Oncorhynchus mykiss (rainbow trout): 110496356
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Entry
110496356 CDS
T07259
Name
(RefSeq) rho guanine nucleotide exchange factor 2 isoform X1
KO
K12791
Rho guanine nucleotide exchange factor 2
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
110496356
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omy04131
]
110496356
Membrane trafficking [BR:
omy04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
110496356
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_16
RhoGEF
C1_1
C1_2
SOS1_NGEF_PH
PH
Pinin_SDK_N
Prok-RING_1
PHDvar_NSD
PHD
TMF_TATA_bd
Motif
Other DBs
NCBI-GeneID:
110496356
NCBI-ProteinID:
XP_036808801
Ensembl:
ENSOMYG00000028629
LinkDB
All DBs
Position
18:44767605..44847112
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AA seq
1182 aa
AA seq
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MPTIPPSSLDAHPPAFPPFSFTTPPAPPCSPYPSPPCSPGPGVKGIGGSGGVTLRSPATR
HLTHLDPWRRHSWEPGAVVTVQQQGMEPSDNHSVSLENLDPEEMEKVLGVALGVRRVGRN
PITQEGSLSSLTEEEAGSDLQHYSVLEEQSNQLQGCSASAPTLSVVRRSNPPSTGLRPGS
NCYETSPYSQIGGSTQSVDRDLGLLLWGREGNWTEVTRDEAQEEVTGGPFVRTFSFLRKM
AGNLKNKEKERMREREKEARDREARYSNGHLFTSLTVSGTTLCSACNKSITAKEALSCPT
CSVTIHNRCRDTLPNCAKMKQRQQKMALMRNNSALQSVTLRTKTPMMRERPSSAIYHSDN
LRQSLLGSRRGRSGLSLSKSVSTNNIAGNLNDDSPLGLRRILSQSTDSLNFRNRAMSMES
LNDEGEVYYASMLEEMEIEGRDFEADSWSMAVDSGYLQTHRKDIIKRQDVIYELIQTELH
HVRTLRIMERVFRQGMLEEVQLEPGVVHAIFPCLDRLTGIHVRFLAQLLTRRNHSLQTGS
TYNFTIHQLGDVLLEQFSGQCADEMRKTYAEFCSRHLKAVKLYKELLARDKRFQYFIRRV
CRGHLLRRHGVQECILLVTQRITKYPVLIQRILDNTKDNEEEASCLTQSLTQIRELLSSV
DQQVMELERTHRLQEIRARLDPRVEAKVRDGGLFRGGELLRRRLIHEGTLLWKTPGSRLK
DVQVLLMTDILVFLQEKDQRFIFPCLDKSPVLSLQNLMIREIANQERGLFLISDSSPPEM
YEVHAASKDDKNTWIRIIQHTVSSCPSREEFPLIETEDKALLRRLKADIQQKDREVLELL
QERVTLFSDLAEVTGGQEVMLPGGPNSRNLFRADTPHAPLGERLLTDAIAEVDRLSELLL
GSTFEMPLPCSFNGHPNHTGALVINGQEVVVNGTHGSPAAKDRNVNQTGDRPSTEEAYQR
LVNLSAYLHALQGTVIKQDSILELCLRSEGPPVDTPTTPTGRVWHSLSRDAGMAEASTGV
AIGELALLQRQHSLLQEELSRLRGTEGRLRDSEKARAQLERQVRDMKAHSATMMDSVGTA
GSEQAPPLRRASETNADTQLASQESIEHLEGHHDGSDLEVEVTSDEEEEEAKASPRSESP
HDLQDIPEESEAKAELPREPDVSHCSPTLKNRPTRTTELNLK
NT seq
3549 nt
NT seq
+upstream
nt +downstream
nt
atgccgaccatccctccctcttccctcgacgcccacccaccagctttcccgcccttttcc
tttaccacaccacccgcccccccctgttccccgtacccctccccaccatgctctccaggg
cctggggtgaaggggattggagggtccggaggggtgaccctgcgttctccagccactcgt
cacctcacccacctggacccctggaggaggcatagctgggagcccggggctgtggtgaca
gtgcagcagcaggggatggagcccagcgacaaccacagtgtgagtctggagaacctggat
ccggaggagatggagaaggttctgggagtggcgctgggcgtccggcgagtgggcaggaac
cccatcactcaggagggctccttgtcttccctcacggaggaggaggcagggtccgatctg
cagcactactccgtattggaggaacagtccaaccagctgcagggctgcagtgcgtcagcc
ccaaccctcagtgtggttcgtcgcagcaaccctcccagcacgggcctccgaccaggctcc
aactgctacgagacttcaccctacagtcaaattggaggatccacacagagtgtggatagg
gacctgggtcttctgctctgggggagagagggaaactggacggaggtcacgagagacgag
gcccaggaggaggtgacaggcggcccttttgtgcgcaccttcagtttcctacgcaagatg
gccggcaacctcaagaataaggagaaggaacgcatgagggagagggagaaggaggcgcgg
gacagggaggcgcgctacagcaacgggcatctcttcacctccctcaccgtgtcggggacc
accctctgttcagcatgcaacaagagcatcactgccaaggaggccctcagctgccccacc
tgcagtgtaactatccacaaccgctgtcgagacacgttgccaaactgtgccaaaatgaaa
cagaggcaacagaagatggctctcatgaggaacaactcagctctgcagagcgtgaccctt
cgtaccaaaacccccatgatgagggaacgccccagctctgccatctaccactctgacaat
ctccgccaatccttgctgggctcgcgccgcggacgctccggcctttccctctccaagagt
gtctccaccaataacattgcagggaacctgaatgatgactctcccttggggctgcgcagg
atcctgtcccagtccacagactcgctcaacttcaggaacagagctatgtccatggagtcg
ctcaacgacgagggagaagtgtactacgcctccatgctggaggaaatggagattgagggg
cgggattttgaggcggactcatggagcatggcggtggactcgggctacctgcagacgcat
cgcaaagacatcatcaaaaggcaggatgtcatctatgagctgatccagacagagctgcac
cacgtgcggacacttcgcattatggagcgggtgttccgccagggcatgctggaggaggtg
cagctggagccgggcgtggtgcacgccatcttcccctgcctggaccgcctcactggcatc
catgtacgcttcctggcacagctgctcacacggcgcaaccacagcctgcagactggcagc
acctacaacttcactatccaccagctgggagatgtgctgctggaacagttctcgggccag
tgtgctgacgagatgagaaagacctacgctgagttctgcagccgccacctgaaggctgtc
aagctgtacaaggagctgctggccagagacaagaggttccagtacttcataaggcgggtg
tgtcggggtcacctgttgcgtcgccatggcgtccaggagtgcatcctgttggtcactcaa
cgcatcaccaagtaccctgtcctcatccagcgtatccttgacaacaccaaggacaatgaa
gaggaggcctcctgtctgacccagtctctgacccagatcagggagctacttagctcagtg
gaccagcaggtgatggagctggagcggactcatcggctgcaggagatccgggccaggctg
gacccacgggtcgaggccaaggtgagggacgggggcctgttcaggggaggagagttgctc
cgcaggagactcatccatgagggaacgctgctctggaagacccctgggtccaggctcaaa
gatgtgcaggtcctgctgatgacagacatcctagtgttcctacaggaaaaagaccagagg
ttcatcttcccttgtctagacaagtctccggtcctctccctgcagaacctcatgattagg
gagatagccaatcaggagcgagggctcttcctcatcagtgactcctctcctccggagatg
tacgaggtccatgctgcctcaaaagatgacaagaacacctggatacgcatcatacagcac
actgtcagcagttgtccttccagggaagagttcccactcatagagactgaagataaggcc
cttctgagacgactgaaagcggacatccagcagaaggaccgggaggtgctggagctgctc
caggagcgggtcacattgttctcggacctggctgaggtgacggggggtcaggaggtcatg
ctgccggggggccccaactcccggaacctgttccgggccgacacgccccatgcgccactc
ggcgagagattgctcactgatgccatcgcagaggtggataggctgagtgagctactcctg
ggctccacctttgaaatgcctctgccctgcagtttcaacggtcacccgaaccacacaggg
gcgctagtgatcaacggtcaggaggtggttgtcaatggaacgcacgggtccccagcagca
aaggaccggaatgtgaatcagactggagataggccctcaactgaggaagcgtatcagagg
ctggtcaaccttagtgcctaccttcatgccctccagggcaccgtgatcaagcaggactcc
atcctggagctctgcctgcgctctgaaggcccaccagtcgataccccgaccacgcccacc
ggacgggtctggcactccctgtcacgtgacgcgggcatggctgaggccagcacgggggtg
gccatcggggagctggccctgctccagaggcagcacagcctcctgcaggaggagctcagt
aggctgcggggtaccgagggccgcctgagggatagcgaaaaggcccgcgcccagctggag
aggcaggtccgcgacatgaaggcccacagtgccactatgatggacagtgtgggaactgca
ggctcagagcaggctccaccccttcgcagagcaagtgaaaccaacgcagacacccaattg
gccagccaggagtcaatcgagcatttggaagggcatcatgatggcagtgacctggaggtg
gaggtgacgtcagatgaggaggaggaggaggccaaagcatcaccgcgctcagagagtccc
catgatcttcaggacattccagaggagagtgaagccaaagcagaactaccacgagagcct
gacgtgtcacactgctcccctactctcaaaaataggccgacgaggacaacagaactgaac
ttgaaatag
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integrated database retrieval system
