Oncorhynchus mykiss (rainbow trout): 110496267
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Entry
110496267 CDS
T07259
Name
(RefSeq) semaphorin-6D isoform X1
KO
K06842
semaphorin 6
Organism
omy
Oncorhynchus mykiss (rainbow trout)
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Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
Motif
Other DBs
NCBI-GeneID:
110496267
NCBI-ProteinID:
XP_036808733
Ensembl:
ENSOMYG00000027218
UniProt:
A0A8C7VZZ6
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Position
18:complement(41225685..41327540)
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AA seq
1033 aa
AA seq
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MVPPKRMRRRLLLAALALTSCLLSAMATPFPKDLEPINVVGWEHSYLCPGFQGLVSDNDT
ARLGLDFQRMLRINHILYIAARDHVFAVNLTTAGDDFVPQLKLTWRSKDVAKCTVRGRNS
DECYNYVKVLVPRNDETLFACGTNAFNPTCRNYKMTTLEQVGEEVLGQARCPFESGQSNL
GLFAGGDFYSATMTDFLASDAVIYRSLGDDSPVLRTVKYDSKWLREPHFHHAIEYGNYVY
FFLSEIAVEYTTLGKVVFSRVARVCKNDNGGSPRVLERYWTSFLKARLNCSVPGDSFFYF
DVLQSLTNVLQINQRPAVVGVFTTQANSIPGSAVCAFYMDDIEKAFNGKFKEQKTSDSAW
TPVPEEQVPKPRPGSCAGDGPASAYKSSINFPDDTLTFIKSYPLMDEAVPSVNDRPCFTR
TTSRYKLTQIAVDTSAGPSKDRTVVFLGSEDGRVLKVLSSTHPNASFGSQLLEDIDVYNP
SKCNVQGQEDRRILGMELDKEHHALFVAFTSCVIRVPLSRCTEHGACKKSCLSSRDPYCI
WLRTGSCANMAPGFKAGFDQDIEGDHSLYPENCHADVLATTRNQNSAADSAYGVRRLPDM
EKSSPSVHYTLLIACVLVAFFLGAILSGFLVSCYCSHNARRAHRLGKDPEASIHPALSLR
SLAKLNGLLDGQPKEEKLDVSTPKMYSSFIPSGKEHTPERHGMSLGDPDLNLSQGENLSG
LPTPDSTPELPIKNMKAFRNQWERNQNCNNAKESKASPGTGFSLGSSRSVTQQVFPFSHS
LTNGQALGHLPEERKIPNDERAQGASASHSCCPQTVVDVAALDELLKHIYEVSASGSRSI
TVLTSPCAPLPGSSSSSHNHSSFRSQPQIPETESATYYSSSTLPRDSLTRRLDVPPDTAA
SSAGATPLQQQSIPERSAVTRHHSQRHLMIKMGNGGAVPRQHSFRQDGGGPPPHQLLTRM
NSSGGGGGGVGCEVHQPLIPSACLTRQHSYSEPPHLHRAAIVRRTASLKPQVPPKPLFLP
ATSPVNEQGKYNY
NT seq
3102 nt
NT seq
+upstream
nt +downstream
nt
atggtccctccgaaacggatgaggaggcgtctcctgctggcagccctcgcactcacttcc
tgtctactgtccgccatggccacgcccttccccaaggacctggagccaatcaacgttgtc
ggatgggagcactcctacctatgcccagggttccaggggctggtgtcggacaatgacaca
gccagactaggcctggacttccagaggatgctgaggatcaatcacatactctacattgct
gccagggaccatgtctttgcagttaacctgaccacagctggtgacgacttcgtcccccag
ctgaagctcacatggaggtccaaggatgtggccaagtgtaccgtgaggggtagaaacagt
gatgagtgctacaactatgtcaaagtgctggtaccgcggaacgatgagaccctgtttgct
tgcggcaccaatgccttcaaccccacctgccgcaactacaagatgaccaccctggagcag
gttggcgaagaggtgttgggtcaggcgcgctgtcccttcgagtcgggccaatccaacctt
ggcctctttgctggtggtgatttctactctgccaccatgaccgacttcctggccagcgac
gctgtcatctaccgtagtcttggcgacgacagccccgtcctgcggaccgtcaagtacgac
tccaagtggctccgagagccccatttccaccatgcgatcgagtatgggaattatgtctac
ttcttcctcagtgagattgcagtggagtacaccaccctgggcaaggtggtgttctctcgt
gtggcgcgggtgtgtaagaacgacaacggcggctctcctcgggtgctggagcgctactgg
acctccttcctgaaggcgcggctcaactgctcggtgcccggcgactccttcttctacttc
gacgtgctgcagtcactcaccaacgtgctgcagatcaaccagcgccccgcagtggtggga
gtgttcactacgcaagctaacagtatccctggctcagcagtgtgtgccttctacatggac
gacatagagaaggccttcaatgggaagtttaaggagcagaagaccagtgactcagcctgg
accccggtaccggaggaacaggtgcctaagcccaggcctggttcctgtgccggggatggc
ccggcctcggcctacaagtcatccatcaacttccccgacgacacgctgacattcatcaag
tcttacccgctgatggacgaggcggtgccctccgtcaacgaccggccctgcttcacccgc
accaccagcaggtacaagctgactcagattgcggtggacacctctgccgggccgtctaag
gaccgcactgtagtctttctgggctctgaggatggcagggtcctgaaggtgttgtccagc
actcatcctaacgcctcctttggctcccaactcttggaggacattgatgtctataacccc
tctaagtgcaacgttcaggggcaggaggacaggaggattctgggaatggagctggataag
gagcatcatgccttgttcgtggccttcaccagctgtgtcatcagagtaccactcagccgc
tgcaccgagcacggcgcctgcaaaaagagttgtctgtcgtcccgcgacccgtactgcatc
tggctccggactgggagctgtgccaacatggcgccagggttcaaggctggctttgaccag
gacatcgagggagaccactcactgtaccctgaaaactgccacgcagatgtgctggcgacc
acacgaaaccagaactccgcggcagactcggcctacggtgtccgaaggctccctgacatg
gagaagtccagccccagcgtccactacaccctcctgatcgcctgcgttctggtggccttc
ttcctcggcgccatcctctccggcttcctggtgtcatgctactgcagtcacaacgcccgc
cgtgcccaccggcttggcaaggaccccgaggcgtccatccaccccgccctctcgttgcgc
agcctggccaagctaaacggcctgctggacggccagcccaaagaggagaagctggacgtg
tccacgcccaagatgtacagctccttcattcccagtgggaaggagcacactccagagagg
cacgggatgtccctgggagacccggaccttaacctctcccaaggggagaacctctcgggc
ctgcccaccccagactccaccccggagctgcccatcaagaacatgaaggccttccggaac
cagtgggagagaaaccagaactgcaacaacgccaaggagtccaaggcatcccctggcact
ggcttcagcctgggttcgtcaaggtccgtcacccagcaggtgttccccttctctcacagc
ctgaccaacggccaagccctggggcacctgcctgaggagaggaagatccccaacgatgag
cgtgcgcagggggcttcggcctcccactcctgctgcccgcagacggtggtggacgtggcg
gccctggacgagctcctcaagcacatctacgaggtcagcgcctcgggcagccgcagcatc
actgtgctgacctcaccgtgtgcccccctaccgggtagctccagttccagccataaccac
agcagcttcagatcccagccccagatccctgagacggagtcagccacgtactacagctcc
tccaccctgcccagggacagtctgacccgccgcctggacgtgcccccggacaccgccgcc
tcctcggccggcgccaccccactgcagcagcagtccatccccgagcgaagcgcagtgact
cgtcaccactcccagaggcacttaatgatcaagatgggcaacggaggggccgtcccgcgc
caacacagcttcagacaggacgggggtgggccacctccccaccaactgctcacccggatg
aactcgtcaggtggtggtgggggaggggtcggctgtgaggtccaccagccgctcatcccc
agtgcctgcctgacacggcagcacagctacagcgaaccaccccaccttcaccgcgcagcc
atcgtacgccgcacggcctccctcaagccccaagtgccccccaagcccctcttcctgcct
gccacttcgcccgtaaatgagcaaggcaagtacaactactga
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