccaaggatgtctccaagagcgaggagatggtccagaagtgtctg
caggagctcactgatctgtgcaagaggctgggcaaagtctttggcattcactattacaac
atcttctccactgccaccctgaagatgatagccgagacgctgtcggccgacccggatgtg
ctgctgacgattgatggtgtgacggaggacaaactggagaagtatggagcagatgtcatc
gcgcttctgcagaaatactctgagtggaagctacctgtggaggagcagtctgacacaact
gaaggaagctccactatggcatggatagacacaaggagaggccgcggagacgacgaggag
gactgttatgaggacgacgctggatcttccagttatttcaacagtaacaacggcagagga
gcgaaaaggaaaaaggctcccgccttcaagaaatccaaaaagagaaaaggatatacaaac
tccaactctaaagggaagtacagcaacaatgggtcgtggacagggtccaactccagaggt
ggatctaaaggccgggggtcagcagcaggacgtgcgtcagcagcagggcggggctctagg
ccttcagcagcaggcccagtggggaggaggcccggctttatggccctccccacaccacaa
acaaacagccggccattcctcaaaccagccttctctgtactgtag
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