KEGG   Oncorhynchus mykiss (rainbow trout): 110496176
Entry
110496176         CDS       T07259                                 
Name
(RefSeq) splicing factor U2AF 65 kDa subunit
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Pathway
omy03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:omy00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    110496176
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:omy03041]
    110496176
Spliceosome [BR:omy03041]
 Complex A
  U2 snRNP components
   U2 related factors
    110496176
 Complex B
    110496176
SSDB
Motif
Pfam: RRM_1
Other DBs
NCBI-GeneID: 110496176
NCBI-ProteinID: XP_036808604
Ensembl: ENSOMYG00000044400
LinkDB
Position
18:38677975..38693973
AA seq 208 aa
MSISPVLSPTVSLLQSLSSSAQREEESEEVLGCSGTRLRAYHPPCSTTLCRAIAGLNGMQ
LGDKKLLVQRASVGAKNIALTGKNQTLVTLQVPGLMPTSMALLGGLPTEVLCLMNMVVLE
ELLDDEEYEEIAEDVRGECSKYGQVKSIEIPRPVDGLEVPGTGKIFVEFMTLFDSQKAMQ
ALTGRKFANRMVVTKYCDPDAYHRRDFW
NT seq 627 nt   +upstreamnt  +downstreamnt
atgtccatctctcctgtcctgtcccctactgtttctctcctgcagtcgctctccagctct
gcacagagagaagaagaaagtgaggaagtactgggatgttccggcaccaggcttcgagca
tatcaccccccctgcagtacaacgctttgcagggccattgcagggttgaatgggatgcag
ctgggggacaagaagctcctggtccagagagccagtgttggggccaagaacatagcgctg
acaggtaagaaccagaccctggtgaccctccaagtgccaggcctgatgcccacctccatg
gccttgctgggtggcctgcccactgaggtgctctgcctgatgaacatggtggttttggag
gagctgctggatgacgaggagtacgaggagatcgcggaggacgtccgcggtgagtgcagc
aagtacggccaggtgaagagcatcgagatcccccgacctgtggatggacttgaggtccca
ggcactgggaagatctttgtggagttcatgaccctgtttgactcccagaaggccatgcag
gcgctgacaggcaggaagtttgccaacaggatggtggtgaccaagtactgtgacccagac
gcctaccaccgccgagacttctggtag

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