KEGG   Oncorhynchus mykiss (rainbow trout): 110495989
Entry
110495989         CDS       T07259                                 
Name
(RefSeq) RNA polymerase II elongation factor ELL2 isoform X1
  KO
K15183  RNA polymerase II elongation factor ELL
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Pathway
omy03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:omy00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    110495989
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:omy01009]
    110495989
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:omy03021]
    110495989
Protein phosphatases and associated proteins [BR:omy01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     110495989
Transcription machinery [BR:omy03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     110495989
    Little elongation complex (LEC)
     110495989
SSDB
Motif
Pfam: ELL Occludin_ELL DUF4351 UBR1-like_wing
Other DBs
NCBI-GeneID: 110495989
NCBI-ProteinID: XP_021427253
Ensembl: ENSOMYG00000020279
UniProt: A0A8C7QXZ9
LinkDB
Position
2:74069964..74110824
AA seq 603 aa
MAALRQEHRYGLSCAKINKNVQNKTLYHVKLTDTAIRTLEAYQNLKGSLPNQPAICFKGS
QGYIKIPAPSPDASDALRVFSFYLSSDSKDKPQASFDCTHQYVSREGREHLEGQGSIQDK
ITVCATDDSYQMTRERMSQVEKDIMSRSAIEIKPGSTRGKCVKIQRKQGLSSSMDSSSNK
HSPSNKRSGAPSPVALRPLRDRIIHVLALKAYRKPELLLWLERERASPKDKADLGAVLDD
VAKLNPKDHSFTLKDEFYSHVQKDWPGYLEEEKQLIHRLLARKLQPLSSSSQLKSFQSNH
SFHKTPGDSPSQLSPVKTPSVKRPFPSELSDCQTPKKQRLLDHSLPLQSLSNGHLGPIGA
RSSSGPGNTSVQTKTEFERTNNHIQGSPNGLYTRHKLDGSSSIPKLERTEPVPAVPSPKA
PQTEPSICTDQQLANGQHKKKKSKKHKDKEREHLKQDWIENSPDLKQNQEHFNDHEGAKT
PVTRTSPEELPDYFIKYNIITASEQRQQYKEDFCAEYDEYRALHHRIGTITEMFVQLSSK
INTLSPGTQEYKLMEDQILQKYRKYKKKFPGYREEKKRCEYLHQKLSHIKGLILDYDRIQ
APS
NT seq 1812 nt   +upstreamnt  +downstreamnt
atggcagcgctgagacaggagcatcggtatgggctctcctgtgcaaaaatcaacaaaaac
gttcaaaataaaactctgtatcacgtcaagctaactgataccgccattcgaacgcttgaa
gcctaccaaaatcttaagggatccttaccaaatcagccagcaatttgcttcaaggggagc
caggggtacatcaagatccccgccccgtccccagatgcctcggacgcactacgggtcttc
tccttctacctgtccagtgatagcaaggacaaacctcaggccagcttcgactgcacacac
cagtatgtctcaagggagggcagggagcacctggagggccagggcagtattcaggacaag
atcactgtgtgtgccactgatgactcgtaccagatgacccgggagcgcatgtctcaggtg
gagaaggacatcatgagcaggtcggccatcgagatcaagccaggctccactcgtggtaaa
tgtgtgaagatccagaggaagcagggcctgtcgtcaagcatggacagcagcagcaacaag
cactcccccagcaacaagaggagcggggcccccagcccagtggccctccggcccctaaga
gaccgcatcatccacgtcttggccttgaaggcctacaggaagcctgagctgctgctgtgg
ctggagagggagagggccagtcctaaggacaaggctgatctgggagcagtactggacgat
gttgctaaactgaatcccaaagaccacagctttactctgaaggatgagttctacagtcat
gtccagaaggattggcccggttacctagaggaagagaagcagctcatccataggctcctg
gccaggaaactgcagccactgagcagcagtagccagttgaagagtttccagtcaaaccat
tcattccacaaaacccctggggattctccgtcacaactcagcccggtcaaaactccctct
gtgaaacgcccatttccctctgagctatctgattgtcagacccccaagaagcaaagacta
ttagaccacagtttacccctgcagtccctttccaatggacaccttggtcccattggagcc
cgtagctcatctggtccaggcaacaccagtgtacagaccaaaacagagtttgagagaacc
aacaatcacatccagggaagccctaatggtctctacacacggcacaaactggatggttcc
tccagcattcccaagctggagaggaccgagccggtcccagcagtaccaagccccaaggcc
ccacaaacagagccctccatctgcactgaccagcagctagccaacggccagcacaaaaag
aagaagtccaagaagcacaaagacaaggaacgggagcacttaaaacaagactggatagag
aacagtcccgacctgaagcagaaccaggaacatttcaatgaccatgagggggctaaaaca
cctgtcactcgtacttcaccggaagagctgcctgactatttcataaagtacaacatcatc
acagcctcagagcaacggcaacagtacaaggaggatttctgtgcagagtatgatgagtac
agggccctgcatcaccggatcggtacaatcacagagatgtttgttcagctgagctcaaag
atcaacactctctcccccggtacacaggaatacaagctcatggaggaccaaatcctgcag
aaatacagaaaatataagaaaaagtttcctggttaccgggaagagaagaagcgatgcgag
tatctgcatcagaaactgtctcacatcaaaggtctgatcctggactatgaccgtatccag
gccccttcatag

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