KEGG   Oncorhynchus mykiss (rainbow trout): 110496267
Entry
110496267         CDS       T07259                                 
Name
(RefSeq) semaphorin-6D isoform X1
  KO
K06842  semaphorin 6
Organism
omy  Oncorhynchus mykiss (rainbow trout)
SSDB
Motif
Pfam: Sema PSI
Other DBs
NCBI-GeneID: 110496267
NCBI-ProteinID: XP_036808733
Ensembl: ENSOMYG00000027218
UniProt: A0A8C7VZZ6
LinkDB
Position
18:complement(41225685..41327540)
AA seq 1033 aa
MVPPKRMRRRLLLAALALTSCLLSAMATPFPKDLEPINVVGWEHSYLCPGFQGLVSDNDT
ARLGLDFQRMLRINHILYIAARDHVFAVNLTTAGDDFVPQLKLTWRSKDVAKCTVRGRNS
DECYNYVKVLVPRNDETLFACGTNAFNPTCRNYKMTTLEQVGEEVLGQARCPFESGQSNL
GLFAGGDFYSATMTDFLASDAVIYRSLGDDSPVLRTVKYDSKWLREPHFHHAIEYGNYVY
FFLSEIAVEYTTLGKVVFSRVARVCKNDNGGSPRVLERYWTSFLKARLNCSVPGDSFFYF
DVLQSLTNVLQINQRPAVVGVFTTQANSIPGSAVCAFYMDDIEKAFNGKFKEQKTSDSAW
TPVPEEQVPKPRPGSCAGDGPASAYKSSINFPDDTLTFIKSYPLMDEAVPSVNDRPCFTR
TTSRYKLTQIAVDTSAGPSKDRTVVFLGSEDGRVLKVLSSTHPNASFGSQLLEDIDVYNP
SKCNVQGQEDRRILGMELDKEHHALFVAFTSCVIRVPLSRCTEHGACKKSCLSSRDPYCI
WLRTGSCANMAPGFKAGFDQDIEGDHSLYPENCHADVLATTRNQNSAADSAYGVRRLPDM
EKSSPSVHYTLLIACVLVAFFLGAILSGFLVSCYCSHNARRAHRLGKDPEASIHPALSLR
SLAKLNGLLDGQPKEEKLDVSTPKMYSSFIPSGKEHTPERHGMSLGDPDLNLSQGENLSG
LPTPDSTPELPIKNMKAFRNQWERNQNCNNAKESKASPGTGFSLGSSRSVTQQVFPFSHS
LTNGQALGHLPEERKIPNDERAQGASASHSCCPQTVVDVAALDELLKHIYEVSASGSRSI
TVLTSPCAPLPGSSSSSHNHSSFRSQPQIPETESATYYSSSTLPRDSLTRRLDVPPDTAA
SSAGATPLQQQSIPERSAVTRHHSQRHLMIKMGNGGAVPRQHSFRQDGGGPPPHQLLTRM
NSSGGGGGGVGCEVHQPLIPSACLTRQHSYSEPPHLHRAAIVRRTASLKPQVPPKPLFLP
ATSPVNEQGKYNY
NT seq 3102 nt   +upstreamnt  +downstreamnt
atggtccctccgaaacggatgaggaggcgtctcctgctggcagccctcgcactcacttcc
tgtctactgtccgccatggccacgcccttccccaaggacctggagccaatcaacgttgtc
ggatgggagcactcctacctatgcccagggttccaggggctggtgtcggacaatgacaca
gccagactaggcctggacttccagaggatgctgaggatcaatcacatactctacattgct
gccagggaccatgtctttgcagttaacctgaccacagctggtgacgacttcgtcccccag
ctgaagctcacatggaggtccaaggatgtggccaagtgtaccgtgaggggtagaaacagt
gatgagtgctacaactatgtcaaagtgctggtaccgcggaacgatgagaccctgtttgct
tgcggcaccaatgccttcaaccccacctgccgcaactacaagatgaccaccctggagcag
gttggcgaagaggtgttgggtcaggcgcgctgtcccttcgagtcgggccaatccaacctt
ggcctctttgctggtggtgatttctactctgccaccatgaccgacttcctggccagcgac
gctgtcatctaccgtagtcttggcgacgacagccccgtcctgcggaccgtcaagtacgac
tccaagtggctccgagagccccatttccaccatgcgatcgagtatgggaattatgtctac
ttcttcctcagtgagattgcagtggagtacaccaccctgggcaaggtggtgttctctcgt
gtggcgcgggtgtgtaagaacgacaacggcggctctcctcgggtgctggagcgctactgg
acctccttcctgaaggcgcggctcaactgctcggtgcccggcgactccttcttctacttc
gacgtgctgcagtcactcaccaacgtgctgcagatcaaccagcgccccgcagtggtggga
gtgttcactacgcaagctaacagtatccctggctcagcagtgtgtgccttctacatggac
gacatagagaaggccttcaatgggaagtttaaggagcagaagaccagtgactcagcctgg
accccggtaccggaggaacaggtgcctaagcccaggcctggttcctgtgccggggatggc
ccggcctcggcctacaagtcatccatcaacttccccgacgacacgctgacattcatcaag
tcttacccgctgatggacgaggcggtgccctccgtcaacgaccggccctgcttcacccgc
accaccagcaggtacaagctgactcagattgcggtggacacctctgccgggccgtctaag
gaccgcactgtagtctttctgggctctgaggatggcagggtcctgaaggtgttgtccagc
actcatcctaacgcctcctttggctcccaactcttggaggacattgatgtctataacccc
tctaagtgcaacgttcaggggcaggaggacaggaggattctgggaatggagctggataag
gagcatcatgccttgttcgtggccttcaccagctgtgtcatcagagtaccactcagccgc
tgcaccgagcacggcgcctgcaaaaagagttgtctgtcgtcccgcgacccgtactgcatc
tggctccggactgggagctgtgccaacatggcgccagggttcaaggctggctttgaccag
gacatcgagggagaccactcactgtaccctgaaaactgccacgcagatgtgctggcgacc
acacgaaaccagaactccgcggcagactcggcctacggtgtccgaaggctccctgacatg
gagaagtccagccccagcgtccactacaccctcctgatcgcctgcgttctggtggccttc
ttcctcggcgccatcctctccggcttcctggtgtcatgctactgcagtcacaacgcccgc
cgtgcccaccggcttggcaaggaccccgaggcgtccatccaccccgccctctcgttgcgc
agcctggccaagctaaacggcctgctggacggccagcccaaagaggagaagctggacgtg
tccacgcccaagatgtacagctccttcattcccagtgggaaggagcacactccagagagg
cacgggatgtccctgggagacccggaccttaacctctcccaaggggagaacctctcgggc
ctgcccaccccagactccaccccggagctgcccatcaagaacatgaaggccttccggaac
cagtgggagagaaaccagaactgcaacaacgccaaggagtccaaggcatcccctggcact
ggcttcagcctgggttcgtcaaggtccgtcacccagcaggtgttccccttctctcacagc
ctgaccaacggccaagccctggggcacctgcctgaggagaggaagatccccaacgatgag
cgtgcgcagggggcttcggcctcccactcctgctgcccgcagacggtggtggacgtggcg
gccctggacgagctcctcaagcacatctacgaggtcagcgcctcgggcagccgcagcatc
actgtgctgacctcaccgtgtgcccccctaccgggtagctccagttccagccataaccac
agcagcttcagatcccagccccagatccctgagacggagtcagccacgtactacagctcc
tccaccctgcccagggacagtctgacccgccgcctggacgtgcccccggacaccgccgcc
tcctcggccggcgccaccccactgcagcagcagtccatccccgagcgaagcgcagtgact
cgtcaccactcccagaggcacttaatgatcaagatgggcaacggaggggccgtcccgcgc
caacacagcttcagacaggacgggggtgggccacctccccaccaactgctcacccggatg
aactcgtcaggtggtggtgggggaggggtcggctgtgaggtccaccagccgctcatcccc
agtgcctgcctgacacggcagcacagctacagcgaaccaccccaccttcaccgcgcagcc
atcgtacgccgcacggcctccctcaagccccaagtgccccccaagcccctcttcctgcct
gccacttcgcccgtaaatgagcaaggcaagtacaactactga

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