Oncorhynchus mykiss (rainbow trout): 110496275
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Entry
110496275 CDS
T07259
Name
(RefSeq) GA-binding protein subunit beta-2 isoform X3
KO
K09454
GA-binding protein transcription factor, beta
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omy03000
]
110496275
03029 Mitochondrial biogenesis [BR:
omy03029
]
110496275
Transcription factors [BR:
omy03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Ankyrin only
110496275
Mitochondrial biogenesis [BR:
omy03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Ubiquitas transcription factors
110496275
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_3
Ank_5
ANK_LRRK2
TC1
Motif
Other DBs
NCBI-GeneID:
110496275
NCBI-ProteinID:
XP_021427749
Ensembl:
ENSOMYG00000027458
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All DBs
Position
18:complement(41650577..41662876)
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AA seq
399 aa
AA seq
DB search
MSLVDLGKRLLEAARKGQDDEVRTLMANGAPFTTDWLGTSPLHLAAQHGHYSTAEVLLRA
GVSRDARTKVDRTPLHMAASEGHNVIVDLLVRSGADINAKDMLKMTALHWAAQNGHQRVA
ETLVKHGADVHALSKFDKTPFDIAGDIQNADLMLLLQEGMQNQVNMNAEAGMTGSSAQPQ
FIIQGIPGLPGGVVNLADLLNNINSAGDSEEAIAANSLDPGSIQHMVNEQGQRVITIVTD
QHGNLQTGGLGQPFFVTMQHGQQMLAMPANQVTEEVVEEEPQPPPARKRKLEASANHMDS
GDTEQLQRQLQEANRKAQEYRQQLMCKEQEAEQYRMKLEAMSHSHTNGTSEQEEVVEEEE
EEVVVLQEGDIIIKTEELDSAEEQVTLVESVPSHTVVIS
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctggtggatttggggaagcggctccttgaggctgcacggaaaggccaggatgat
gaagtcaggacactcatggccaatggggctcccttcaccacagactggctgggcacatct
ccgttgcacctggccgcccaacacgggcactattccactgccgaggtgctgctcagggca
ggcgtcagcagggatgcccgaaccaaagtggacaggacccctctgcacatggctgcttca
gagggccacaatgtcatcgtggatctattagtcaggagtggcgcagacattaatgccaag
gacatgctgaagatgactgctctccactgggccgcccagaatggccaccaaagggtagcg
gagacgctcgtgaaacatggcgccgatgttcacgctctcagtaaatttgataagacgccg
tttgacatcgcaggagacatccagaatgcagaccttatgctcctactacaggagggaatg
cagaaccaggtgaacatgaacgcagaggctggcatgacggggagctcggcccagcctcag
tttatcatccagggcatcccagggctcccggggggtgtggtcaacctggcagacctcctc
aacaacatcaactcggcaggtgactctgaggaagccatagcagccaattctttggacccc
ggcagcatccagcacatggtgaacgagcaaggtcaaagggttatcaccatagtgaccgac
caacacggtaacctacagactggagggcttggtcagccattctttgtcaccatgcagcat
ggacaacagatgttggcgatgccagccaatcaggtgacagaggaggtggttgaggaggaa
ccccagcccccgcctgcccgcaagaggaaactagaggcctctgccaaccacatggattct
ggagacacggagcagttacagaggcagctgcaggaggccaaccggaaggcccaggagtac
cggcagcagctgatgtgcaaagagcaggaagcagaacagtaccgtatgaagctggaggcc
atgtcgcacagccataccaacggcacctctgagcaggaggaagtggttgaggaggaggag
gaggaggtggtggtgctccaggagggagacatcatcattaagacggaggagctggactcg
gctgaggagcaggtgacgctggtggagtcggtgccctcccacaccgtggtcatctcataa
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