Oncorhynchus mykiss (rainbow trout): 110496210
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Entry
110496210 CDS
T07259
Name
(RefSeq) POU domain, class 2, transcription factor 2-like isoform X2
KO
K09364
POU domain transcription factor, class 2
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
110496210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omy03000
]
110496210
03021 Transcription machinery [BR:
omy03021
]
110496210
Transcription factors [BR:
omy03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
110496210
Transcription machinery [BR:
omy03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
110496210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pou
Homeodomain
HTH_31
Motif
Other DBs
NCBI-GeneID:
110496210
NCBI-ProteinID:
XP_021427656
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All DBs
Position
18:complement(39755539..39825088)
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AA seq
681 aa
AA seq
DB search
MFVPLPVPFVFQRTASDFSAWRLKSPLALRSSSDIRMSKPAEDEKPGADFPGESTDSERN
SPDANDQVQPMKTSPFSLSPTLSSIKSKSEAVPEMISTHVPPPSQQQTPHPHTQLMLAGS
QLAGLAALLPAQQQLLLQQAQAQLLAAAVQQSNAAHAAHAAHAAAQANQQQQQQQLTKQE
QAPPQLTLSQPIQLTAQDIQQLLQLQQLVLMPGHHLQSPQFLLPQAQGQQGQQGLLSTPN
LIPLPQHQQSQGSLLTIPPRLGLQAQRRHGDGLSSLQRDKSGDVGVTSGASAAPMTSVTS
GPHGEEPSDLEELEQFARTFKQRRIKLGFTQGDVGMAMGKLYGNDFSQTTISRFEALNLS
FKNMCKLKPLLEKWLNDAETMAIDSMLPSPNSLSSPMMGFEGMPGRRRKKRTSIETNVRV
ALERNFILNQKPNSEEILLMGQQLNMEKEVIRVWFCNRRQKEKRINPCSATPPLPSQPPS
MTHKTPCYSPHMVSSQGLHQAATSLSTTVTSPLPSVTCPLTHCGSASTSSTPSSRTPPPH
STASPAPSTLSTHSLNAGNTMMGVSTGMNQALVSSNHLATMQALAASGGQLPISSLEARG
QMILGGAGVRPSLFLNRHTLLPMASHQAGVGLVGGPRGASPPPGASGMDVDSCSASPCSS
PASFGSFSEASPPPLGGAMAE
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgtttgttcccttgccggtgccgttcgtctttcagagaactgcttccgacttcagcgcc
tggcgtctcaagtcaccgctggctctacgctccagctccgatatcaggatgtcaaaacca
gcagaggatgagaagcctggggcagactttccaggggagagcacagactctgagaggaac
agtcctgatgccaatgatcaggttcagccaatgaaaacgagtcccttcagtctttctcct
accttgagcagcatcaagagtaaaagtgaggcagtacctgagatgatctccacccatgtg
ccgcctccttcccagcagcagacgcctcaccctcacacacaactcatgttggcagggagt
cagctggcagggctggctgccctcttgcctgcgcagcagcagctgttgcttcagcaggcc
caggctcagctcctggccgctgcggtgcagcagtccaacgcggctcatgctgctcatgcc
gctcacgcagccgcccaagccaatcagcagcagcagcaacaacagctgaccaaacaggag
caagccccaccccagctcaccctctctcagcctatccagctcaccgcccaggatatccag
cagctgttgcagctgcagcagttagtcctgatgcccggccaccacctgcagtctcctcag
ttcctcctgcctcaggcccagggacaacaggggcagcagggtttgctctcgacacctaat
ttaattccgctacctcaacatcagcaaagccaggggagtcttctaactattccacccagg
ctgggactgcaagcacagcgtcgccatggtgatggcctctcatctttacagagggacaag
agcggggatgtcggggtgacctccggggcctcggcagcccccatgacctcagtgacctct
ggccctcacggcgaggagcccagtgacctggaggagctggagcagttcgcccgcaccttc
aaacagagacgcatcaaactgggcttcacacagggtgacgtaggcatggcgatggggaaa
ctgtatgggaatgacttcagccagaccaccatctctcgcttcgaggccctaaacctgagc
tttaagaacatgtgcaagctcaagcctctgcttgagaagtggctaaacgatgcggagacc
atggcgatagacagcatgcttcccagcccgaactctctctcctcccccatgatggggttt
gagggcatgccggggcgtcgcaggaagaaacgcaccagcatcgagaccaacgtccgcgtg
gccttagagcgcaatttcatcttgaaccagaagcctaactcagaggagattctcctgatg
ggccagcagctcaacatggagaaggaggtgattcgggtctggttctgcaaccggcgccag
aaagagaagcgcatcaacccttgcagtgccacccctcccctgcccagccagcccccctcc
atgacgcacaaaaccccctgctacagcccgcacatggtgtccagtcaggggctgcaccag
gctgccaccagcctcagcacaacagtgaccagtccattaccctcggtgacctgccctctg
acccactgtggctctgcatccaccagctccaccccctcctctaggactccgcctccacac
agcacagccagccccgctccttccaccctcagtacccacagcctgaacgctgggaacaca
atgatgggagtaagcacagggatgaaccaggctctcgtcagcagcaatcacctggccaca
atgcaagctctggctgccagtggtgggcagctgcccatttccagtcttgaggccagaggt
cagatgatcctgggcggggcgggggttcgcccctccctattcctcaaccgccacaccctc
ctgcctatggcgtcccaccaagccggcgtgggtttggtcggcggtcccaggggagcctct
ccaccccccggcgccagtggcatggacgtcgactcctgctctgcctctccctgctccagc
cccgcctccttcggctcgttcagcgaagcctcaccgccgccgcttggcggggccatggcc
gagtga
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integrated database retrieval system
