Oncorhynchus mykiss (rainbow trout): 110495931
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Entry
110495931 CDS
T07259
Name
(RefSeq) trafficking protein particle complex subunit 10
KO
K20307
trafficking protein particle complex subunit 10
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omy04131
]
110495931
Membrane trafficking [BR:
omy04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
110495931
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAPPC10_1st
TRAPPC10
Ig_TRAPPC10
Foie-gras_1
SNAP
Motif
Other DBs
NCBI-GeneID:
110495931
NCBI-ProteinID:
XP_021427136
Ensembl:
ENSOMYG00000023464
UniProt:
A0A8C7RL23
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Position
18:complement(27065029..27083077)
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AA seq
1274 aa
AA seq
DB search
METHEETPIIYTMENKPIVTCAGDQSLFTSLYTSLAQQLPKEPMEWRRSYGRAPKMIHLE
ANFVQFKEELLPKDGNRALLTFPFLHIYWTDCCDTEMYKASVKDDMLRWQSTLRLDGSVD
WLIVVVESEAKKKNKTNILPRTSIVDKIRNDFCNKQSDRCVVLSDPLKESSRSQDSWSSF
LTKLRTLLLMSFTKNLGRFEDDMRTLREKRTEPGWSFCDYFMVQEELAFVFEMLQQFEDA
LVQYDELDALFTQYVLNFGAGDGANWLGSFCAPVKRWSGLLLRRPIDMEKRELIQRGEAS
LLDLRSYLFSRQCTLLIFLQRPWEVTQRALELLHNCVQELRLLEVSVVQGALDCWVFLSC
LEVLHRIEGCCDRAQLEANCSHTVGLWTYATEKLKSLGYLCGLVAEKGPTSEDLNRTVDL
LAGLGEERPETVNSLQSPYKKLNEALSSVEAFEKHYLELSHAAMEMYRAIGRMRSSRLIG
KSLAEFYMKKGDPERAECFLDDSLRSYVAEGWSLQVTHTRKQMAECQKLLQQTEDYLQTS
ALLAGDANLTEEERKHFYQVILTFASQPPAPSDQTVALSMAAFAQLRQMQFSPPGAVVHV
GAALQLELRVRCLMPVAVQVEQLAATLHFSLEQGGARGRAGGTQRRTGQEPQGQGDGVVL
FPQGSSLAGAGMGASLPPALELYEMQDRSPSDSSLNSTGVVCKNMHLLLRRHDSSASLDT
PTAGALPAAVAVDDGAQMLRARDITLQPGDNSILFTAPTGEPGSYTLRQLCGSVGRVQFV
QSHIYPVVQYEVYSQEPQLTIEPLSDNLLAGIPQKVKFTIATGHYNVKKGDALQLSNTDS
MPILHSSCCSATILSSTGERVGERALSVQSSEKVTSISLPPTPPYHTLEFQLEVLCHIPP
TPFKPDIERLTNGEVRHRPKSHSQADSGMIHIDQKVSIDCPWSIYSTLISLTFYVPFKAK
HSILSAGKRKYIQVCLQNVSDTNFQLADPVLTERQPTIPVELLSFNAKTQQTVCSQQSVF
CLWEMRWAKHLPLCLQCAFSASFAPVSASDAHTAFKPYRYEFQLDRVSTLYSLKAEILPS
SGDQHCRTGALCGLEVSITRQAEPSETEGEEEESTEIEGLRTTKLMYEVVDNSSNWAVCG
KSSGVVSMPVAASATHRVQMEVMPLFAGHLPFPNIKVFKYLPHSAVPAIQPDTDSCLEND
TMSLLDKGLDDQGDTASIRSRGSIHSVGSGEQQRGLPMPRLEPFSPGQVFYWSQGRQVLV
LPVTDDHVMEVNVT
NT seq
3825 nt
NT seq
+upstream
nt +downstream
nt
atggagacccatgaagaaacgccaataatctacacaatggaaaacaagccgattgtgaca
tgtgctggcgaccagagcctgttcacttccctctacacctctctggcacagcagttaccc
aaggagcccatggagtggaggaggtcctacggacgcgcaccaaagatgattcacctcgag
gccaactttgttcagttcaaagaggagctgcttcctaaggacggaaatagagccttgctc
accttccccttcctgcacatatactggacagactgttgtgacacagagatgtacaaggcg
tcggtgaaggatgacatgctgcggtggcagagcaccctgcggctggacggctcggtggac
tggctcatcgtggtggtggagagcgaagccaagaagaagaacaagaccaacatcctgccg
cgcacctccatcgtagacaagatccgcaacgacttctgcaacaagcagagcgacaggtgt
gtggttctgtctgaccctctgaaggagtcgtctcggtcccaggattcgtggagctccttc
ctgactaagctgcgcaccttgctgctcatgtccttcaccaagaacctgggccgcttcgag
gatgacatgcgcacgctccgcgagaaacgcaccgagcccggctggagcttctgcgactac
ttcatggtgcaggaggagttggcctttgtgtttgagatgctgcagcagtttgaggatgct
ctggtccagtatgacgagctggacgctctcttcactcagtatgtcctcaattttggggct
ggagacggggccaactggctgggctcgttctgtgccccggtgaagcgctggagcgggctg
ctcttgcggcggcccatcgacatggagaagcgcgagctgatccagcgtggtgaggccagc
ctgctggacctgcgcagctacctcttctcccgccagtgcaccctgctcatcttcctccag
aggccctgggaggtcacccaacgagccctggagctgctgcacaattgtgtccaggagctg
cgcctgctcgaggtgtctgtggtccagggggcgttggactgctgggtgttcctcagctgt
ctggaagtgctgcacaggatcgagggctgctgcgaccgcgcccagctagaggccaactgc
tcccacactgtcggcctgtggacctacgccacagagaagctaaagtctctgggctacctg
tgtggcctggtggccgagaagggccccacctccgaggacctaaaccgcaccgtagacctt
ctggctggcctgggggaagagagaccagagacggtcaacagcctgcagagcccttacaaa
aaactcaatgaggccttatcgtctgtggaggcatttgaaaaacactatctggagctgtct
catgctgcaatggagatgtacagagccataggcaggatgcgctcatcccggctcattgga
aagagtctagctgagttttacatgaagaaaggtgacccggagagagcagagtgcttcctt
gatgactctctgaggtcctacgtggcagaggggtggagcctgcaggtgactcatacccgg
aagcagatggccgagtgtcagaagctcttgcagcagactgaagactacctgcagaccagt
gccttgctggcgggcgacgccaacctgacagaggaggagaggaagcacttctaccaggtg
atccttaccttcgccagccagcccccggcaccctcagaccagactgtggctctgagcatg
gcggcgtttgcccagctgcgccagatgcagttcagcccgcctggcgccgtggtgcacgtg
ggtgccgccctgcagctggagctgcgcgtgcgctgcctgatgcctgtggccgtgcaggta
gagcagctggctgccactctccacttcagcctggagcagggcggggcgaggggccgggcg
ggcggcacccagaggaggacaggccaggaaccacaaggccagggggacggggtggtcctg
ttcccccagggaagctccctagctggggccgggatgggcgcttcgctaccccccgcactg
gagctttatgaaatgcaggaccgcagcccgtcggacagctcgctcaactccacgggggtg
gtgtgtaagaacatgcacctgctgctgcggcgccacgacagctcagcctccctagacacg
cccaccgccggggccctcccggcagcggttgccgtggacgacggggcccagatgctgagg
gcacgcgacatcacgctacagcccggcgacaacagcatcttgttcacggcccctactgga
gagccgggctcgtacacgttacgtcagctgtgcgggagcgtggggagagtccagtttgtc
cagtctcacatctaccctgtggtgcagtacgaggtctactcccaggagcctcagctcacc
atcgagcccctctcagacaacctgttggcaggcattccccagaaggtgaagttcaccata
gcaacaggccactacaatgtgaagaagggtgacgcgctgcagcttagcaatacagactcc
atgcccatcctccactctagctgctgctctgctaccatcctgtccagcacgggagagcgc
gtgggggagcgtgctctttctgtccagtcatcggagaaggtgaccagcatttccctgccc
ccaacccctccctaccacaccctggagttccagctggaggtgctgtgccacatccccccc
acgcccttcaagcccgacatcgagcgtctcaccaatggcgaggttcgccaccggcccaag
agccacagtcaggcagacagtggcatgatccacatcgaccagaaggtctccatcgactgt
ccttggtccatctactccacgctcatatccctcaccttctatgtccctttcaaagccaag
cactcaatactctctgctgggaaaaggaagtatatacaggtgtgtctccagaacgtgtcc
gacacaaacttccagctggcggacccggtcctcacagagcgccagcccacaatcccggtg
gagctgctctcattcaatgctaaaacacaacagacggtgtgcagtcagcagtcagtcttc
tgcctgtgggagatgcgttgggccaaacacctcccgctgtgcctgcagtgtgcattctcc
gccagcttcgcgcccgtctccgcctctgacgcacacacagccttcaaaccctaccgctac
gagttccagctggaccgggtctctaccctttacagcttgaaagccgagatcttgccgtcg
tctggtgaccagcactgtcgcaccggcgccctctgtggcctcgaggtatcgatcacacgg
caggcagagcccagcgagactgaaggggaggaggaggagtctacagaaatagagggcctg
aggaccaccaagctcatgtatgaagtggtggacaacagcagtaactgggcggtgtgtggc
aagagctcgggggtggtgtccatgcccgtggctgccagcgccacacacagggttcagatg
gaggtcatgcccctgttcgctgggcacctgcccttccccaacatcaaagtgttcaagtac
ctgccccacagtgccgttccagccattcagccggacacagacagctgcttagagaacgac
accatgtccctgctggacaaaggtctggacgaccagggcgacacggccagcatccgtagc
cggggcagcatccactcggtgggcagtggggagcagcagaggggtctgcccatgccccgg
ctggagcccttcagtccgggacaggtgttctattggagccaggggcggcaggtgctggtg
ctgcctgttactgacgaccacgtgatggaggttaacgtcacatga
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